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Volumn 71, Issue 2, 2005, Pages 993-1003

Assessment of genotypic diversity of antibiotic-producing Pseudomonas species in the rhizosphere by denaturing gradient gel electrophoresis

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; BIOSYNTHESIS; DISEASE CONTROL; GENES; PLANTS (BOTANY);

EID: 13544264433     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.71.2.993-1003.2005     Document Type: Article
Times cited : (42)

References (58)
  • 1
    • 0032912472 scopus 로고    scopus 로고
    • Identification and characterization of a gene cluster for synthesis of the polyketides antibiotic 2,4-diacetylphloroglucinol from Pseudomonas fluorescens Q2-87
    • Bangera, M. G., and L. S. Thomashow. 1999. Identification and characterization of a gene cluster for synthesis of the polyketides antibiotic 2,4-diacetylphloroglucinol from Pseudomonas fluorescens Q2-87. J. Bacteriol. 181:3155-3163.
    • (1999) J. Bacteriol. , vol.181 , pp. 3155-3163
    • Bangera, M.G.1    Thomashow, L.S.2
  • 2
    • 0036202170 scopus 로고    scopus 로고
    • Evaluation of nested PCR-DGGE (denaturing gradient gel electrophoresis) with group-specific 16S rRNA primers for the analysis of bacterial communities from different wastewater treatment plants
    • Boon, N., W. de Windt, W. Verstraete, and E. M. Top. 2002. Evaluation of nested PCR-DGGE (denaturing gradient gel electrophoresis) with group-specific 16S rRNA primers for the analysis of bacterial communities from different wastewater treatment plants. FEMS Microbiol. Ecol. 39:101-112.
    • (2002) FEMS Microbiol. Ecol. , vol.39 , pp. 101-112
    • Boon, N.1    De Windt, W.2    Verstraete, W.3    Top, E.M.4
  • 3
    • 0033860832 scopus 로고    scopus 로고
    • rpoB-based microbial community analysis avoids limitations inherent in 16S rRNA gene intraspecies heterogeneity
    • Dahllof, I., H. Baillie, and S. Kjelleberg. 2000. rpoB-based microbial community analysis avoids limitations inherent in 16S rRNA gene intraspecies heterogeneity. Appl. Environ. Microbiol. 66:3376-3380.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 3376-3380
    • Dahllof, I.1    Baillie, H.2    Kjelleberg, S.3
  • 4
    • 0037214694 scopus 로고    scopus 로고
    • Frequency, diversity and activity of 2,4-diacetylphloroglucinol-producing fluorescent Pseudomonas spp. in Dutch take-all decline soils
    • De Souza, J. T., D. M. Weller, and J. M. Raaijmakers. 2003. Frequency, diversity and activity of 2,4-diacetylphloroglucinol-producing fluorescent Pseudomonas spp. in Dutch take-all decline soils. Phytopathology 93:54-63.
    • (2003) Phytopathology , vol.93 , pp. 54-63
    • De Souza, J.T.1    Weller, D.M.2    Raaijmakers, J.M.3
  • 5
    • 0037316434 scopus 로고    scopus 로고
    • Polymorphisms within the prnD and pltC genes from pyrrolnitrin and pyoluteorin-producing Pseudomonas and Burkholderia spp
    • De Souza, J. T., and J. M. Raaijmakers. 2003. Polymorphisms within the prnD and pltC genes from pyrrolnitrin and pyoluteorin-producing Pseudomonas and Burkholderia spp. FEMS Microbiol. Ecol. 43:21-34.
    • (2003) FEMS Microbiol. Ecol. , vol.43 , pp. 21-34
    • De Souza, J.T.1    Raaijmakers, J.M.2
  • 6
    • 0347567131 scopus 로고    scopus 로고
    • Conservation of the response regulator gene gacA in Pseudomonas species
    • De Souza, J. T., M. Mazzola, and J. M. Raaijmakers. 2003. Conservation of the response regulator gene gacA in Pseudomonas species. Environ. Microbiol. 5:1328-1340.
