DEBkiss or the quest for the simplest generic model of animal life history

Journal of Theoretical Biology

Volumn 328, Issue , 2013, Pages 9-18

  Jager, Tjalling ^a   Martin, Benjamin T ^b   Zimmer, Elke I ^a  

^a VU UNIVERSITY AMSTERDAM   (Netherlands)

^b HELMHOLTZ CENTRE FOR ENVIRONMENTAL RESEARCH UFZ   (Germany)

Author keywords

Dynamic energy budget; Life cycle; Life history traits; Lymnaea stagnalis

Indexed keywords

BIOLOGICAL DEVELOPMENT; FEEDING BEHAVIOR; FRESHWATER ENVIRONMENT; GROWTH RESPONSE; INVERTEBRATE; LIFE CYCLE; LIFE HISTORY TRAIT; METABOLISM; MODEL TEST; PARAMETERIZATION; POPULATION MODELING; REPRODUCTIVE BEHAVIOR; SNAIL; TOXICITY;

ARTICLE; DYNAMIC ENERGY BUDGET THEORY; EGG LAYING; EMBRYO; EMBRYO DEVELOPMENT; FEEDING BEHAVIOR; LIFE HISTORY TRAIT; LYMNAEA STAGNALIS; MATHEMATICAL COMPUTING; MATHEMATICAL MODEL; MOLLUSC LARVA; NONHUMAN; OXYGEN CONSUMPTION; POPULATION MODEL; POPULATION REGULATION; PREDICTION; PRIORITY JOURNAL; REPRODUCTIVE FITNESS; STARVATION; THEORETICAL MODEL; THEORY; WEIGHT REDUCTION;

AGING; ANIMALS; EMBRYONIC DEVELOPMENT; LIFE CYCLE STAGES; MODELS, BIOLOGICAL; REPRODUCTION;

ANIMALIA; INVERTEBRATA; LYMNAEA STAGNALIS; LYMNAEIDAE;

EID: 84876405026     PISSN: 00225193     EISSN: 10958541     Source Type: Journal    
DOI: 10.1016/j.jtbi.2013.03.011     Document Type: Article

References (31)

