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Volumn 62, Issue , 2013, Pages 82-91

Effects of slurry from sulfadiazine- (SDZ) and difloxacin- (DIF) medicated pigs on the structural diversity of microorganisms in bulk and rhizosphere soil

Author keywords

Denaturing gradient gel electrophoresis; Manure composition; Mesocosm; Microbial community structure; Phospholipid fatty acids; Veterinary antibiotics

Indexed keywords

DENATURING GRADIENT GEL ELECTROPHORESES (DGGE); MESOCOSMS; MICROBIAL COMMUNITY STRUCTURES; PHOSPHOLIPID FATTY ACIDS; VETERINARY ANTIBIOTIC;

EID: 84876331926     PISSN: 00380717     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.soilbio.2013.03.007     Document Type: Article
Times cited : (61)

References (58)
  • 2
    • 13544264433 scopus 로고    scopus 로고
    • Assessment of genotypic diversity of antibiotic-producing Pseudomonas species in the rhizosphere by denaturing gradient gel electrophoresis
    • Bergsma-Vlami M., Prins M.E., Staats M., Raaijmakers J.M. Assessment of genotypic diversity of antibiotic-producing Pseudomonas species in the rhizosphere by denaturing gradient gel electrophoresis. Applied and Environmental Microbiology 2005, 71:993-1003.
    • (2005) Applied and Environmental Microbiology , vol.71 , pp. 993-1003
    • Bergsma-Vlami, M.1    Prins, M.E.2    Staats, M.3    Raaijmakers, J.M.4
  • 3
    • 79960932937 scopus 로고    scopus 로고
    • Anti-microbial activity of the sterols and steroids extracted from the Algerian Oudneyaafricana R. Br
    • Bouhadjera K., Kebir T., Baba-Ahmed A., Bendahou M. Anti-microbial activity of the sterols and steroids extracted from the Algerian Oudneyaafricana R. Br. Pakistan Journal of Biological Sciences 2005, 8:834-838.
    • (2005) Pakistan Journal of Biological Sciences , vol.8 , pp. 834-838
    • Bouhadjera, K.1    Kebir, T.2    Baba-Ahmed, A.3    Bendahou, M.4
  • 5
    • 65249188408 scopus 로고    scopus 로고
    • Increased pollution-induced bacterial community tolerance to sulfadiazine in soil hotspots amended with artificial root exudates
    • Brandt K.K., Sjoholm O.R., Krogh K.A., Halling-Sorensen B., Nybroe O. Increased pollution-induced bacterial community tolerance to sulfadiazine in soil hotspots amended with artificial root exudates. Environmental Science and Technology 2009, 43:2963-2968.
    • (2009) Environmental Science and Technology , vol.43 , pp. 2963-2968
    • Brandt, K.K.1    Sjoholm, O.R.2    Krogh, K.A.3    Halling-Sorensen, B.4    Nybroe, O.5
  • 6
    • 77949320160 scopus 로고    scopus 로고
    • The rhizosphere zoo: An overview of plant-associated communities of microorganisms, including phages, bacteria, archaea, and fungi, and of some of their structuring factors
    • Buée M., Boer W., de Martin F., van Overbeek L., Jurkevitch E. The rhizosphere zoo: An overview of plant-associated communities of microorganisms, including phages, bacteria, archaea, and fungi, and of some of their structuring factors. Plant and Soil 2009, 321:189-212.
    • (2009) Plant and Soil , vol.321 , pp. 189-212
    • Buée, M.1    Boer, W.2    de Martin, F.3    van Overbeek, L.4    Jurkevitch, E.5
  • 7
    • 0442269699 scopus 로고    scopus 로고
    • Manures
    • CABI Publ., Wallingford, UK, P.M. Haygarth, S.C. Jarvis (Eds.)
    • Chadwick D.R., Chen S. Manures. Agriculture, Hydrology and Water Quality 2002, 57-82. CABI Publ., Wallingford, UK. P.M. Haygarth, S.C. Jarvis (Eds.).