    • (2003) Environ. Microbiol. , vol.5 , pp. 1328-1340
    • De Souza, J.T.1    Mazzola, M.2    Raaijmakers, J.M.3
  • 7
    • 0031791939 scopus 로고    scopus 로고
    • Analysis of the dynamics of bacterial communities in the rhizosphere of chrysanthemum via denaturing gradient gel electrophoresis and substrate utilization patterns
    • Duineveld, B. M., A. S. Rosado, J. D. van Elsas, and J. A. van Veen. 1998. Analysis of the dynamics of bacterial communities in the rhizosphere of chrysanthemum via denaturing gradient gel electrophoresis and substrate utilization patterns. Appl. Environ. Microbiol. 64:4950-4957.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 4950-4957
    • Duineveld, B.M.1    Rosado, A.S.2    Van Elsas, J.D.3    Van Veen, J.A.4
  • 8
    • 0026495201 scopus 로고
    • Exploitation of genes involved in 2,4-diacetylphloroglucinol biosynthesis to confer a new biocontrol capability to a Pseudomonas strain
    • Fenton, A. M., P. M. Stephens, J. Crowley, M. O'Callaghan, and F. O'Gara. 1992. Exploitation of genes involved in 2,4-diacetylphloroglucinol biosynthesis to confer a new biocontrol capability to a Pseudomonas strain. Appl. Environ. Microbiol. 58:3873-3878.
    • (1992) Appl. Environ. Microbiol. , vol.58 , pp. 3873-3878
    • Fenton, A.M.1    Stephens, P.M.2    Crowley, J.3    O'Callaghan, M.4    O'Gara, F.5
  • 9
    • 0002747537 scopus 로고
    • Protection of cucumber plants against black root rot caused by Phomopsis sclerotioides with rhizobacteria
    • C. Keel, B. Koller, and G. Defago (ed.), IOBC/WPRS bulletin XIV/8. IOBC/WPRS, Interlaken, Switzerland
    • Fuchs, J., and G. Defago. 1991. Protection of cucumber plants against black root rot caused by Phomopsis sclerotioides with rhizobacteria, p. 57-62. In C. Keel, B. Koller, and G. Defago (ed.), Plant growth-promoting rhizobacteria - progress and prospects. IOBC/WPRS bulletin XIV/8. IOBC/WPRS, Interlaken, Switzerland.
    • (1991) Plant Growth-promoting Rhizobacteria - Progress and Prospects , pp. 57-62
    • Fuchs, J.1    Defago, G.2
  • 10
    • 0042709557 scopus 로고    scopus 로고
    • Predominant Bacillus sp. in agricultural soil under different management regimes detected via PCR-DGGE
    • Garbeva, P., J. A. van Veen, and J. D. van Elsas. 2003. Predominant Bacillus sp. in agricultural soil under different management regimes detected via PCR-DGGE. Microb. Ecol. 45:302-316.
    • (2003) Microb. Ecol. , vol.45 , pp. 302-316
    • Garbeva, P.1    Van Veen, J.A.2    Van Elsas, J.D.3
  • 11
    • 1642319618 scopus 로고    scopus 로고
    • Assessment of the diversity, and antagonism toward Rhizoctonia solani AG3, of Pseudomonas species in soil from different agricultural regimes
    • Garbeva, P., J. A. van Veen, and J. D. van Elsas. 2003. Assessment of the diversity, and antagonism toward Rhizoctonia solani AG3, of Pseudomonas species in soil from different agricultural regimes. FEMS Microbiol. Ecol. 47:51-64.
    • (2003) FEMS Microbiol. Ecol. , vol.47 , pp. 51-64
    • Garbeva, P.1    Van Veen, J.A.2    Van Elsas, J.D.3
  • 12
    • 0242507789 scopus 로고    scopus 로고
    • Regulation of antibiotic production in root-colonizing Pseudomonas spp. and relevance for biological control of plant disease
    • Haas, D., and C. Keel. 2003. Regulation of antibiotic production in root-colonizing Pseudomonas spp. and relevance for biological control of plant disease. Annu. Rev. Phytopathol. 41:117-153.
