-
1
-
-
24644515752
-
Tuning genetic control through promoter engineering
-
10.1073/pnas.0504604102 1:CAS:528:DC%2BD2MXhtVWktLnI
-
Alper H, Fischer C, Nevoigt E, Stephanopoulos G (2005) Tuning genetic control through promoter engineering. Proc Natl Acad Sci USA 102:12678-12683
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 12678-12683
-
-
Alper, H.1
Fischer, C.2
Nevoigt, E.3
Stephanopoulos, G.4
-
2
-
-
0030925208
-
Physiology and genetics of the dimorphic fungus Yarrowia lipolytica
-
10.1111/j.1574-6976.1997.tb00299.x 1:CAS:528:DyaK2sXivV2murs%3D
-
Barth G, Gaillardin C (1997) Physiology and genetics of the dimorphic fungus Yarrowia lipolytica. FEMS Microbiol Rev 19:219-237
-
(1997)
FEMS Microbiol Rev
, vol.19
, pp. 219-237
-
-
Barth, G.1
Gaillardin, C.2
-
3
-
-
67349169778
-
Yarrowia lipolytica: A model and a tool to understand the mechanisms implicated in lipid accumulation
-
10.1016/j.biochi.2009.02.004 1:CAS:528:DC%2BD1MXmtVCjt7g%3D
-
Beopoulos A, Chardot T, Nicaud JM (2009) Yarrowia lipolytica: a model and a tool to understand the mechanisms implicated in lipid accumulation. Biochimie 91:692-696
-
(2009)
Biochimie
, vol.91
, pp. 692-696
-
-
Beopoulos, A.1
Chardot, T.2
Nicaud, J.M.3
-
4
-
-
0028012040
-
Two upstream activation sequences control the expression of the XPR2 gene in the yeast Yarrowia lipolytica
-
1:CAS:528:DyaK2cXntVyisg%3D%3D
-
Blanchin-roland S, Otero RRC, Gaillardin C (1994) Two upstream activation sequences control the expression of the XPR2 gene in the yeast Yarrowia lipolytica. Mol Cell Biol 14:327-338
-
(1994)
Mol Cell Biol
, vol.14
, pp. 327-338
-
-
Blanchin-Roland, S.1
Otero, R.R.C.2
Gaillardin, C.3
-
5
-
-
83055177124
-
Tuning gene expression in Yarrowia lipolytica by a hybrid promoter approach
-
10.1128/AEM.05763-11 1:CAS:528:DC%2BC3MXhs1GqtrnL
-
Blazeck J, Liu L, Redden H, Alper H (2011) Tuning gene expression in Yarrowia lipolytica by a hybrid promoter approach. Appl Environ Microbiol 77:7905-7914
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 7905-7914
-
-
Blazeck, J.1
Liu, L.2
Redden, H.3
Alper, H.4
-
6
-
-
84866744379
-
Controlling promoter strength and regulation in Saccharomyces cerevisiae using synthetic hybrid promoters
-
doi: 10.1002/bit.24552
-
Blazeck J, Garg R, Reed B, Alper H (2012) Controlling promoter strength and regulation in Saccharomyces cerevisiae using synthetic hybrid promoters. Biotechnol Bioeng. doi: 10.1002/bit.24552
-
(2012)
Biotechnol Bioeng
-
-
Blazeck, J.1
Garg, R.2
Reed, B.3
Alper, H.4
-
7
-
-
0026599048
-
One step transformation of yeast in stationary phase
-
10.1007/BF00318659 1:CAS:528:DyaK38XhtVams74%3D
-
Chen DC, Yang BC, Kuo TT (1992) One step transformation of yeast in stationary phase. Curr Genet 21:83-84
-
(1992)
Curr Genet
, vol.21
, pp. 83-84
-
-
Chen, D.C.1
Yang, B.C.2