    • (2002) Agriculture, Hydrology and Water Quality , pp. 57-82
    • Chadwick, D.R.1    Chen, S.2
  • 8
    • 77949264819 scopus 로고    scopus 로고
    • Plant growth-promoting bacteria in the rhizo- and endosphere of plants: their role, colonization, mechanisms involved and prospects for utilization
    • Compant S., Clément C., Sessitsch A. Plant growth-promoting bacteria in the rhizo- and endosphere of plants: their role, colonization, mechanisms involved and prospects for utilization. Soil Biology and Biochemistry 2010, 42:669-678.
    • (2010) Soil Biology and Biochemistry , vol.42 , pp. 669-678
    • Compant, S.1    Clément, C.2    Sessitsch, A.3
  • 11
    • 0031691985 scopus 로고    scopus 로고
    • Chemical and spectroscopic characterization of colloidal fractions separated from liquid hog manures
    • Dinel H., Schnitzer M., Schulten H.R. Chemical and spectroscopic characterization of colloidal fractions separated from liquid hog manures. Plant Nutrition and Soil Science 1998, 163:665-673.
    • (1998) Plant Nutrition and Soil Science , vol.163 , pp. 665-673
    • Dinel, H.1    Schnitzer, M.2    Schulten, H.R.3
  • 14
    • 84876303117 scopus 로고    scopus 로고
    • EMEA, 2008. Revised Guideline on Environmental Impact Assessment for Veterinary Medicinal Products in Support of the VICH Guidelines GL 6 and GL 38 European Medicines Agency Guidance Document EMEA/CVMP/ERA/418282/2005-Rev.1
    • EMEA, 2008. Revised Guideline on Environmental Impact Assessment for Veterinary Medicinal Products in Support of the VICH Guidelines GL 6 and GL 38 European Medicines Agency Guidance Document EMEA/CVMP/ERA/418282/2005-Rev.1, 2008. http://www.ema.europa.eu/docs/en_GB/document_library/Scientific_guideline/2009/10/WC500004386.pdf.
    • (2008)
  • 15
    • 0037227464 scopus 로고    scopus 로고
    • Variations in microbial community composition through two soil depth profiles
    • Fierer N., Schimel J.P., Holden P.A. Variations in microbial community composition through two soil depth profiles. Soil Biology and Biochemistry 2003, 35:167-176.
    • (2003) Soil Biology and Biochemistry , vol.35 , pp. 167-176
    • Fierer, N.1    Schimel, J.P.2    Holden, P.A.3
  • 16
    • 77955734902 scopus 로고    scopus 로고
    • The mechanistic link between sulfonamide uptake and effect on the growth of bacteria: model development and application to experimental data from two soil microorganisms
    • Focks A., Klasmeier J., Matthies M. The mechanistic link between sulfonamide uptake and effect on the growth of bacteria: model development and application to experimental data from two soil microorganisms. Environmental Toxicology and Chemistry 2010, 29:1445-1452.
    • (2010) Environmental Toxicology and Chemistry , vol.29 , pp. 1445-1452
    • Focks, A.1    Klasmeier, J.2    Matthies, M.3
  • 17
    • 43949111630 scopus 로고    scopus 로고
    • Analysis of aged sulfadiazine residues in soils using microwave extraction and liquid chromatography tandem mass spectrometry
    • Förster M., Laabs V., Lamshöft M., Pütz T., Amelung W. Analysis of aged sulfadiazine residues in soils using microwave extraction and liquid chromatography tandem mass spectrometry. Analytical and Bioanalytical Chemistry 2008, 391:1029-1038.
