-
1
-
-
79955545225
-
Stochastic growth reduces population fluctuations in Daphnia-algal systems
-
Ananthasubramaniam, B., R. M. Nisbet, W. A. Nelson, E. McCauley, and W. S. C. Gurney. 2011. Stochastic growth reduces population fluctuations in Daphnia-algal systems. Ecology 92:362-372.
-
(2011)
Ecology
, vol.92
, pp. 362-372
-
-
Ananthasubramaniam, B.1
Nisbet, R.M.2
Nelson, W.A.3
McCauley, E.4
Gurney, W.S.C.5
-
2
-
-
34248136767
-
Towards a standard for the individual-based modeling of plant populations: Selfthinning and the field-of-neighborhood approach
-
Berger, U., H. Hildenbrandt, and V. Grimm. 2002. Towards a standard for the individual-based modeling of plant populations: selfthinning and the field-of-neighborhood approach. Natural Resource Modeling 15:39-54.
-
(2002)
Natural Resource Modeling
, vol.15
, pp. 39-54
-
-
Berger, U.1
Hildenbrandt, H.2
Grimm, V.3
-
3
-
-
84886946507
-
Starvation tolerance, development time and egg production of Calanoides carinatus in the southern Benguela Current
-
Borchers, P., and L. Hutchings. 1986. Starvation tolerance, development time and egg production of Calanoides carinatus in the southern Benguela Current. Journal of Plankton Research 10:907-920.
-
(1986)
Journal of Plankton Research
, vol.10
, pp. 907-920
-
-
Borchers, P.1
Hutchings, L.2
-
4
-
-
0026046777
-
Energy allocation in the cladoceran Daphnia magna Straus, under starvation and refeeding
-
Bradley, M. C., N. Perrin, and P. Calow. 1991. Energy allocation in the cladoceran Daphnia magna Straus, under starvation and refeeding. Oecologia (Berlin) 86:414-418.
-
(1991)
Oecologia (Berlin)
, vol.86
, pp. 414-418
-
-
Bradley, M.C.1
Perrin, N.2
Calow, P.3
-
5
-
-
0030618250
-
Life-strategy shift by intraspecific interaction in Daphnia magna: Change in reproduction from quantity to quality
-
Cleuvers, M., B. Goser, and H. T. Ratte. 1997. Life-strategy shift by intraspecific interaction in Daphnia magna: change in reproduction from quantity to quality. Oecologia (Berlin) 110:337-345.
-
(1997)
Oecologia (Berlin)
, vol.110
, pp. 337-345
-
-
Cleuvers, M.1
Goser, B.2
Ratte, H.T.3
-
7
-
-
37149047343
-
Demographic analysis of continuous-time lifehistory models
-
de Roos, A. M. 2008. Demographic analysis of continuous-time lifehistory models. Ecology Letters 11:1-15.
-
(2008)
Ecology Letters
, vol.11
, pp. 1-15
-
-
de Roos, A.M.1
-
10
-
-
0028165597
-
Experimental evidence of negative interference in Daphnia magna
-
Goser, B., and H. T. Ratte. 1994. Experimental evidence of negative interference in Daphnia magna. Oecologia (Berlin) 98:354-361.
-
(1994)
Oecologia (Berlin)
, vol.98
, pp. 354-361
-
-
Goser, B.1
Ratte, H.T.2
-
11
-
-
0033557660
-
Ten years of individual-based modelling in ecology: What have we learned, and what could we learn in the future?
-
Grimm, V. 1999. Ten years of individual-based modelling in ecology: what have we learned, and what could we learn in the future? Ecological Modelling 115:129-148.
-
(1999)
Ecological Modelling
, vol.115
, pp. 129-148
-
-
Grimm, V.1
-
12
-
-
33748151495
-
A standard protocol for describing individual-based and agent-based models
-
Grimm, V., U. Berger, F. Bastiansen, S. Eliassen, V. Ginot, J. Giske, J. Goss-Custard, et al. 2006. A standard protocol for describing individual-based and agent-based models. Ecological Modelling 198:115-126.