1. Augustine S., Gagnaire B., Floriani M., Adam-Guillermin C., Kooijman S.A.L.M. Developmental energetics of zebrafish, Danio rerio. Comp. Biochem. Physiol. A 2011, 159(3):275-283.
2. Bernardo J. The particular maternal effect of propagule size, especially egg size. patterns, models, quality of evidence and interpretations. Am. Zool. 1996, 36(2):216-236.
3. Hoffer J.N.A., Ellers J., Koene J.M. Costs of receipt and donation of ejaculates in a simultaneous hermaphrodite. BMC Evol. Biol. 2010, 10:8.
4. Horstmann H.J. Sauerstoffverbrauch und Trockengewicht der Embryonen von Lymnaea stagnalis L. Z. Vgl. Physiol. 1958, 41(4):390-404.
5. Jager T., Albert C., Preuss T.G., Ashauer R. General unified threshold model of survival-a toxicokinetic-toxicodynamic framework for ecotoxicology. Environ. Sci. Technol. 2011, 45:2529-2540.
6. Jager T., Alda Álvarez O., Kammenga J.E., Kooijman S.A.L.M. Modelling nematode life cycles using dynamic energy budgets. Funct. Ecol. 2005, 19:136-144.
7. Jager T., Heugens E.H.W., Kooijman S.A.L.M. Making sense of ecotoxicological test results. towards application of process-based models. Ecotoxicology 2006, 15:305-314.
8. Jager T., Klok C. Extrapolating toxic effects on individuals to the population level: the role of dynamic energy budgets. Philos. Trans. R. Soc. London, Ser. B 2010, 365:3531-3540.
9. Jager T., Vandenbrouck T., Baas J., De Coen W.M., Kooijman S.A.L.M. A biology-based approach for mixture toxicity of multiple endpoints over the life cycle. Ecotoxicology 2010, 19:351-361.
10. Jager T., Zimmer E.I. Simplified dynamic energy budget model for analysing ecotoxicity data. Ecol. Model. 2012, 225:74-81.
11. Klok C., De Roos A.M. Population level consequences of toxicological influences on individual growth and reproduction in Lumbricus rubellus (Lumbricidae, Oligochaeta). Ecotoxicol. Environ. Saf. 1996, 33:118-127.
12. Kooijman S.A.L.M. Quantitative aspects of metabolic organization. a discussion of concepts. Philos. Trans. R. Soc. London, Ser B 2001, 356:331-349.
13. Kooijman S.A.L.M. What the egg can tell about its hen. embryonic development on the basis of dynamic energy budgets. J. Math. Biol. 2009, 58(3):377-394.
14. Kooijman S.A.L.M., Metz J.A.J. On the dynamics of chemically stressed populations. the deduction of population consequences from effects on individuals. Ecotoxicol. Environ. Saf. 1984, 8:254-274.
15. Kooijman S.A.L.M., Pecquerie L., Augustine S., Jusup M. Scenarios for acceleration in fish development and the role of metamorphosis. J. Sea Res. 2011, 66:419-423.
16. Kooijman S.A.L.M., Sousa T., Pecquerie L., Van der Meer J., Jager T. From food-dependent statistics to metabolic parameters, a practical guide to the use of dynamic energy budget theory. Biol. Rev. 2008, 83:533-552.
17. Lika K., Kearney M.R., Freitas V., Van der Veer H.W., Van der Meer J., Wijsman J.W.M., Pecquerie L., Kooijman S.A.L.M. The "covariation method" for estimating the parameters of the standard dynamic energy budget model I. philosophy and approach. J. Sea Res. 2011, 66:270-277.
18. Lika K., Kooijman S.A.L.M. The comparative topology of energy allocation in budget models. J. Sea Res. 2011, 66:381-391.
19. Lika K., Nisbet R.M. A dynamic energy budget model based on partitioning of net production. J. Math. Biol. 2000, 41(4):361-386.
20. Marois R., Croll R.P. Hatching asynchrony within the egg mass of the pond snail, Lymnaea stagnalis. Invertebr. Reprod. Dev. 1991, 19(2):139-146.
21. Martin, B.T., Jager, T., Nisbet, R.M., Preuss, T.G., Grimm, V., 2013 Predicting population dynamics from the properties of individuals: a cross-level test of dynamic energy budget theory. Am. Nat., 181, 506-519.
22. Martin B.T., Zimmer E.I., Grimm V., Jager T. Dynamic energy budget theory meets individual-based modelling. a generic and accessible implementation. Methods Ecol. Evol. 2012, 3(2):445-449.
23. Mueller C.A., Augustine S., Kooijman S.A.L.M., Kearney M.R., Seymour R.S. The trade-off between maturation and growth during accelerated development in frogs. Comp. Biochem. Physiol. A: Mol. Integr. Physiol. 2012, 163(1):95-102.
24. Nisbet R.M., McCauley E., Johnson L.R. Dynamic energy budget theory and population ecology. lessons from Daphnia. Philos. Trans. R. Soc. London, Ser. B 2010, 365(1557):3541-3552.
25. Nisbet R.M., Muller E.B., Lika K., Kooijman S.A.L.M. From molecules to ecosystems through dynamic energy budget models. J. Anim. Ecol. 2000, 69:913-926.
26. Sinervo B., McEdward L.R. Developmental consequences of an evolutionary change in egg size. an experimental test. Evolution 1988, 42(5):885-899.
27. Sousa T., Domingos T., Poggiale J.C., Kooijman S.A.L.M. Dynamic energy budget theory restores coherence in biology. Philos. Trans. R. Soc. London, Ser. B 2010, 365(1557):3413-3428.
28. Van Leeuwen I.M.M., Vera J., Wolkenhauer O. Dynamic energy budget approaches for modelling organismal ageing. Philos. Trans. R. Soc. London, Ser. B 2010, 365(1557):3443-3454.
29. Zimmer E.I., Jager T., Ducrot V., Lagadic L., Kooijman S.A.L.M. Juvenile food limitation in standardized tests. a warning to ecotoxicologists. Ecotoxicology 2012, 21(8):2195-2204.
30. Zonneveld C., Kooijman S.A.L.M. Application of a dynamic energy budget model to Lymnaea stagnalis (L.). Funct. Ecol. 1989, 3(3):269-278.
31. Zonneveld C., Kooijman S.A.L.M. Comparative kinetics of embryo development. Bull. Math. Biol. 1993, 55(3):609-635.