    • (2003) Annu. Rev. Phytopathol. , vol.41 , pp. 117-153
    • Haas, D.1    Keel, C.2
  • 13
    • 0002443121 scopus 로고
    • Purification of an antibiotic effective against Gaumannomyces graminis var. tritici produced by a biocontrol agent, Pseudomonas aureofaciens
    • Harrison, L. A., L. Letendre, P. Kovacevich, E. Pierson, and D. M. Weller. 1993. Purification of an antibiotic effective against Gaumannomyces graminis var. tritici produced by a biocontrol agent, Pseudomonas aureofaciens. Soil Biol. Biochem. 25:215-221.
    • (1993) Soil Biol. Biochem. , vol.25 , pp. 215-221
    • Harrison, L.A.1    Letendre, L.2    Kovacevich, P.3    Pierson, E.4    Weller, D.M.5
  • 14
    • 0002912874 scopus 로고    scopus 로고
    • Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) for studying soil microbial communities
    • J. D. van Elsas, E. M. H. Wellington, and J. T. Trevors (ed.), Marcel Dekker, New York. N.Y.
    • Heuer, H., and K. Smalla. 1997. Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) for studying soil microbial communities, p. 353-373. In J. D. van Elsas, E. M. H. Wellington, and J. T. Trevors (ed.), Modern soil microbiology. Marcel Dekker, New York. N.Y.
    • (1997) Modern Soil Microbiology , pp. 353-373
    • Heuer, H.1    Smalla, K.2
  • 15
    • 0030739128 scopus 로고    scopus 로고
    • Analysis of actinomycete communities by specific amplification of genes encoding 16 rRNA and gel-electrophoretic separation in denaturing gradients
    • Hener, H., M. Krsek, P. Baker, K. Smalla, and E. M. H. Wellington. 1997. Analysis of actinomycete communities by specific amplification of genes encoding 16 rRNA and gel-electrophoretic separation in denaturing gradients. Appl. Environ. Microbiol. 63:3233-3241.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 3233-3241
    • Hener, H.1    Krsek, M.2    Baker, P.3    Smalla, K.4    Wellington, E.M.H.5
  • 16
    • 0000625018 scopus 로고
    • Control of Rhizoctonia solani on cotton seedlings with Pseudomonas fluorescens and with an antibiotic produced by the bacterium
    • Howell, C. R., and R. D. Stipanovic. 1979. Control of Rhizoctonia solani on cotton seedlings with Pseudomonas fluorescens and with an antibiotic produced by the bacterium. Phytopathology 69:480-482.
    • (1979) Phytopathology , vol.69 , pp. 480-482
    • Howell, C.R.1    Stipanovic, R.D.2
  • 19
    • 0030070616 scopus 로고    scopus 로고
    • Conservation of the 2,4-diacetylphloroglucinol biosynthesis locus among fluorescent Pseudomonas strains from diverse geographic locations
    • Keel, C., D. M. Weller, A. Natsch, G. Défago, R. J. Cook, and L. S. Thomashow. 1996. Conservation of the 2,4-diacetylphloroglucinol biosynthesis locus among fluorescent Pseudomonas strains from diverse geographic locations. Appl. Environ. Microbiol. 62:552-563.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 552-563
    • Keel, C.1    Weller, D.M.2    Natsch, A.3    Défago, G.4    Cook, R.J.5    Thomashow, L.S.6
  • 20
    • 43349086724 scopus 로고
    • Two simple media for demonstration of pyocyanin and fluorescein
    • King, E. O., M. K. Ward, and D. E. Raney. 1954. Two simple media for demonstration of pyocyanin and fluorescein. J. Lab. Clin. Med. 44:301-307.
