Molecular characterization of multidrug-resistant extended-spectrum β-lactamase-producing Enterobacteriaceae isolated in Antananarivo, Madagascar

BMC Microbiology

Volumn 13, Issue 1, 2013, Pages

  Rakotonirina, Hanitra C ^a,d   Garin, Benoît ^a   Randrianirina, Frédérique ^a   Richard, Vincent ^a,b   Talarmin, Antoine ^a,c   Arlet, Guillaume ^d,e  

^a INSTITUT PASTEUR DE MADAGASCAR   (Madagascar)

^b INSTITUT PASTEUR DE DAKAR   (Senegal)

^c Institut Pasteur de Guadeloupe   (Guadeloupe)

^d SORBONNE UNIVERSITÉ   (France)

^e HÔPITAL TENON   (France)

Author keywords

[No Author keywords available]

Indexed keywords

AMINOGLYCOSIDE; BETA LACTAMASE CTX M; BETA LACTAMASE CTX M 15; BETA LACTAMASE OXA1; BETA LACTAMASE SHV 12; BETA LACTAMASE TEM 1; COTRIMOXAZOLE; EXTENDED SPECTRUM BETA LACTAMASE; QUINOLINE DERIVED ANTIINFECTIVE AGENT; UNCLASSIFIED DRUG;

AAC(6') IB CR GENE; AAC(6') IB GENE; AADA5 GENE; ANTIBIOTIC RESISTANCE; ANTIBIOTIC SENSITIVITY; ARTICLE; BACTERIAL GENE; BACTERIAL VIRULENCE; BACTERIUM ISOLATE; BACTERIUM ISOLATION; CATB 3 GENE; CONJUGATION; CONTROLLED STUDY; DFRA17 GENE; ENTEROBACTER CLOACAE; ESCHERICHIA COLI; EXTENDED SPECTRUM BETA LACTAMASE PRODUCING ENTEROBACTERIACEAE; FYUA GENE; GENE AMPLIFICATION; GENE CASSETTE; GENE INSERTION SEQUENCE; GENE SEQUENCE; GENOTYPE; IHA GENE; INTEGRON; IUTA GENE; KLEBSIELLA OXYTOCA; KLEBSIELLA PNEUMONIAE; MADAGASCAR; NONHUMAN; PHYLOGENY; PLASMID; POLYMERASE CHAIN REACTION; QNRA GENE; QNRB GENE; REPLICON; SFA GENE; SUL 1 GENE; SUL 2 GENE; TETA GENE; TRAT GENE;

ANTI-BACTERIAL AGENTS; BETA-LACTAMASES; CLUSTER ANALYSIS; COMMUNITY-ACQUIRED INFECTIONS; CONJUGATION, GENETIC; CROSS INFECTION; DRUG RESISTANCE, MULTIPLE, BACTERIAL; ENTEROBACTERIACEAE; ENTEROBACTERIACEAE INFECTIONS; GENES, BACTERIAL; HUMANS; INTEGRONS; MADAGASCAR; MICROBIAL SENSITIVITY TESTS; MOLECULAR EPIDEMIOLOGY; MOLECULAR TYPING; PHYLOGENY; PLASMIDS; POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; TRANSFORMATION, BACTERIAL;

ENTEROBACTERIACEAE;

EID: 84876920298     PISSN: None     EISSN: 14712180     Source Type: Journal    
DOI: 10.1186/1471-2180-13-85     Document Type: Article

References (46)