Kuo, T.T.3
-
8
-
-
83055197636
-
-
United States
-
Damude H.G.H., Gillies, Peter John, Macool, Daniel Joseph, Picataggio, Stephen K., Pollak, Dana Walters M., Ragghianti, James John, Xue, Zhixiong, Yadav, Narendra S., Zhang, Hongxiang, Zhu, Quinn Qun. (2006) High eicosapentaenoic acid producing strains of Yarrowia lipolytica, United States
-
(2006)
High Eicosapentaenoic Acid Producing Strains of Yarrowia Lipolytica
-
-
Damude, H.G.H.1
Gillies, P.J.2
Macool, D.J.3
Picataggio, S.K.4
Pollak, D.W.M.5
Ragghianti, J.J.6
Xue, Z.7
Yadav, N.S.8
Zhang, H.9
Zhu, Q.Q.10
-
9
-
-
0002772437
-
Integrative transformation of the yeast Yarrowia lipolytica
-
10.1007/BF00418492 1:CAS:528:DyaL28XhsVGgt78%3D
-
Davidow LS, Apostolakos D, Odonnell MM, Proctor AR, Ogrydziak DM, Wing RA, Stasko I, Dezeeuw JR (1985) Integrative transformation of the yeast Yarrowia lipolytica. Curr Genet 10:39-48
-
(1985)
Curr Genet
, vol.10
, pp. 39-48
-
-
Davidow, L.S.1
Apostolakos, D.2
Odonnell, M.M.3
Proctor, A.R.4
Ogrydziak, D.M.5
Wing, R.A.6
Stasko, I.7
Dezeeuw, J.R.8
-
10
-
-
0020649604
-
The Tac promoter - A functional hybrid derived from the Trp and Lac promoters
-
10.1073/pnas.80.18.5784 1:CAS:528:DyaL3sXosVemsw%3D%3D
-
Deboer HA, Comstock LJ, Vasser M (1983) The Tac promoter - a functional hybrid derived from the Trp and Lac promoters. Proc Natl Acad Sci USA 80:21-25
-
(1983)
Proc Natl Acad Sci USA
, vol.80
, pp. 21-25
-
-
Deboer, H.A.1
Comstock, L.J.2
Vasser, M.3
-
11
-
-
0030001055
-
Activation mechanism of the multifunctional transcription factor repressor-activator protein 1 (Rap1p)
-
1:CAS:528:DyaK28XjtFCqt7c%3D
-
Drazinic CM, Smerage JB, Lopez MC, Baker HV (1996) Activation mechanism of the multifunctional transcription factor repressor-activator protein 1 (Rap1p). Mol Cell Biol 16:3187-3196
-
(1996)
Mol Cell Biol
, vol.16
, pp. 3187-3196
-
-
Drazinic, C.M.1
Smerage, J.B.2
Lopez, M.C.3
Baker, H.V.4
-
12
-
-
0027178449
-
Colocalization of centromeric and replicative functions on autonomously replicating sequences isolated from the yeast Yarrowia lipolytica
-
10.1073/pnas.90.11.4912 1:CAS:528:DyaK3sXkvVyjur4%3D
-
Fournier P, Abbas A, Chasles M, Kudla B, Ogrydziak DM, Yaver D, Xuan JW, Peito A, Ribet AM, Feynerol C, He F, Gaillardin C (1993) Colocalization of centromeric and replicative functions on autonomously replicating sequences isolated from the yeast Yarrowia lipolytica. Proc Natl Acad Sci USA 90:4912-4916
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 4912-4916
-
-
Fournier, P.1
Abbas, A.2
Chasles, M.3
Kudla, B.4
Ogrydziak, D.M.5
Yaver, D.6
Xuan, J.W.7
Peito, A.8
Ribet, A.M.9
Feynerol, C.10
He, F.11
Gaillardin, C.12
-
13
-
-
0023107298
-
LEU2 directed expression of beta-galactosidase activity and phleomycin resistance in Yarrowia lipolytica
-