-
(2006)
Ecological Modelling
, vol.198
, pp. 115-126
-
-
Grimm, V.1
Berger, U.2
Bastiansen, F.3
Eliassen, S.4
Ginot, V.5
Giske, J.6
Goss-Custard, J.7
-
13
-
-
77957301158
-
The ODD protocol: A review and first update
-
Grimm, V., U. Berger, D. L. DeAngelis, J. G. Polhill, J. Giske, and S. F. Railsback. 2010. The ODD protocol: a review and first update. Ecological Modelling 221:2760-2768.
-
(2010)
Ecological Modelling
, vol.221
, pp. 2760-2768
-
-
Grimm, V.1
Berger, U.2
DeAngelis, D.L.3
Polhill, J.G.4
Giske, J.5
Railsback, S.F.6
-
15
-
-
0033558313
-
Individual-based modelling and ecological theory: Synthesis of a workshop
-
Grimm, V., T. Wyszomirski, D. Aikman, and J. Uchmanki. 1999. Individual-based modelling and ecological theory: synthesis of a workshop. Ecological Modelling 115:275-282.
-
(1999)
Ecological Modelling
, vol.115
, pp. 275-282
-
-
Grimm, V.1
Wyszomirski, T.2
Aikman, D.3
Uchmanki, J.4
-
16
-
-
0035929432
-
The dynamics of the macromolecular composition of biomass
-
Hanegraaf, P. P. F., and E. B. Muller. 2001. The dynamics of the macromolecular composition of biomass. Journal of Theoretical Biology 212:237-251.
-
(2001)
Journal of Theoretical Biology
, vol.212
, pp. 237-251
-
-
Hanegraaf, P.P.F.1
Muller, E.B.2
-
17
-
-
55349137753
-
Energy uptake and allocation during ontogeny
-
Hou, C., W. Zuo, M. E. Moses, W. H. Woodruff, J. H. Brown, and G. B. West. 2008. Energy uptake and allocation during ontogeny. Science 322:736-739.
-
(2008)
Science
, vol.322
, pp. 736-739
-
-
Hou, C.1
Zuo, W.2
Moses, M.E.3
Woodruff, W.H.4
Brown, J.H.5
West, G.B.6
-
18
-
-
0001164138
-
New computer models unify ecological theory
-
Huston, M., D. DeAngelis, andW. Post. 1988. New computer models unify ecological theory. BioScience 38:682-691.
-
(1988)
BioScience
, vol.38
, pp. 682-691
-
-
Huston, M.1
DeAngelis, D.2
Post, W.3
-
19
-
-
78149267783
-
Extrapolating toxic effects on individuals to the population level: The role of dynamic energy budgets
-
Jager, T., and C. Klok. 2010. Extrapolating toxic effects on individuals to the population level: the role of dynamic energy budgets. Philosophical Transactions of the Royal Society B: Biological Sciences 365:3531-3540.
-
(2010)
Philosophical Transactions of the Royal Society B: Biological Sciences
, vol.365
, pp. 3531-3540
-
-
Jager, T.1
Klok, C.2
-
20
-
-
18444411981
-
Population cycles in the pine looper moth: Dynamical tests of mechanistic hypotheses
-
Kendall, B. E., S. P. Ellner, E. McCauley, S. N. Wood, C. J. Briggs, W. W. Murdoch, and P. Turchin. 2005. Population cycles in the pine looper moth: dynamical tests of mechanistic hypotheses. Ecological Monographs 75:259-276.
-
(2005)
Ecological Monographs
, vol.75
, pp. 259-276
-
-
Kendall, B.E.1
Ellner, S.P.2
McCauley, E.3
Wood, S.N.4
Briggs, C.J.5
Murdoch, W.W.6
Turchin, P.7
-
26
-
-
82655172907
-
The "covariation method" for estimating the parameters of the standard dynamic energy budget model I: Philosophy and approach
-
Lika, K., M. R. Kearney, V. Freitas, H. W. van der Veer, J. van der Meer, J. W. M. Wijsmin, L. Pecquerie, and S. A. L. M. Kooijman. 2011. The "covariation method" for estimating the parameters of the standard dynamic energy budget model I: philosophy and approach. Journal of Sea Research 66:270-277.