1. Extended-spectrum beta-lactamases in the 21st century: characterization, epidemiology, and detection of this important resistance threat. Bradford PA, Clin Microbiol Rev 2001 14 933 951 table of contents 10.1128/CMR.14.4.933-951. 2001 11585791
2. Complete nucleotide sequence of a 92-kilobase plasmid harboring the CTX-M-15 extended-spectrum beta-lactamase involved in an outbreak in long-term-care facilities in Toronto, Canada. Boyd DA, Tyler S, Christianson S, McGeer A, Muller MP, Antimicrob Agents Chemother 2004 48 3758 3764 10.1128/AAC.48.10.3758-3764.2004 15388431
3. Evolution of plasmid-coded resistance to broad-spectrum cephalosporins. Kliebe C, Nies BA, Meyer JF, Tolxdorff-Neutzling RM, Wiedemann B, Antimicrob Agents Chemother 1985 28 302 307 10.1128/AAC.28.2.302 3879659
4. Plasmid-mediated resistance to third-generation cephalosporins caused by point mutations in TEM-type penicillinase genes. Sougakoff W, Goussard S, Gerbaud G, Courvalin P, Rev Infect Dis 1988 10 879 884 10.1093/clinids/10.4.879 3055179
5. Extended-spectrum beta-lactamase-producing Enterobacteriaceae: an emerging public-health concern. Pitout JD, Laupland KB, Lancet Infect Dis 2008 8 159 166 10.1016/S1473-3099(08)70041-0 18291338
6. Growing group of extended-spectrum beta-lactamases: the CTX-M enzymes. Bonnet R, Antimicrob Agents Chemother 2004 48 1 14 10.1128/AAC.48.1.1-14.2004 14693512
7. Beta-lactamases of Kluyvera ascorbata, probable progenitors of some plasmid-encoded CTX-M types. Humeniuk C, Arlet G, Gautier V, Grimont P, Labia R, Antimicrob Agents Chemother 2002 46 3045 3049 10.1128/AAC.46.9.3045-3049.2002 12183268
8. Dissemination of clonally related Escherichia coli strains expressing extended-spectrum beta-lactamase CTX-M-15. Coque TM, Novais A, Carattoli A, Poirel L, Pitout J, Emerg Infect Dis 2008 14 195 200 10.3201/eid1402.070350 18258110
9. Chromosome-encoded Ambler class A beta-lactamase of Kluyvera georgiana, a probable progenitor of a subgroup of CTX-M extended-spectrum beta-lactamases. Poirel L, Kampfer P, Nordmann P, Antimicrob Agents Chemother 2002 46 4038 4040 10.1128/AAC.46.12.4038-4040.2002 12435721
10. Resistance plasmid families in Enterobacteriaceae. Carattoli A, Antimicrob Agents Chemother 2009 53 2227 2238 10.1128/AAC.01707-08 19307361
11. Genetic support of extended-spectrum beta-lactamases. Poirel L, Naas T, Nordmann P, Clin Microbiol Infect 2008 14 Suppl 1 75 81 18154530
12. The link between phylogeny and virulence in Escherichia coli extraintestinal infection. Picard B, Garcia JS, Gouriou S, Duriez P, Brahimi N, Infect Immun 1999 67 546 553 9916057
13. Rapid and simple determination of the Escherichia coli phylogenetic group. Clermont O, Bonacorsi S, Bingen E, Appl Environ Microbiol 2000 66 4555 4558 10.1128/AEM.66.10.4555-4558.2000 11010916
14. Intercontinental emergence of Escherichia coli clone O25:H4-ST131 producing CTX-M-15. Nicolas-Chanoine MH, Blanco J, Leflon-Guibout V, Demarty R, Alonso MP, J Antimicrob Chemother 2008 61 273 281 18077311
15. Escherichia coli O25b-ST131: a pandemic, multiresistant, community-associated strain. Rogers BA, Sidjabat HE, Paterson DL, J Antimicrob Chemother 2011 66 1 14 10.1093/jac/dkq415 21081548
16. Emergence and outbreaks of CTX-M beta-lactamase-producing Escherichia coli and Klebsiella pneumoniae strains in a Tunisian hospital. Mamlouk K, Boutiba-Ben Boubaker I, Gautier V, Vimont S, Picard B, J Clin Microbiol 2006 44 4049 4056 10.1128/JCM.01076-06 16957046
17. High prevalence of CTX-M-15-producing Klebsiella pneumoniae isolates in Asian countries: diverse clones and clonal dissemination. Lee MY, Ko KS, Kang CI, Chung DR, Peck KR, Int J Antimicrob Agents 2011 38 160 163 10.1016/j.ijantimicag.2011.03.020 21605960
