SCOPUS 정보 검색 플랫폼

Bioorganic and Medicinal Chemistry

Volumn 21, Issue 10, 2013, Pages 2720-2726

Probing the stabilizing effects of modified nucleotides in the bacterial decoding region of 16S ribosomal RNA

(2) Mahto, Santosh K a Chow, Christine S a

a WAYNE STATE UNIVERSITY (United States)

Author keywords

3 Methyluridine; 5 Methylcytidine; Decoding region; N4,2 O Dimethylcytidine; Ribosomal RNA modification

Indexed keywords

2' 2 METHYLCYTIDINE; 3 METHYL URIDINE; 5 METHYLCYTIDINE; 5' 2 BENZHYDRYLOXY BIS(TRIMETHYLSILYLOXY)SILYL 3' ORTHO (N,N DIISOPROPYLAMINO)METHOXYPHOSPHONYL N4,2' ORTHO DIMETHYLCYTIDINE; 5' 2 BENZHYDRYLOXY BIS(TRIMETHYLSILYLOXY)SILYL N4,2' ORTHO DIMETHYLCYTIDINE; CYTIDINE; PHOSPHORAMIDOUS ACID; RNA 16S; UNCLASSIFIED DRUG; URIDINE;

ARTICLE; BIOPHYSICS; CHEMISTRY; CIRCULAR DICHROISM; CLOSTRIDIUM ACETOBUTYLICUM; CONTROLLED STUDY; ESCHERICHIA COLI; METHYLATION; NONHUMAN; RIBOSOME; RNA PURIFICATION; RNA SEQUENCE; RNA STABILITY; RNA STRUCTURE; RNA SYNTHESIS; SOLID PHASE SYNTHESIS; THERMUS THERMOPHILUS;

CIRCULAR DICHROISM; CYTIDINE; NUCLEOTIDES; ORGANOPHOSPHORUS COMPOUNDS; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; URIDINE;

BACTERIA (MICROORGANISMS);

EID: 84876679138 PISSN: 09680896 EISSN: 14643391 Source Type: Journal
DOI: 10.1016/j.bmc.2013.03.010 Document Type: Article

Times cited : (4)

References (47)

1
- 0038403669
- J.M. Ogle, A.P. Carter, and V. Ramakrishnan Trends Biochem. Sci. 28 2003 259
- (2003) Trends Biochem. Sci. , vol.28 , pp. 259
- Ogle, J.M.¹ Carter, A.P.² Ramakrishnan, V.³

2
- 0035805213
- M.M. Yusupov, G.Z. Yusupova, A. Baucom, K. Lieberman, T.N. Earnest, J.H. Cate, and H.F. Noller Science 292 2001 883
- (2001) Science , vol.292 , pp. 883
- Yusupov, M.M.¹ Yusupova, G.Z.² Baucom, A.³ Lieberman, K.⁴ Earnest, T.N.⁵ Cate, J.H.⁶ Noller, H.F.⁷

3
- 0019871822
- J. Ofengand, and R. Liou Biochemistry 20 1981 552
- (1981) Biochemistry , vol.20 , pp. 552
- Ofengand, J.¹ Liou, R.²

4
- 33748582906
- A. Korostelev, S. Trakhanov, M. Laurberg, and H.F. Noller Cell 126 2006 1065
- (2006) Cell , vol.126 , pp. 1065
- Korostelev, A.¹ Trakhanov, S.² Laurberg, M.³ Noller, H.F.⁴

5
- 33749354360
- M. Selmer, C.M. Dunham, F.V. Murphy IV, A. Weixlbaumer, S. Petry, A.C. Kelley, J.R. Weir, and V. Ramakrishnan Science 313 2006 1935
- (2006) Science , vol.313 , pp. 1935
- Selmer, M.¹ Dunham, C.M.² Murphy, I.V.F.V.³ Weixlbaumer, A.⁴ Petry, S.⁵ Kelley, A.C.⁶ Weir, J.R.⁷ Ramakrishnan, V.⁸

6
- 0034624039
- M.S. VanLoock, R.K. Agrawal, I.S. Gabashvili, L. Qi, J. Frank, and S.C. Harvey J. Mol. Biol. 304 2000 507
- (2000) J. Mol. Biol. , vol.304 , pp. 507
- Vanloock, M.S.¹ Agrawal, R.K.² Gabashvili, I.S.³ Qi, L.⁴ Frank, J.⁵ Harvey, S.C.⁶