    • (1954) J. Lab. Clin. Med. , vol.44 , pp. 301-307
    • King, E.O.1    Ward, M.K.2    Raney, D.E.3
  • 22
    • 0030901922 scopus 로고    scopus 로고
    • Analysis of ammonia-oxidizing bacteria of the beta subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR-amplified 16S ribosomal DNA fragments
    • Kowalchuk, G. A., J. R. Stephen, W. de Boer, J. I. Prosser, T. M. Embley, and J. W. Woldendorp. 1997. Analysis of ammonia-oxidizing bacteria of the beta subdivision of the class Proteobacteria in coastal sand dunes by denaturing gradient gel electrophoresis and sequencing of PCR-amplified 16S ribosomal DNA fragments. Appl. Environ. Microbiol. 63:1489-1497.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 1489-1497
    • Kowalchuk, G.A.1    Stephen, J.R.2    De Boer, W.3    Prosser, J.I.4    Embley, T.M.5    Woldendorp, J.W.6
  • 23
    • 0036307715 scopus 로고    scopus 로고
    • Differential ability of genotypes of 2,4-diacetylphloroglucinol-producing Pseudomonas fluorescens strains to colonize the roots of pea plants
    • Landa, B. B., O. V. Mavrodi, J. M. Raaijmakers, B. B. McSpadden-Gardener, L. S. Thomashow, and D. M. Weller. 2002. Differential ability of genotypes of 2,4-diacetylphloroglucinol-producing Pseudomonas fluorescens strains to colonize the roots of pea plants. Appl. Environ. Microbiol. 68:3226-3237.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 3226-3237
    • Landa, B.B.1    Mavrodi, O.V.2    Raaijmakers, J.M.3    McSpadden-Gardener, B.B.4    Thomashow, L.S.5    Weller, D.M.6
  • 24
    • 0042200426 scopus 로고    scopus 로고
    • Interactions between strains of 2,4-diacetylphloroglucinol-producing Pseudomonas fluorescens in the rhizosphere of wheat
    • Landa, B. B., D. M. Mavrodi, L. S. Thomashow, and D. M. Weller. 2003. Interactions between strains of 2,4-diacetylphloroglucinol-producing Pseudomonas fluorescens in the rhizosphere of wheat. Phytopathology 93:982-994.
    • (2003) Phytopathology , vol.93 , pp. 982-994
    • Landa, B.B.1    Mavrodi, D.M.2    Thomashow, L.S.3    Weller, D.M.4
  • 25
    • 0033823656 scopus 로고    scopus 로고
    • Molecular analysis of diazotroph diversity in the rhizosphere of smooth cordgrass, Spartina alterniflora
    • Lovell, C. R., Y. M. Piceno, J. M. Quattro, and C. E. Bagwell. 2000. Molecular analysis of diazotroph diversity in the rhizosphere of smooth cordgrass, Spartina alterniflora. Appl. Environ. Microbiol. 66:3814-3822.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 3814-3822
    • Lovell, C.R.1    Piceno, Y.M.2    Quattro, J.M.3    Bagwell, C.E.4
  • 26
    • 0031967839 scopus 로고    scopus 로고
    • A seven-gene locus for synthesis of phenazine-1-carboxylic acid by Pseudomonas fluorescens 2-79
    • Mavrodi, D. V., V. N. Ksenzenko, R. F. Bonsall, R. J. Cook, A. M. Boronin, and L. S. Thomashow. 1998. A seven-gene locus for synthesis of phenazine-1-carboxylic acid by Pseudomonas fluorescens 2-79. J. Bacteriol. 180:2541-2548.