10.1007/BF00378179 1:CAS:528:DyaL2sXktFyrsbo%3D
-
Gaillardin C, Ribet AM (1987) LEU2 directed expression of beta-galactosidase activity and phleomycin resistance in Yarrowia lipolytica. Curr Genet 11:369-375
-
(1987)
Curr Genet
, vol.11
, pp. 369-375
-
-
Gaillardin, C.1
Ribet, A.M.2
-
14
-
-
0035810693
-
The metabolic burden of the PGK1 and ADH2 promoter systems for heterologous xylanase production by Saccharomyces cerevisiae in defined medium
-
10.1002/bit.1056 1:CAS:528:DC%2BD3MXivFyjsbg%3D
-
Gorgens JF, van Zyl WH, Knoetze JH, Hahn-Hagerdal B (2001) The metabolic burden of the PGK1 and ADH2 promoter systems for heterologous xylanase production by Saccharomyces cerevisiae in defined medium. Biotechnol Bioeng 73:238-245
-
(2001)
Biotechnol Bioeng
, vol.73
, pp. 238-245
-
-
Gorgens, J.F.1
Van Zyl, W.H.2
Knoetze, J.H.3
Hahn-Hagerdal, B.4
-
15
-
-
0031965086
-
The sequence of spacers between the consensus sequences modulates the strength of prokaryotic promoters
-
1:CAS:528:DyaK1cXitValsA%3D%3D
-
Jensen PR, Hammer K (1998) The sequence of spacers between the consensus sequences modulates the strength of prokaryotic promoters. Appl Environ Microbiol 64:82-87
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 82-87
-
-
Jensen, P.R.1
Hammer, K.2
-
16
-
-
0345329541
-
The level of glucose-6-phosphate dehydrogenase activity strongly influences xylose fermentation and inhibitor sensitivity in recombinant Saccharomyces cerevisiae strains
-
10.1002/yea.1043 1:CAS:528:DC%2BD3sXpsFCltL4%3D
-
Jeppsson M, Johansson B, Jensen PR, Hahn-Hagerdal B, Gorwa-Grauslund MF (2003) The level of glucose-6-phosphate dehydrogenase activity strongly influences xylose fermentation and inhibitor sensitivity in recombinant Saccharomyces cerevisiae strains. Yeast 20:1263-1272
-
(2003)
Yeast
, vol.20
, pp. 1263-1272
-
-
Jeppsson, M.1
Johansson, B.2
Jensen, P.R.3
Hahn-Hagerdal, B.4
Gorwa-Grauslund, M.F.5
-
17
-
-
0035970087
-
Vectors for gene expression and amplification in the yeast Yarrowia lipolytica
-
10.1002/1097-0061(20010130)18:2<97: AID-YEA652>3.0.CO;2-U 1:CAS:528:DC%2BD3MXht1SlsLk%3D
-
Juretzek T, Le Dall MT, Mauersberger S, Gaillardin C, Barth G, Nicaud JM (2001) Vectors for gene expression and amplification in the yeast Yarrowia lipolytica. Yeast 18:97-113
-
(2001)
Yeast
, vol.18
, pp. 97-113
-
-
Juretzek, T.1
Le Dall, M.T.2
Mauersberger, S.3
Gaillardin, C.4
Barth, G.5
Nicaud, J.M.6
-
18
-
-
0020689671
-
Sequence of the lacZ gene of Escherichia coli
-
1:CAS:528:DyaL3sXktVWisLg%3D
-
Kalnins A, Otto K, Ruther U, Mullerhill B (1983) Sequence of the lacZ gene of Escherichia coli. EMBO J 2:593-597
-
(1983)
EMBO J
, vol.2
, pp. 593-597
-
-
Kalnins, A.1
Otto, K.2
Ruther, U.3
Mullerhill, B.4
-
19
-
-
0028287703
-
Multiple-copy integration in the yeast Yarrowia lipolytica
-
10.1007/BF00326302 1:CAS:528:DyaK2cXltVWitLY%3D