7
- 0023238983
- D. Moazed, and H.F. Noller Nature 327 1987 389
- (1987) Nature , vol.327 , pp. 389
- Moazed, D.¹ Noller, H.F.²

8
- 0032918555
- J. Rozenski, P.F. Crain, and J.A. McCloskey Nucleic Acids Res. 27 1999 196
- (1999) Nucleic Acids Res. , vol.27 , pp. 196
- Rozenski, J.¹ Crain, P.F.² McCloskey, J.A.³

9
- 28144444798
- H. Grosjean, 1st ed. Springer New York
- H. Grosjean H. Grosjean, Fine-Tuning of RNA Functions by Modification and Editing 1st ed. 2005 Springer New York 1
- (2005) Fine-Tuning of RNA Functions by Modification and Editing , pp. 1
- Grosjean, H.¹

10
- 35648960799
- C.S. Chow, T.N. Lamichhane, and S.K. Mahto ACS Chem. Biol. 2 2007 610
- (2007) ACS Chem. Biol. , vol.2 , pp. 610
- Chow, C.S.¹ Lamichhane, T.N.² Mahto, S.K.³

11
- 0028322189
- P.A. Limbach, P.F. Crain, and J.A. McCloskey Nucleic Acids Res. 22 1994 2183
- (1994) Nucleic Acids Res. , vol.22 , pp. 2183
- Limbach, P.A.¹ Crain, P.F.² McCloskey, J.A.³

12
- 0014424445
- P. Fellner, and F. Sanger Nature 219 1968 236
- (1968) Nature , vol.219 , pp. 236
- Fellner, P.¹ Sanger, F.²

13
- 13444266430
- J.A. McCloskey, and J. Rozenski Nucleic Acids Res. 33 2005 D135
- (2005) Nucleic Acids Res. , vol.33 , pp. 135
- McCloskey, J.A.¹ Rozenski, J.²

14
- 33645943707
- R. Guymon, S.C. Pomerantz, P.F. Crain, and J.A. McCloskey Biochemistry 45 2006 4888
- (2006) Biochemistry , vol.45 , pp. 4888
- Guymon, R.¹ Pomerantz, S.C.² Crain, P.F.³ McCloskey, J.A.⁴

15
- 34250796195
- G. Emmerechts, S. Barbé, P. Herdewijn, J. Anné, and J. Rozenski Nucleic Acids Res. 35 2007 3494
- (2007) Nucleic Acids Res. , vol.35 , pp. 3494
- Emmerechts, G.¹ Barbé, S.² Herdewijn, P.³ Anné, J.⁴ Rozenski, J.⁵

16
- 33847310868
- R. Guymon, S.C. Pomerantz, J.N. Ison, P.F. Crain, and J.A. McCloskey RNA 13 2007 396
- (2007) RNA , vol.13 , pp. 396
- Guymon, R.¹ Pomerantz, S.C.² Ison, J.N.³ Crain, P.F.⁴ McCloskey, J.A.⁵

17
- 0014024876
- J.L. Nichols, and B.G. Lane Biochim. Biophys. Acta 119 1966 649
- (1966) Biochim. Biophys. Acta , vol.119 , pp. 649
- Nichols, J.L.¹ Lane, B.G.²

18
- 0014434355
- J.L. Nichols, and B.G. Lane Biochim. Biophys. Acta 166 1968 605
- (1968) Biochim. Biophys. Acta , vol.166 , pp. 605
- Nichols, J.L.¹ Lane, B.G.²

19
- 49749184786
- H. Amos, and M. Korn Biochim. Biophys. Acta 29 1958 444
- (1958) Biochim. Biophys. Acta , vol.29 , pp. 444
- Amos, H.¹ Korn, M.²

20
- 27644532111
- R.H. Hall Biochem. Biophys. Res. Commun. 12 1963 361
- (1963) Biochem. Biophys. Res. Commun. , vol.12 , pp. 361
- Hall, R.H.¹