    • (2008) Analytical and Bioanalytical Chemistry , vol.391 , pp. 1029-1038
    • Förster, M.1    Laabs, V.2    Lamshöft, M.3    Pütz, T.4    Amelung, W.5
  • 19
    • 77952292698 scopus 로고    scopus 로고
    • Effect of sulfonamide antibiotics on microbial diversity and activity in a Californian Mollic Haploxeralf
    • Gutiérrez I., Watanabe N., Harter T., Glaser B., Radke M. Effect of sulfonamide antibiotics on microbial diversity and activity in a Californian Mollic Haploxeralf. Journal of Soils and Sediments 2010, 10:537-544.
    • (2010) Journal of Soils and Sediments , vol.10 , pp. 537-544
    • Gutiérrez, I.1    Watanabe, N.2    Harter, T.3    Glaser, B.4    Radke, M.5
  • 20
    • 46549088719 scopus 로고    scopus 로고
    • Impact of the antibiotic sulfadiazine and pig manure on the microbial community structure in agricultural soils
    • Hammesfahr U., Heuer H., Manzke B., Smalla K., Thiele-Bruhn S. Impact of the antibiotic sulfadiazine and pig manure on the microbial community structure in agricultural soils. Soil Biology and Biochemistry 2008, 40:1583-1591.
    • (2008) Soil Biology and Biochemistry , vol.40 , pp. 1583-1591
    • Hammesfahr, U.1    Heuer, H.2    Manzke, B.3    Smalla, K.4    Thiele-Bruhn, S.5
  • 21
  • 22
    • 0030618086 scopus 로고    scopus 로고
    • Emission of climate-relevant trace gases and succession of microbial communities during open-windrow composting
    • Hellmann B., Zelles L., Palojarvi A., Bai Q. Emission of climate-relevant trace gases and succession of microbial communities during open-windrow composting. Applied and Environmental Microbiology 1997, 63:1011-1018.
    • (1997) Applied and Environmental Microbiology , vol.63 , pp. 1011-1018
    • Hellmann, B.1    Zelles, L.2    Palojarvi, A.3    Bai, Q.4
  • 23
    • 0030739128 scopus 로고    scopus 로고
    • Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients
    • Heuer H., Krsek M., Baker P., Smalla K., Wellington E.M. Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients. Applied and Environmental Microbiology 1997, 63:3233-3241.
    • (1997) Applied and Environmental Microbiology , vol.63 , pp. 3233-3241
    • Heuer, H.1    Krsek, M.2    Baker, P.3    Smalla, K.4    Wellington, E.M.5
  • 24
    • 33846948962 scopus 로고    scopus 로고
    • Manure and sulfadiazine synergistically increased bacterial antibiotic resistance in soil over at least two months
    • Heuer H., Smalla K. Manure and sulfadiazine synergistically increased bacterial antibiotic resistance in soil over at least two months. Environmental Microbiology 2007, 9:657-666.
    • (2007) Environmental Microbiology , vol.9 , pp. 657-666
    • Heuer, H.1    Smalla, K.2
  • 25
    • 79959306747 scopus 로고    scopus 로고
    • Antibiotic resistance gene spread due to manure application on agricultural fields. Ecology and Industrial Microbiology. Special section: Archaea
    • Heuer H., Schmitt H., Smalla K. Antibiotic resistance gene spread due to manure application on agricultural fields. Ecology and Industrial Microbiology. Special section: Archaea. Current Opinion in Microbiology 2011, 14:236-243.
    • (2011) Current Opinion in Microbiology , vol.14 , pp. 236-243
    • Heuer, H.1    Schmitt, H.2    Smalla, K.3
  • 27
    • 68249094397 scopus 로고    scopus 로고
    • Tracing and quantifying sources of fatty acids and steroids in amended cultivated soils
    • Jardé E., Gruau G., Jaffrezic A. Tracing and quantifying sources of fatty acids and steroids in amended cultivated soils. Agricultural and Food Chemistry 2009, 57:6950-6956.