18. Dissemination of CTX-M-type beta-lactamases among clinical isolates of Enterobacteriaceae in Paris, France. Eckert C, Gautier V, Saladin-Allard M, Hidri N, Verdet C, Antimicrob Agents Chemother 2004 48 1249 1255 10.1128/AAC.48.4.1249-1255.2004 15047527
19. Antimicrobial resistance among uropathogens that cause community-acquired urinary tract infections in Antananarivo, Madagascar. Randrianirina F, Soares JL, Carod JF, Ratsima E, Thonnier V, J Antimicrob Chemother 2007 59 309 312 17138569
20. Role of contaminated aspiration tubes in nosocomial outbreak of Klebsiella pneumoniae producing SHV-2 and CTX-M-15 extended-spectrum beta-lactamases. Randrianirina F, Vedy S, Rakotovao D, Ramarokoto CE, Ratsitohaina H, J Hosp Infect 2009 72 23 29 10.1016/j.jhin.2009.02.004 19282056
21. Antimicrobial resistance in pathogens causing nosocomial infections in surgery and intensive care units of two hospitals in Antananarivo, Madagascar. Randrianirina F, Vaillant L, Ramarokoto CE, Rakotoarijaona A, Andriamanarivo ML, J Infect Dev Ctries 2010 4 74 82 20212337
22. High prevalence of fecal carriage of extended-spectrum beta-lactamase-producing Escherichia coli and Klebsiella pneumoniae in a pediatric unit in Madagascar. Andriatahina T, Randrianirina F, Hariniana ER, Talarmin A, Raobijaona H, BMC Infect Dis 2010 10 204 10.1186/1471-2334-10-204 20624313
23. Characterization and molecular epidemiology of extended-spectrum beta-lactamases in clinical isolates of Enterobacteriaceae in a Tunisian University Hospital. Dahmen S, Bettaieb D, Mansour W, Boujaafar N, Bouallegue O, Microb Drug Resist 2010 16 163 170 10.1089/mdr.2009.0108 20438347
24. The worldwide emergence of plasmid-mediated quinolone resistance. Robicsek A, Jacoby GA, Hooper DC, Lancet Infect Dis 2006 6 629 640 10.1016/S1473-3099(06)70599-0 17008172
25. Fluoroquinolone-modifying enzyme: a new adaptation of a common aminoglycoside acetyltransferase. Robicsek A, Strahilevitz J, Jacoby GA, Macielag M, Abbanat D, Nat Med 2006 12 83 88 10.1038/nm1347 16369542
26. Prevalence in the United States of aac(6')-Ib-cr encoding a ciprofloxacin-modifying enzyme. Park CH, Robicsek A, Jacoby GA, Sahm D, Hooper DC, Antimicrob Agents Chemother 2006 50 3953 3955 10.1128/AAC.00915-06 16954321
27. Characterization of sulphonamide resistance genes and class 1 integron gene cassettes in Enterobacteriaceae, Central African Republic (CAR). Frank T, Gautier V, Talarmin A, Bercion R, Arlet G, J Antimicrob Chemother 2007 59 742 745 10.1093/jac/dkl538 17350987
28. Identification of plasmids by PCR-based replicon typing. Carattoli A, Bertini A, Villa L, Falbo V, Hopkins KL, J Microbiol Methods 2005 63 219 228 10.1016/j.mimet.2005.03.018 15935499
29. Rapid detection of the O25b-ST131 clone of Escherichia coli encompassing the CTX-M-15-producing strains. Clermont O, Dhanji H, Upton M, Gibreel T, Fox A, J Antimicrob Chemother 2009 64 274 277 10.1093/jac/dkp194 19474064
30. Dissemination of multidrug resistant Acinetobacter baumannii in various hospitals of Antananarivo Madagascar. Andriamanantena TS, Ratsima E, Rakotonirina HC, Randrianirina F, Ramparany L, Ann Clin Microbiol Antimicrob 2010 9 17 10.1186/1476-0711-9-17 20591154
31. Rapid dissemination and diversity of CTX-M extended-spectrum beta-lactamase genes in commensal Escherichia coli isolates from healthy children from low-resource settings in Latin America. Pallecchi L, Bartoloni A, Fiorelli C, Mantella A, Di Maggio T, Antimicrob Agents Chemother 2007 51 2720 2725 10.1128/AAC.00026-07 17548490