21
- 33646806139
- N.M. Andersen, and S. Douthwaite J. Mol. Biol. 359 2006 777
- (2006) J. Mol. Biol. , vol.359 , pp. 777
- Andersen, N.M.¹ Douthwaite, S.²

22
- 33344476204
- G.N. Basturea, K.E. Rudd, and M.P. Deutscher RNA 12 2006 426
- (2006) RNA , vol.12 , pp. 426
- Basturea, G.N.¹ Rudd, K.E.² Deutscher, M.P.³

23
- 77950361036
- S. Kimura, and T. Suzuki Nucleic Acids Res. 38 2010 1341
- (2010) Nucleic Acids Res. , vol.38 , pp. 1341
- Kimura, S.¹ Suzuki, T.²

24
- 0035804932
- A. Vila-Sanjurjo, and A.E. Dahlberg J. Mol. Biol. 308 2001 457
- (2001) J. Mol. Biol. , vol.308 , pp. 457
- Vila-Sanjurjo, A.¹ Dahlberg, A.E.²

25
- 40949093636
- G. Das, D.K. Thotala, S. Kapoor, S. Karunanithi, S. Thakur, N.S. Singh, and U. Varshney EMBO J. 27 2008 840
- (2008) EMBO J. , vol.27 , pp. 840
- Das, G.¹ Thotala, D.K.² Kapoor, S.³ Karunanithi, S.⁴ Thakur, S.⁵ Singh, N.S.⁶ Varshney, U.⁷

26
- 52949132997
- S.K. Mahto, and C.S. Chow Bioorg. Med. Chem. 16 2008 8795
- (2008) Bioorg. Med. Chem. , vol.16 , pp. 8795
- Mahto, S.K.¹ Chow, C.S.²

27
- 0028138280
- P. Purohit, and S. Stern Nature 370 1994 659
- (1994) Nature , vol.370 , pp. 659
- Purohit, P.¹ Stern, S.²

28
- 0029402272
- S. Stern, and P. Purohit Biochem. Cell Biol. 73 1995 899
- (1995) Biochem. Cell Biol. , vol.73 , pp. 899
- Stern, S.¹ Purohit, P.²

29
- 35548944012
- S.N. Hobbie, S.K. Kalapala, S. Akshay, C. Bruell, S. Schmidt, S. Dabow, A. Vasella, P. Sander, and E.C. Böttger Nucleic Acids Res. 35 2007 6086
- (2007) Nucleic Acids Res. , vol.35 , pp. 6086
- Hobbie, S.N.¹ Kalapala, S.K.² Akshay, S.³ Bruell, C.⁴ Schmidt, S.⁵ Dabow, S.⁶ Vasella, A.⁷ Sander, P.⁸ Böttger, E.C.⁹

30
- 38049092550
- H. Fan-Minogue, and D.M. Bedwell RNA 14 2008 148
- (2008) RNA , vol.14 , pp. 148
- Fan-Minogue, H.¹ Bedwell, D.M.²

31
- 38949116580
- C.S. Chow, S.K. Mahto, and T.N. Lamichhane ACS Chem. Biol. 3 2008 30
- (2008) ACS Chem. Biol. , vol.3 , pp. 30
- Chow, C.S.¹ Mahto, S.K.² Lamichhane, T.N.³

32
- 0032545045
- S.A. Scaringe, F.E. Wincott, and M.H. Caruthers J. Am. Chem. Soc. 120 1998 11820
- (1998) J. Am. Chem. Soc. , vol.120 , pp. 11820
- Scaringe, S.A.¹ Wincott, F.E.² Caruthers, M.H.³

33
- 0034048553
- S.A. Scaringe Methods Enzymol. 317 2000 3
- (2000) Methods Enzymol. , vol.317 , pp. 3
- Scaringe, S.A.¹

34
- 0034840624
- S.A. Scaringe Methods 23 2001 206
- (2001) Methods , vol.23 , pp. 206
- Scaringe, S.A.¹

35
- 7944234229
- S.A. Hartsel, D.E. Kitchen, S.A. Scaringe, and W.S. Marshall Methods Mol. Biol. 288 2005 33
- (2005) Methods Mol. Biol. , vol.288 , pp. 33
- Hartsel, S.A.¹ Kitchen, D.E.² Scaringe, S.A.³ Marshall, W.S.⁴