    • (2009) Agricultural and Food Chemistry , vol.57 , pp. 6950-6956
    • Jardé, E.1    Gruau, G.2    Jaffrezic, A.3
  • 28
    • 33745803183 scopus 로고    scopus 로고
    • Methods for evaluating human impact on soil microorganisms based on their activity, biomass, and diversity in agricultural soils
    • Joergensen R.G., Emmerling C. Methods for evaluating human impact on soil microorganisms based on their activity, biomass, and diversity in agricultural soils. Journal of Plant Nutrition and Soil Science 2006, 169:295-309.
    • (2006) Journal of Plant Nutrition and Soil Science , vol.169 , pp. 295-309
    • Joergensen, R.G.1    Emmerling, C.2
  • 29
    • 79954626115 scopus 로고    scopus 로고
    • Determination of microbial biomass and fungal and bacterial distribution in cattle faeces
    • Jost D.I., Indorf C., Joergensen R.G., Sundrum A. Determination of microbial biomass and fungal and bacterial distribution in cattle faeces. Soil Biology and Biochemistry 2011, 43:1237-1244.
    • (2011) Soil Biology and Biochemistry , vol.43 , pp. 1237-1244
    • Jost, D.I.1    Indorf, C.2    Joergensen, R.G.3    Sundrum, A.4
  • 30
    • 0034962066 scopus 로고    scopus 로고
    • Antimicrobial activity of Cassia alata
    • Khan M.R., Kihara M., Omoloso A.D. Antimicrobial activity of Cassia alata. Fitoterapia 2001, 72:561-564.
    • (2001) Fitoterapia , vol.72 , pp. 561-564
    • Khan, M.R.1    Kihara, M.2    Omoloso, A.D.3
  • 31
    • 78149464195 scopus 로고    scopus 로고
    • Effect of sulfadiazine on abundance and diversity of denitrifying bacteria by determining nirK and nirSgenes in two arable soils
    • Kleineidam K., Sharma S., Kotzerke A., Heuer H., Thiele-Bruhn S., Smalla K., Wilke B.-M., Schloter M. Effect of sulfadiazine on abundance and diversity of denitrifying bacteria by determining nirK and nirSgenes in two arable soils. Microbial Ecology 2010, 60:703-707.
    • (2010) Microbial Ecology , vol.60 , pp. 703-707
    • Kleineidam, K.1    Sharma, S.2    Kotzerke, A.3    Heuer, H.4    Thiele-Bruhn, S.5    Smalla, K.6    Wilke, B.-M.7    Schloter, M.8
  • 37
    • 14644399291 scopus 로고    scopus 로고
    • Effects of transgenic potatoes with an altered starch composition on the diversity of soil and rhizosphere bacteria and fungi
    • Milling A., Smalla K., Maidl F., Schloter M., Munch J. Effects of transgenic potatoes with an altered starch composition on the diversity of soil and rhizosphere bacteria and fungi. Plant and Soil 2005, 266:23-39.
    • (2005) Plant and Soil , vol.266 , pp. 23-39
    • Milling, A.1    Smalla, K.2    Maidl, F.3    Schloter, M.4    Munch, J.5
  • 38
    • 79551651757 scopus 로고    scopus 로고
    • Soil amendment with agro-industrial byproducts: molecular-chemical compositions and effects on soil biochemical activities and phosphorus fractions
    • Negassa W., Baum C., Leinweber P. Soil amendment with agro-industrial byproducts: molecular-chemical compositions and effects on soil biochemical activities and phosphorus fractions. Journal of Plant Nutrition and Soils Science 2011, 174:113-120.
    • (2011) Journal of Plant Nutrition and Soils Science , vol.174 , pp. 113-120
    • Negassa, W.1    Baum, C.2    Leinweber, P.3
  • 39
    • 78650368366 scopus 로고    scopus 로고
    • Effect of sulfadiazine-contaminated pig manure on the abundances of genes and transcripts involved in nitrogen transformation in the root-rhizosphere complexes of maize and clover
    • Ollivier J., Kleineidam K., Reichel R., Thiele-Bruhn S., Kotzerke A., Kindler R., Wilke B.-M., Schloter M. Effect of sulfadiazine-contaminated pig manure on the abundances of genes and transcripts involved in nitrogen transformation in the root-rhizosphere complexes of maize and clover. Applied and Environmental Microbiology 2010, 76:7903-7909.