    • (1998) J. Bacteriol. , vol.180 , pp. 2541-2548
    • Mavrodi, D.V.1    Ksenzenko, V.N.2    Bonsall, R.F.3    Cook, R.J.4    Boronin, A.M.5    Thomashow, L.S.6
  • 27
    • 0036795113 scopus 로고    scopus 로고
    • Identification of differences in genome content among phlD-positive Pseudomonas fluorescens strains by using PCR-based subtractive hybridization
    • Mavrodi, D. V., O. V. Mavrodi, B. B. McSpadden-Gardener, B. B. Landa, D. M. Weller, and L. S. Thomashow. 2002. Identification of differences in genome content among phlD-positive Pseudomonas fluorescens strains by using PCR-based subtractive hybridization. Appl. Environ. Microbiol. 68:5170-5176.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 5170-5176
    • Mavrodi, D.V.1    Mavrodi, O.V.2    McSpadden-Gardener, B.B.3    Landa, B.B.4    Weller, D.M.5    Thomashow, L.S.6
  • 29
    • 4744339126 scopus 로고    scopus 로고
    • Wheat cultivar-specific selection of 2,4-diacetylphloroglucinol-producing fluorescent Pseudomonas species from resident soil population
    • in press
    • Mazzola, M., D. L. Funnell, and J. M. Raaijmakers. Wheat cultivar-specific selection of 2,4-diacetylphloroglucinol-producing fluorescent Pseudomonas species from resident soil population. Microb. Ecol., in press.
    • Microb. Ecol.
    • Mazzola, M.1    Funnell, D.L.2    Raaijmakers, J.M.3
  • 31
    • 85047683437 scopus 로고    scopus 로고
    • Changes in populations of rhizosphere bacteria associated with take-all of wheat
    • McSpadden-Gardener, B. B., and D. M. Weller. 2001. Changes in populations of rhizosphere bacteria associated with take-all of wheat. Appl. Environ. Microbiol. 67:4414-4425.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 4414-4425
    • McSpadden-Gardener, B.B.1    Weller, D.M.2
  • 32
    • 0035131007 scopus 로고    scopus 로고
    • A rapid polymerase chain reaction-based assay characterizing rhizosphere populations of 2,4-diacetylphloroglucinol-producing bacteria
    • McSpadden-Gardener, B. B., D. V. Mavrodi, L. S. Thomashow, and D. M. Weller. 2001. A rapid polymerase chain reaction-based assay characterizing rhizosphere populations of 2,4-diacetylphloroglucinol-producing bacteria. Phytopathology 91:44-54.
    • (2001) Phytopathology , vol.91 , pp. 44-54
    • McSpadden-Gardener, B.B.1    Mavrodi, D.V.2    Thomashow, L.S.3    Weller, D.M.4
  • 33
    • 0001868073 scopus 로고    scopus 로고
    • Denaturing gradient gel electrophoresis (DGGE) in microbial ecology
    • A. D. L. Akkermans, J. D. van Elsas, and F. J. de Bruin (ed.), vol. 3.4.4. Kluwer Academic Publishers, Dordrecht, The Netherlands
    • Muyzer, G., T. Brinkhoff, U. Nubel, C. Santegoeds, H. Schafer, and C. Wawer. 1997. Denaturing gradient gel electrophoresis (DGGE) in microbial ecology, p. 1-27. In A. D. L. Akkermans, J. D. van Elsas, and F. J. de Bruin (ed.), Molecular microbial ecology manual, vol. 3.4.4. Kluwer Academic Publishers, Dordrecht, The Netherlands.
    • (1997) Molecular Microbial Ecology Manual , pp. 1-27
    • Muyzer, G.1    Brinkhoff, T.2    Nubel, U.3    Santegoeds, C.4    Schafer, H.5    Wawer, C.6
  • 34
    • 0031959006 scopus 로고    scopus 로고
    • Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology
    • Muyzer, G., and K. Smalla. 1998. Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology. Antonie Leeuwenhoek 73:127-141.
    • (1998) Antonie Leeuwenhoek , vol.73 , pp. 127-141
    • Muyzer, G.1    Smalla, K.2
  • 35
    • 0027460328 scopus 로고
    • Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of PCR-amplified genes coding for 16S rRNA
    • Muyzer, G. E., C. De Waa'l, and A. G. Uitterlinden. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of PCR-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59:695-700.