32. The CTX-M beta-lactamase pandemic. Canton R, Coque TM, Curr Opin Microbiol 2006 9 466 475 10.1016/j.mib.2006.08.011 16942899
33. Rectal carriage of extended-spectrum Beta-lactamase-producing gram-negative bacilli in community settings in madagascar. Herindrainy P, Randrianirina F, Ratovoson R, Ratsima Hariniana E, Buisson Y, PLoS One 2011 6 22738 10.1371/journal.pone.0022738 21829498
34. Survey of Klebsiella pneumoniae strains producing extended-spectrum beta-lactamases: prevalence of SHV-12 and SHV-2a in Korea. Kim J, Kwon Y, Pai H, Kim JW, Cho DT, J Clin Microbiol 1998 36 1446 1449 9574728
35. Clonal dissemination of a CTX-M-15 beta-lactamase-producing Escherichia coli strain in the Paris area, Tunis, and Bangui. Lavollay M, Mamlouk K, Frank T, Akpabie A, Burghoffer B, Antimicrob Agents Chemother 2006 50 2433 2438 10.1128/AAC.00150-06 16801423
36. Emergence and dissemination of Enterobacteriaceae isolates producing CTX-M-1-like enzymes in Spain are associated with IncFII (CTX-M-15) and broad-host-range (CTX-M-1, -3, and -32) plasmids. Novais A, Canton R, Moreira R, Peixe L, Baquero F, Antimicrob Agents Chemother 2007 51 796 799 10.1128/AAC.01070-06 17145793
37. Survey and molecular genetics of SHV beta-lactamases in Enterobacteriaceae in Switzerland: two novel enzymes, SHV-11 and SHV-12. Nuesch-Inderbinen MT, Kayser FH, Hachler H, Antimicrob Agents Chemother 1997 41 943 949 9145849
38. Characterization of ESBL (SHV-12) producing clinical isolate of Enterobacter aerogenes from a tertiary care hospital in Nigeria. Kasap M, Fashae K, Torol S, Kolayli F, Budak F, Ann Clin Microbiol Antimicrob 2010 9 1 10.1186/1476-0711-9-1 20067633
39. Replicon typing of plasmids in Escherichia coli producing extended-spectrum beta-lactamases. Marcade G, Deschamps C, Boyd A, Gautier V, Picard B, J Antimicrob Chemother 2009 63 67 71 18931389
40. Plasmid-mediated quinolone resistance determinants qnr and aac(6')-Ib-cr in extended-spectrum beta-lactamase-producing Escherichia coli and Klebsiella pneumoniae in China. Jiang Y, Zhou Z, Qian Y, Wei Z, Yu Y, J Antimicrob Chemother 2008 61 1003 1006 10.1093/jac/dkn063 18299311
41. Distribution of cotrimoxazole resistance genes associated with class 1 integrons in clinical isolates of Enterobacteriaceae in a university hospital in Tunisia. Dahmen S, Mansour W, Boujaafar N, Arlet G, Bouallegue O, Microb Drug Resist 2010 16 43 47 10.1089/mdr.2009.0091 19958162
42. Variable gene cassette patterns of class 1 integron-associated drug-resistant Escherichia coli in Taiwan. Chang LL, Chang TM, Chang CY, Kaohsiung J Med Sci 2007 23 273 280 10.1016/S1607-551X(09)70409-7 17525011
43. Detection of unrelated Escherichia coli strains harboring genes of CTX-M-15, OXA-1, and AAC(6')-Ib-cr enzymes in a Tunisian hospital and characterization of their integrons and virulence factors. Jouini A, Ben Slama K, Vinue L, Ruiz E, Saenz Y, J Chemother 2010 22 318 323 21123154
44. Phylogenetic and pathotypic similarities between Escherichia coli isolates from urinary tract infections in dogs and extraintestinal infections in humans. Johnson JR, Stell AL, Delavari P, Murray AC, Kuskowski M, J Infect Dis 2001 183 897 906 10.1086/319263 11237806
45. Association of carboxylesterase B electrophoretic pattern with presence and expression of urovirulence factor determinants and antimicrobial resistance among strains of Escherichia coli that cause urosepsis. Johnson JR, Goullet P, Picard B, Moseley SL, Roberts PL, Infect Immun 1991 59 2311 2315 1675626
46. Molecular epidemiology of Escherichia coli producing CTX-M beta-lactamases: the worldwide emergence of clone ST131 O25:H4. Peirano G, Pitout JD, Int J Antimicrob Agents 2011 35 316 321