-
(2011)
Journal of Sea Research
, vol.66
, pp. 270-277
-
-
Lika, K.1
Kearney, M.R.2
Freitas, V.3
van der Veer, H.W.4
van der Meer, J.5
Wijsmin, J.W.M.6
Pecquerie, L.7
Kooijman, S.A.L.M.8
-
27
-
-
84867373809
-
Dynamic energy budget theory meets individual-based modelling: A generic and accessible implementation
-
doi:10.1111/j.2041-210X.2011.00168.x
-
Martin, B. T., E. I. Zimmer, V. Grimm, and T. Jager. 2012. Dynamic energy budget theory meets individual-based modelling: a generic and accessible implementation. Methods in Ecology and Evolution 3:445-449, doi:10.1111/j.2041-210X.2011.00168.x.
-
(2012)
Methods in Ecology and Evolution
, vol.3
, pp. 445-449
-
-
Martin, B.T.1
Zimmer, E.I.2
Grimm, V.3
Jager, T.4
-
28
-
-
0025207298
-
The physiological ecology of Daphnia: Development of a model of growth and reproduction
-
McCauley, E., W. W. Murdoch, R. M. Nisbet, and W. S. C. Gurney. 1990. The physiological ecology of Daphnia: development of a model of growth and reproduction. Ecology 71:703-715.
-
(1990)
Ecology
, vol.71
, pp. 703-715
-
-
McCauley, E.1
Murdoch, W.W.2
Nisbet, R.M.3
Gurney, W.S.C.4
-
29
-
-
55249113204
-
Small-amplitude cycles emerge from stage-structured interactions in Daphnia-algal systems
-
McCauley, E., W. A. Nelson, and R. M. Nisbet. 2008. Small-amplitude cycles emerge from stage-structured interactions in Daphnia-algal systems. Nature 455:1240-1243.
-
(2008)
Nature
, vol.455
, pp. 1240-1243
-
-
McCauley, E.1
Nelson, W.A.2
Nisbet, R.M.3
-
30
-
-
0033540082
-
Large-amplitude cycles of Daphnia and its algal prey in enriched environments
-
McCauley, E., R. M. Nisbet, W. W. Murdoch, A. M. de Roos, and W. S. C. Gurney. 1999. Large-amplitude cycles of Daphnia and its algal prey in enriched environments. Nature 402:653-656.
-
(1999)
Nature
, vol.402
, pp. 653-656
-
-
McCauley, E.1
Nisbet, R.M.2
Murdoch, W.W.3
de Roos, A.M.4
Gurney, W.S.C.5
-
31
-
-
78650678116
-
Synthesizing units as modeling tool for photosynthesizing organisms with photoinhibition and nutrient limitation
-
Muller, E. B. 2011. Synthesizing units as modeling tool for photosynthesizing organisms with photoinhibition and nutrient limitation. Ecological Modelling 222:637-644.
-
(2011)
Ecological Modelling
, vol.222
, pp. 637-644
-
-
Muller, E.B.1
-
32
-
-
0031819602
-
Plankton abundance and dynamics across nutrient levels: Tests of hypotheses
-
Murdoch, W. W., R. M. Nisbet, E. McCauley, A. M. de Roos, and W. S. C. Gurney. 1998. Plankton abundance and dynamics across nutrient levels: tests of hypotheses. Ecology 79:1339-1356.
-
(1998)
Ecology
, vol.79
, pp. 1339-1356
-
-
Murdoch, W.W.1
Nisbet, R.M.2
McCauley, E.3
de Roos, A.M.4
Gurney, W.S.C.5
-
33
-
-
84858641311
-
Integrating dynamic energy budget (DEB) theory with traditional bioenergetic models
-
Nisbet, R. M., M. Jusup, and T. Klanjscek. 2012. Integrating dynamic energy budget (DEB) theory with traditional bioenergetic models. Journal of Experimental Biology 215:892-902.