-
Ledall MT, Nicaud JM, Gaillardin C (1994) Multiple-copy integration in the yeast Yarrowia lipolytica. Curr Genet 26:38-44
-
(1994)
Curr Genet
, vol.26
, pp. 38-44
-
-
Ledall, M.T.1
Nicaud, J.M.2
Gaillardin, C.3
-
20
-
-
84896694137
-
From pathways to genomes and beyond: The metabolic engineering toolbox and its place in biofuels production
-
10.1515/green.2011.006
-
Liu L, Reed B, Alper H (2011) From pathways to genomes and beyond: the metabolic engineering toolbox and its place in biofuels production. Green 1:81-95
-
(2011)
Green
, vol.1
, pp. 81-95
-
-
Liu, L.1
Reed, B.2
Alper, H.3
-
21
-
-
0032898514
-
Functional analysis of upstream regulating regions from the Yarrowia lipolytica XPR2 promoter
-
10.1099/13500872-145-1-75 1:CAS:528:DyaK1MXmtlektQ%3D%3D
-
Madzak C, Blanchin-Roland S, Otero RRC, Gaillardin C (1999) Functional analysis of upstream regulating regions from the Yarrowia lipolytica XPR2 promoter. Microbiology 145:75-87
-
(1999)
Microbiology
, vol.145
, pp. 75-87
-
-
Madzak, C.1
Blanchin-Roland, S.2
Otero, R.R.C.3
Gaillardin, C.4
-
22
-
-
0344002683
-
Strong hybrid promoters and integrative expression/secretion vectors for quasi-constitutive expression of heterologous proteins in the yeast Yarrowia lipolytica
-
1:CAS:528:DC%2BD3cXislWju78%3D
-
Madzak C, Treton B, Blanchin-Roland S (2000) Strong hybrid promoters and integrative expression/secretion vectors for quasi-constitutive expression of heterologous proteins in the yeast Yarrowia lipolytica. J Mol Microbiol Biotechnol 2:207-216
-
(2000)
J Mol Microbiol Biotechnol
, vol.2
, pp. 207-216
-
-
Madzak, C.1
Treton, B.2
Blanchin-Roland, S.3
-
23
-
-
1842530397
-
Heterologous protein expression and secretion in the non-conventional yeast Yarrowia lipolytica: A review
-
10.1016/j.jbiotec.2003.10.027 1:CAS:528:DC%2BD2cXivVKmsL4%3D
-
Madzak C, Gaillardin C, Beckerich JM (2004) Heterologous protein expression and secretion in the non-conventional yeast Yarrowia lipolytica: a review. J Biotechnol 109:63-81
-
(2004)
J Biotechnol
, vol.109
, pp. 63-81
-
-
Madzak, C.1
Gaillardin, C.2
Beckerich, J.M.3
-
24
-
-
0027523226
-
Analysis of regions essential for the function of chromosomal replicator sequences from Yarrowia lipolytica
-
1:CAS:528:DyaK3sXisV2jtLo%3D
-
Matsuoka M, Matsubara M, Daidoh H, Imanaka T, Uchida K, Aiba S (1993) Analysis of regions essential for the function of chromosomal replicator sequences from Yarrowia lipolytica. Mol Gen Genet 237:327-333
-
(1993)
Mol Gen Genet
, vol.237
, pp. 327-333
-
-
Matsuoka, M.1
Matsubara, M.2
Daidoh, H.3
Imanaka, T.4
Uchida, K.5
Aiba, S.6
-
25
-
-
0003785155
-
-
Cold Spring Harbor Laboratory, [Cold Spring Harbor, N.Y.]
-
Miller J.H. (1972) Experiments in molecular genetics. Cold Spring Harbor Laboratory, [Cold Spring Harbor, N.Y.]