    • (2010) Applied and Environmental Microbiology , vol.76 , pp. 7903-7909
    • Ollivier, J.1    Kleineidam, K.2    Reichel, R.3    Thiele-Bruhn, S.4    Kotzerke, A.5    Kindler, R.6    Wilke, B.-M.7    Schloter, M.8
  • 40
    • 0030111886 scopus 로고    scopus 로고
    • Soil bacteria respond to presence of roots but not to mycelium of arbuscular mycorrhizal fungi
    • Olsson P.A., Bååth E., Jakobsen I., Söderström B. Soil bacteria respond to presence of roots but not to mycelium of arbuscular mycorrhizal fungi. Soil Biology and Biochemistry 1996, 28:463-470.
    • (1996) Soil Biology and Biochemistry , vol.28 , pp. 463-470
    • Olsson, P.A.1    Bååth, E.2    Jakobsen, I.3    Söderström, B.4
  • 41
    • 0018904788 scopus 로고
    • Effect of antibiotics in beef cattle feces on nitrogen and carbon mineralization in soil and on plant growth and composition
    • Patten D.K., Wolf D.C., Kunkle W.E., Douglass L.W. Effect of antibiotics in beef cattle feces on nitrogen and carbon mineralization in soil and on plant growth and composition. Journal of Environmental Quality 1980, 9:167-172.
    • (1980) Journal of Environmental Quality , vol.9 , pp. 167-172
    • Patten, D.K.1    Wolf, D.C.2    Kunkle, W.E.3    Douglass, L.W.4
  • 46
    • 33747876745 scopus 로고    scopus 로고
    • A global perspective on the use, sales, exposure pathways, occurrence, fate and effects of veterinary antibiotics (VAs) in the environment
    • Sarmah A.K., Meyer M.T., Boxall A.B.A. A global perspective on the use, sales, exposure pathways, occurrence, fate and effects of veterinary antibiotics (VAs) in the environment. Chemosphere 2006, 65:725-759.
    • (2006) Chemosphere , vol.65 , pp. 725-759
    • Sarmah, A.K.1    Meyer, M.T.2    Boxall, A.B.A.3
  • 47
    • 1242309413 scopus 로고    scopus 로고
    • Pollution-induced community tolerance of soil microbial communities caused by the antibiotic sulfachloropyridazine
    • Schmitt H., Van Beelen P., Tolls J., Van Leeuwen C.L. Pollution-induced community tolerance of soil microbial communities caused by the antibiotic sulfachloropyridazine. Environmental Science and Technology 2004, 38:1148-1153.
    • (2004) Environmental Science and Technology , vol.38 , pp. 1148-1153
    • Schmitt, H.1    Van Beelen, P.2    Tolls, J.3    Van Leeuwen, C.L.4
  • 48
    • 0032811260 scopus 로고    scopus 로고
    • Interactions of dissolved organic matter with xenobiotic compounds: molecular modeling in water
    • Schulten H.R. Interactions of dissolved organic matter with xenobiotic compounds: molecular modeling in water. Environmental Toxicology and Chemistry 1999, 18:1643-1655.
    • (1999) Environmental Toxicology and Chemistry , vol.18 , pp. 1643-1655
    • Schulten, H.R.1
  • 49
    • 0033023787 scopus 로고    scopus 로고
    • Thermal stability and composition of mineral-bound organic matter in density fractions of soil
    • Schulten H.-R., Leinweber P. Thermal stability and composition of mineral-bound organic matter in density fractions of soil. European Journal of Soil Science 1999, 50:237-248.