36
- 0029805937
- J.A. McDowell, and D.H. Turner Biochemistry 35 1996 14077
- (1996) Biochemistry , vol.35 , pp. 14077
- McDowell, J.A.¹ Turner, D.H.²

37
- 0031462334
- J. SantaLucia Jr., and D.H. Turner Biopolymers 44 1997 309
- (1997) Biopolymers , vol.44 , pp. 309
- Santalucia, Jr.J.¹ Turner, D.H.²

38
- 0034657608
- M. Meroueh, P.G. Grohar, J. Qiu, J. SantaLucia Jr., S.A. Scaringe, and C.S. Chow Nucleic Acids Res. 28 2000 2075
- (2000) Nucleic Acids Res. , vol.28 , pp. 2075
- Meroueh, M.¹ Grohar, P.G.² Qiu, J.³ Santalucia, Jr.J.⁴ Scaringe, S.A.⁵ Chow, C.S.⁶

39
- 84985665816
- D.M. Gray, J.J. Liu, R.L. Ratliff, and F.S. Allen Biopolymers 20 1981 1337
- (1981) Biopolymers , vol.20 , pp. 1337
- Gray, D.M.¹ Liu, J.J.² Ratliff, R.L.³ Allen, F.S.⁴

40
- 27644491082
- B.S. Schuwirth, M.A. Borovinskaya, C.W. Hau, W. Zhang, A. Vila-Sanjurjo, J.M. Holton, and J.H.D. Cate Science 310 2005 827
- (2005) Science , vol.310 , pp. 827
- Schuwirth, B.S.¹ Borovinskaya, M.A.² Hau, C.W.³ Zhang, W.⁴ Vila-Sanjurjo, A.⁵ Holton, J.M.⁶ Cate, J.H.D.⁷

41
- 0037184536
- J.M. Ogle, F.V. Murphy, M.J. Tarry, and V. Ramakrishnan Cell 111 2002 721
- (2002) Cell , vol.111 , pp. 721
- Ogle, J.M.¹ Murphy, F.V.² Tarry, M.J.³ Ramakrishnan, V.⁴

42
- 0001022647
- B.H. Dahl, K. Bjergårde, L. Henriksen, and O. Dahl Acta Chem. Scand. 44 1990 639
- (1990) Acta Chem. Scand. , vol.44 , pp. 639
- Dahl, B.H.¹ Bjergårde, K.² Henriksen, L.³ Dahl, O.⁴

43
- 0028233019
- M.P. Reddy, N.B. Hanna, and F. Farooqui Tetrahedron Lett. 35 1994 4311
- (1994) Tetrahedron Lett. , vol.35 , pp. 4311
- Reddy, M.P.¹ Hanna, N.B.² Farooqui, F.³

44
- 0029151591
- F. Wincott, A. DiRenzo, C. Shaffer, S. Grimm, D. Tracz, C. Workman, D. Sweedler, C. Gonzalez, S. Scaringe, and N. Usman Nucleic Acids Res. 23 1995 2677
- (1995) Nucleic Acids Res. , vol.23 , pp. 2677
- Wincott, F.¹ Direnzo, A.² Shaffer, C.³ Grimm, S.⁴ Tracz, D.⁵ Workman, C.⁶ Sweedler, D.⁷ Gonzalez, C.⁸ Scaringe, S.⁹ Usman, N.¹⁰

45
- 0012856471
- M.G. Gore, 2nd ed. Oxford University Press Oxford, UK
- J. Santalucia Jr. M.G. Gore, Spectrophotometry and Spectrofluorimetry 2nd ed. 2000 Oxford University Press Oxford, UK 329
- (2000) Spectrophotometry and Spectrofluorimetry , pp. 329
- Santalucia, Jr.J.¹

46
- 0003920544
- 3rd ed. CRS Press Cleaveland, OH, USA
- E.G. Richards 3rd ed. Handbook of Biochemistry and Molecular Biology Vol. 1 1975 CRS Press Cleaveland, OH, USA
- (1975) Handbook of Biochemistry and Molecular Biology , vol.1
- Richards, E.G.¹

47
- 0028959773
- R.W. Woody Methods Enzymol. 246 1995 34
- (1995) Methods Enzymol. , vol.246 , pp. 34
- Woody, R.W.¹

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.