-
(1972)
Experiments in Molecular Genetics
-
-
Miller, J.H.1
-
26
-
-
84876679704
-
-
GREEN CROSS CORPORATION (3-3, Imabashi 1-chome Chuo-ku, Osaka-shi, Osaka, JP), Europe
-
Mukai H., Horii H., Tsujikawa M., Kawabe H., Arimura H., Suyama T. (1992) Yeast promoter and process for preparing heterologous protein, GREEN CROSS CORPORATION (3-3, Imabashi 1-chome Chuo-ku, Osaka-shi, Osaka, JP), Europe
-
(1992)
Yeast Promoter and Process for Preparing Heterologous Protein
-
-
Mukai, H.1
Horii, H.2
Tsujikawa, M.3
Kawabe, H.4
Arimura, H.5
Suyama, T.6
-
27
-
-
0031657285
-
Comparison of expression systems in the yeasts Saccharomyces cerevisiae, Hansenula polymorpha, Klyveromyces lactis. Schizosaccharomyces pombe and Yarrowia lipolytica. Cloning of two novel promoters from Yarrowia lipolytica
-
10.1002/(SICI)1097-0061(1998100)14:14<1267: AID-YEA327>3.0.CO;2-2 1:CAS:528:DyaK1cXmslKntbs%3D
-
Muller S, Sandal T, Kamp-Hansen P, Dalboge H (1998) Comparison of expression systems in the yeasts Saccharomyces cerevisiae, Hansenula polymorpha, Klyveromyces lactis. Schizosaccharomyces pombe and Yarrowia lipolytica. Cloning of two novel promoters from Yarrowia lipolytica. Yeast 14:1267-1283
-
(1998)
Yeast
, vol.14
, pp. 1267-1283
-
-
Muller, S.1
Sandal, T.2
Kamp-Hansen, P.3
Dalboge, H.4
-
28
-
-
0028953840
-
Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds
-
10.1016/0378-1119(95)00037-7 1:CAS:528:DyaK2MXkvVamsb4%3D
-
Mumberg D, Muller R, Funk M (1995) Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds. Gene 156:119-122
-
(1995)
Gene
, vol.156
, pp. 119-122
-
-
Mumberg, D.1
Muller, R.2
Funk, M.3
-
29
-
-
33747376106
-
Engineering of promoter replacement cassettes for fine-tuning of gene expression in Saccharomyces cerevisiae
-
10.1128/AEM.00530-06 1:CAS:528:DC%2BD28XosVKlsrY%3D
-
Nevoigt E, Kohnke J, Fischer CR, Alper H, Stahl U, Stephanopoulos G (2006) Engineering of promoter replacement cassettes for fine-tuning of gene expression in Saccharomyces cerevisiae. Appl Environ Microbiol 72:5266-5273
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 5266-5273
-
-
Nevoigt, E.1
Kohnke, J.2
Fischer, C.R.3
Alper, H.4
Stahl, U.5
Stephanopoulos, G.6
-
30
-
-
0036052123
-
Protein expression and secretion in the yeast Yarrowia lipolytica
-
1:CAS:528:DC%2BD38XmtlehsLY%3D
-
Nicaud JM, Madzak C, van den Broek P, Gysler C, Duboc P, Niederberger P, Gaillardin C (2002) Protein expression and secretion in the yeast Yarrowia lipolytica. Fems Yeast Res 2:371-379
-
(2002)
Fems Yeast Res
, vol.2
, pp. 371-379
-
-
Nicaud, J.M.1
Madzak, C.2
Van Den Broek, P.3
Gysler, C.4
Duboc, P.5
Niederberger, P.6
Gaillardin, C.7
-
31
-
-
33747078696
-
Combinatorial engineering of intergenic regions in operons tunes expression of multiple genes
-
10.1038/nbt1226 1:CAS:528:DC%2BD28XnvVygt7s%3D
-
Pfleger BF, Pitera DJD, Smolke C, Keasling JD (2006) Combinatorial engineering of intergenic regions in operons tunes expression of multiple genes. Nat Biotechnol 24:1027-1032
-
(2006)
Nat Biotechnol
, vol.24
, pp. 1027-1032
-
-
Pfleger, B.F.1
Pitera, D.J.D.2
Smolke, C.3
Keasling, J.D.4
-
33
-
-
33645546618
-
A synthetic promoter library for constitutive gene expression in Lactobacillus plantarum
-
10.1099/mic.0.28599-0 1:CAS:528:DC%2BD28XjslyktbY%3D