    • (1999) European Journal of Soil Science , vol.50 , pp. 237-248
    • Schulten, H.-R.1    Leinweber, P.2
  • 50
    • 0035487320 scopus 로고    scopus 로고
    • Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed
    • Smalla K., Wieland G., Buchner A., Zock A., Parzy J., Kaiser S., Roskot N., Heuer H., Berg G. Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed. Applied Environmental Microbiology 2001, 67:4742-4751.
    • (2001) Applied Environmental Microbiology , vol.67 , pp. 4742-4751
    • Smalla, K.1    Wieland, G.2    Buchner, A.3    Zock, A.4    Parzy, J.5    Kaiser, S.6    Roskot, N.7    Heuer, H.8    Berg, G.9
  • 51
    • 15244356720 scopus 로고    scopus 로고
    • Effects of sulfonamide and tetracycline antibiotics on soil microbial activity and microbial biomass
    • Thiele-Bruhn S., Beck I.-C. Effects of sulfonamide and tetracycline antibiotics on soil microbial activity and microbial biomass. Chemosphere 2005, 59:457-465.
    • (2005) Chemosphere , vol.59 , pp. 457-465
    • Thiele-Bruhn, S.1    Beck, I.-C.2
  • 53
    • 0032915311 scopus 로고    scopus 로고
    • Principal response curves: analysis of time-dependent multivariate responses of biological community to stress
    • Van den Brink P.J., Braak C.J.F.T. Principal response curves: analysis of time-dependent multivariate responses of biological community to stress. Environmental Toxicology and Chemistry 1999, 18:138-148.
    • (1999) Environmental Toxicology and Chemistry , vol.18 , pp. 138-148
    • Van den Brink, P.J.1    Braak, C.J.F.T.2
  • 55
    • 67650376010 scopus 로고    scopus 로고
    • Influence of oxytetracycline on the structure and activity of microbial community in wheat rhizosphere soil
    • Yang Q., Zhang J., Zhu K., Zhang H. Influence of oxytetracycline on the structure and activity of microbial community in wheat rhizosphere soil. Journal of Environmental Sciences 2009, 21:954-959.
    • (2009) Journal of Environmental Sciences , vol.21 , pp. 954-959
    • Yang, Q.1    Zhang, J.2    Zhu, K.3    Zhang, H.4
  • 56
    • 70350534262 scopus 로고    scopus 로고
    • A conceptual model describing the fate of sulfadiazine and its metabolites observed in manure-amended soils
    • Zarfl C., Klasmeier J., Matthies M. A conceptual model describing the fate of sulfadiazine and its metabolites observed in manure-amended soils. Chemosphere 2009, 77:720-726.
    • (2009) Chemosphere , vol.77 , pp. 720-726
    • Zarfl, C.1    Klasmeier, J.2    Matthies, M.3
  • 57
    • 43949170345 scopus 로고
    • Fractionation of fatty acids derived from soil lipids by solid phase extraction and their quantitative analysis by GC-MS
    • Zelles L., Bai Q.Y. Fractionation of fatty acids derived from soil lipids by solid phase extraction and their quantitative analysis by GC-MS. Soil Biology and Biochemistry 1993, 25:495-507.
    • (1993) Soil Biology and Biochemistry , vol.25 , pp. 495-507
    • Zelles, L.1    Bai, Q.Y.2
  • 58
    • 33746582264 scopus 로고    scopus 로고
    • Impact of sulfadiazine and chlorotetracycline on soil bacterial community structure and respiratory activity
    • Zielezny Y., Groeneweg J., Vereecken H., Tappe W. Impact of sulfadiazine and chlorotetracycline on soil bacterial community structure and respiratory activity. Soil Biology and Biochemistry 2006, 38:2372-2380.
    • (2006) Soil Biology and Biochemistry , vol.38 , pp. 2372-2380
    • Zielezny, Y.1    Groeneweg, J.2    Vereecken, H.3    Tappe, W.4


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