-
(2012)
Journal of Experimental Biology
, vol.215
, pp. 892-902
-
-
Nisbet, R.M.1
Jusup, M.2
Klanjscek, T.3
-
35
-
-
0034492256
-
From molecules to ecosystems through dynamic energy budget models
-
Nisbet, R. M., E. B. Muller, K. Lika, and S. A. L. M. Kooijman. 2000. From molecules to ecosystems through dynamic energy budget models. Journal of Animal Ecology 69:913-926.
-
(2000)
Journal of Animal Ecology
, vol.69
, pp. 913-926
-
-
Nisbet, R.M.1
Muller, E.B.2
Lika, K.3
Kooijman, S.A.L.M.4
-
36
-
-
82655181870
-
Analyzing variations in life-history traits of Pacific salmon in the context of dynamic energy budget (DEB) theory
-
Pecquerie, L., L. R. Johnson, S. A. L. M. Kooijman, and R. M. Nisbet. 2011. Analyzing variations in life-history traits of Pacific salmon in the context of dynamic energy budget (DEB) theory. Journal of Sea Research 66:424-433.
-
(2011)
Journal of Sea Research
, vol.66
, pp. 424-433
-
-
Pecquerie, L.1
Johnson, L.R.2
Kooijman, S.A.L.M.3
Nisbet, R.M.4
-
37
-
-
71749088127
-
Modeling fish growth and reproduction in the context of the dynamic energy budget theory to predict environmental impact on anchovy spawning duration
-
Pecquerie, L., P. Petitgas, and S. A. L. M. Kooijman. 2009. Modeling fish growth and reproduction in the context of the dynamic energy budget theory to predict environmental impact on anchovy spawning duration. Journal of Sea Research 62:93-105.
-
(2009)
Journal of Sea Research
, vol.62
, pp. 93-105
-
-
Pecquerie, L.1
Petitgas, P.2
Kooijman, S.A.L.M.3
-
38
-
-
0025590929
-
Plasticity of storage allocation in Daphnia magna
-
Perrin, N., M. C. Bradley, and P. Calow. 1990. Plasticity of storage allocation in Daphnia magna. Oikos 59:70-74.
-
(1990)
Oikos
, vol.59
, pp. 70-74
-
-
Perrin, N.1
Bradley, M.C.2
Calow, P.3
-
39
-
-
58149345194
-
Development and validation of an individual based Daphnia magna population model: The influence of crowding on population dynamics
-
Preuss, T. G., M. Hammers-Wirtz, U. Hommen, M. N. Rubach, and H. T. Ratte. 2009. Development and validation of an individual based Daphnia magna population model: the influence of crowding on population dynamics. Ecological Modelling 220:310-329.
-
(2009)
Ecological Modelling
, vol.220
, pp. 310-329
-
-
Preuss, T.G.1
Hammers-Wirtz, M.2
Hommen, U.3
Rubach, M.N.4
Ratte, H.T.5
-
40
-
-
19344364828
-
A model approach to evaluate the effect of temperature and food concentration on individual lifehistory and population dynamics of Daphnia
-
Rinke, K., and J. Vijverberg. 2005. A model approach to evaluate the effect of temperature and food concentration on individual lifehistory and population dynamics of Daphnia. EcologicalModelling 186:326-344.
-
(2005)
EcologicalModelling
, vol.186
, pp. 326-344
-
-
Rinke, K.1
Vijverberg, J.2
-
41
-
-
0032976332
-
Role of microsystems in poisoning and food ingestion inhibition of Daphnia galeta caused by the cyanobacterium Microcystis aeruginosa
-
Rohrlack, T., E. Dittmann, M. Henning, T. Börner, and J. G. Kohl. 1999. Role of microsystems in poisoning and food ingestion inhibition of Daphnia galeta caused by the cyanobacterium Microcystis aeruginosa. Applied and Environmental Microbiology 65: 737-739.