-
Rud I, Jensen PR, Naterstad K, Axelsson L (2006) A synthetic promoter library for constitutive gene expression in Lactobacillus plantarum. Microbiology 152:1011-1019
-
(2006)
Microbiology
, vol.152
, pp. 1011-1019
-
-
Rud, I.1
Jensen, P.R.2
Naterstad, K.3
Axelsson, L.4
-
35
-
-
0022383957
-
Heterogeneity in the ribosomal RNA genes of the yeast Yarrowia lipolytica - Cloning and analysis of two size classes of repeats
-
10.1016/0378-1119(85)90315-4 1:CAS:528:DyaL28Xot12ksQ%3D%3D
-
Vanheerikhuizen H, Ykema A, Klootwijk J, Gaillardin C, Ballas C, Fournier P (1985) Heterogeneity in the ribosomal RNA genes of the yeast Yarrowia lipolytica - cloning and analysis of two size classes of repeats. Gene 39:213-222
-
(1985)
Gene
, vol.39
, pp. 213-222
-
-
Vanheerikhuizen, H.1
Ykema, A.2
Klootwijk, J.3
Gaillardin, C.4
Ballas, C.5
Fournier, P.6
-
36
-
-
0030896443
-
An origin of replication and a centromere are both needed to establish a replicative plasmid in the yeast Yarrowia lipolytica
-
1:CAS:528:DyaK2sXhvFOiu74%3D
-
Vernis L, Abbas A, Chasles M, Gaillardin CM, Brun C, Huberman JA, Fournier P (1997) An origin of replication and a centromere are both needed to establish a replicative plasmid in the yeast Yarrowia lipolytica. Mol Cell Biol 17:1995-2004
-
(1997)
Mol Cell Biol
, vol.17
, pp. 1995-2004
-
-
Vernis, L.1
Abbas, A.2
Chasles, M.3
Gaillardin, C.M.4
Brun, C.5
Huberman, J.A.6
Fournier, P.7
-
37
-
-
0035847053
-
Only centromeres can supply the partition system required for ARS function in the yeast Yarrowia lipolytica
-
10.1006/jmbi.2000.4300 1:CAS:528:DC%2BD3cXovFyjtro%3D
-
Vernis L, Poljak L, Chasles M, Uchida K, Casaregola S, Kas E, Matsuoka M, Gaillardin C, Fournier P (2001) Only centromeres can supply the partition system required for ARS function in the yeast Yarrowia lipolytica. J Mol Biol 305:203-217
-
(2001)
J Mol Biol
, vol.305
, pp. 203-217
-
-
Vernis, L.1
Poljak, L.2
Chasles, M.3
Uchida, K.4
Casaregola, S.5
Kas, E.6
Matsuoka, M.7
Gaillardin, C.8
Fournier, P.9
-
38
-
-
47149109665
-
Dissection of centromeric DNA from yeast Yarrowia lipolytica and identification of protein-binding site required for plasmid transmission
-
10.1263/jbb.105.571 1:CAS:528:DC%2BD1cXhtVKntrjF
-
Yamane T, Sakai H, Nagahama K, Ogawa T, Matsuoka M (2008) Dissection of centromeric DNA from yeast Yarrowia lipolytica and identification of protein-binding site required for plasmid transmission. J Biosci Bioeng 105:571-578
-
(2008)
J Biosci Bioeng
, vol.105
, pp. 571-578
-
-
Yamane, T.1
Sakai, H.2
Nagahama, K.3
Ogawa, T.4
Matsuoka, M.5
-
39
-
-
77951925139
-
Synthetic biology: Tools to design, build, and optimize cellular processes
-
10.1155/2010/130781
-
Young E, Alper H (2010) Synthetic biology: tools to design, build, and optimize cellular processes. J Biomed Biotechnol 2010:130781
-
(2010)
J Biomed Biotechnol
, vol.2010
, pp. 130781
-
-
Young, E.1
Alper, H.2
-
40
-
-
0032861774
-
SCPD: A promoter database of the yeast Saccharomyces cerevisiae
-
10.1093/bioinformatics/15.7.607 1:CAS:528:DyaK1MXntVWitbs%3D
-
Zhu J, Zhang MQ (1999) SCPD: a promoter database of the yeast Saccharomyces cerevisiae. Bioinformatics 15:607-611
-
(1999)
Bioinformatics
, vol.15
, pp. 607-611
-
-
Zhu, J.1
Zhang, M.Q.2
|