-
(1999)
Applied and Environmental Microbiology
, vol.65
, pp. 737-739
-
-
Rohrlack, T.1
Dittmann, E.2
Henning, M.3
Börner, T.4
Kohl, J.G.5
-
42
-
-
0025686642
-
Dynamic-models of growth and reproduction of the mussel Mytilus edulis L
-
Ross, A. H., and R. M. Nisbet. 1990. Dynamic-models of growth and reproduction of the mussel Mytilus edulis L. Functional Ecology 4:777-787.
-
(1990)
Functional Ecology
, vol.4
, pp. 777-787
-
-
Ross, A.H.1
Nisbet, R.M.2
-
43
-
-
82655181910
-
DEB parameters estimation for Mytilus edulis
-
Saraiva, S., J. van der Meer, S. A. L. M. Kooijman, and T. Sousa. 2011. DEB parameters estimation for Mytilus edulis. Journal of Sea Research 66:289-296.
-
(2011)
Journal of Sea Research
, vol.66
, pp. 289-296
-
-
Saraiva, S.1
van der Meer, J.2
Kooijman, S.A.L.M.3
Sousa, T.4
-
46
-
-
78149248758
-
Dynamic energy budget theory restores coherence in biology
-
Sousa, T., T. Domingos, J. C. Poggiale, and S. A. L. M. Kooijman. 2010. Dynamic energy budget theory restores coherence in biology. Philosophical Transactions of the Royal Society B: Biological Sciences 365:3413-3428.
-
(2010)
Philosophical Transactions of the Royal Society B: Biological Sciences
, vol.365
, pp. 3413-3428
-
-
Sousa, T.1
Domingos, T.2
Poggiale, J.C.3
Kooijman, S.A.L.M.4
-
47
-
-
84988156406
-
Starvation in Daphnia: Energy reserves and reproductive allocation
-
Tessier, A. J., L. L. Henry, and C. E. Goulden. 1983. Starvation in Daphnia: energy reserves and reproductive allocation. Limnology and Oceanography 28:667-676.
-
(1983)
Limnology and Oceanography
, vol.28
, pp. 667-676
-
-
Tessier, A.J.1
Henry, L.L.2
Goulden, C.E.3
-
48
-
-
0028160359
-
Starvation tolerance of a marine copepod Pseudocalanus newmani Frost
-
Tsuda, A. 1994. Starvation tolerance of a marine copepod Pseudocalanus newmani Frost. Journal of Experimental Marine Biology and Ecology 181:81-89.
-
(1994)
Journal of Experimental Marine Biology and Ecology
, vol.181
, pp. 81-89
-
-
Tsuda, A.1
-
50
-
-
48949115088
-
Modeling individual and population dynamics in a consumer-resource system: Behavior under food limitation and crowding and the effect on population cycling in Daphnia
-
Vanoverbeke, J. 2008. Modeling individual and population dynamics in a consumer-resource system: behavior under food limitation and crowding and the effect on population cycling in Daphnia. Ecological Modelling 216:385-401.
-
(2008)
Ecological Modelling
, vol.216
, pp. 385-401
-
-
Vanoverbeke, J.1
-
51
-
-
70449172754
-
Quantitative laws in metabolism and growth
-
von Bertalanffy, L. 1957. Quantitative laws in metabolism and growth. Quarterly Review of Biology 32:217-231.
-
(1957)
Quarterly Review of Biology
, vol.32
, pp. 217-231
-
-
von Bertalanffy, L.1
-
52
-
-
0141877349
-
-
Center for Connected Learning and Computer-Based Modeling, Northwestern University, Evanston, IL
-
Wilensky, U. 1999. NetLogo. Center for Connected Learning and Computer-Based Modeling, Northwestern University, Evanston, IL. http://ccl.northwestern.edu/netlogo/.
-
(1999)
NetLogo
-
-
Wilensky, U.1
|