    • (1993) Appl. Environ. Microbiol. , vol.59 , pp. 695-700
    • Muyzer, G.E.1    De Waa'l, C.2    Uitterlinden, A.G.3
  • 36
    • 0032985537 scopus 로고    scopus 로고
    • Identification of a novel group of bacteria in sludge from a deteriorated biological phosphorus removal reactor
    • Nielsen, A. T., W. T. Liu, C. Filipe, L. Grady, S. Molin, and D. A. Stahl. 1999. Identification of a novel group of bacteria in sludge from a deteriorated biological phosphorus removal reactor. Appl. Environ. Microbiol. 65:1251-1258.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 1251-1258
    • Nielsen, A.T.1    Liu, W.T.2    Filipe, C.3    Grady, L.4    Molin, S.5    Stahl, D.A.6
  • 37
    • 0034010852 scopus 로고    scopus 로고
    • Frequency and diversity of 2,4-diacetylphloroglucinol-producing bacteria isolated from the maize rhizosphere at different stages of growth
    • Picard, C., F. Di Cello, M. Ventura, R. Fani, and A. Guckert. 2000. Frequency and diversity of 2,4-diacetylphloroglucinol-producing bacteria isolated from the maize rhizosphere at different stages of growth. Appl. Environ. Microbiol. 66:948-955.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 948-955
    • Picard, C.1    Di Cello, F.2    Ventura, M.3    Fani, R.4    Guckert, A.5
  • 38
    • 0037469587 scopus 로고    scopus 로고
    • Genetic diversity of phlD gene from 2,4-diacetylphloroglucinol-producing Pseudomonas spp. strains from the maize rhizosphere
    • Picard, C., and M. Bosco. 2003. Genetic diversity of phlD gene from 2,4-diacetylphloroglucinol-producing Pseudomonas spp. strains from the maize rhizosphere. FEMS Microbiol. Lett. 219:167-172.
    • (2003) FEMS Microbiol. Lett. , vol.219 , pp. 167-172
    • Picard, C.1    Bosco, M.2
  • 40
    • 0035375263 scopus 로고    scopus 로고
    • Exploiting genotypic diversity of 2,4-diacetylphloroglucinol-producing Pseudomonas spp.: Characterization of superior root-colonizing P. fluorescent strain Q8r1-96
    • Raaijmakers, J. M., and D. M. Weller. 2001. Exploiting genotypic diversity of 2,4-diacetylphloroglucinol-producing Pseudomonas spp.: characterization of superior root-colonizing P. fluorescent strain Q8r1-96. Appl. Environ. Microbiol. 67:2545-2554.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 2545-2554
    • Raaijmakers, J.M.1    Weller, D.M.2
  • 41
  • 42
    • 0035059326 scopus 로고    scopus 로고
    • Polymorphism of the polyketide synthase gene phlD in biocontrol fluorescent pseudomonads producing 2,4-diacetylphloroglucinol and comparison of phlD with plant polyketide synthases
    • Ramette, A., Y. Moënne-Loccoz, and G. Défago. 2001. Polymorphism of the polyketide synthase gene phlD in biocontrol fluorescent pseudomonads producing 2,4-diacetylphloroglucinol and comparison of phlD with plant polyketide synthases. Mol. Plant-Microbe Interact. 14:639-652.
    • (2001) Mol. Plant-Microbe Interact. , vol.14 , pp. 639-652
    • Ramette, A.1    Moënne-Loccoz, Y.2    Défago, G.3
  • 43
    • 0041881881 scopus 로고    scopus 로고
    • Prevalence of fluorescent pseudomonads producing antifungal phloroglucinols and/or hydrogen cyanide in soils naturally suppressive or conducive to tobacco black root rot
    • Ramette, A., Y. Moënne-Loccoz, and G. Défago. 2003. Prevalence of fluorescent pseudomonads producing antifungal phloroglucinols and/or hydrogen cyanide in soils naturally suppressive or conducive to tobacco black root rot. FEMS Microbiol. Ecol. 44:35-43.
    • (2003) FEMS Microbiol. Ecol. , vol.44 , pp. 35-43
    • Ramette, A.1    Moënne-Loccoz, Y.2    Défago, G.3
  • 44
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saito, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saito, N.1    Nei, M.2
  • 45
    • 0036208363 scopus 로고    scopus 로고
    • Molecular method to assess the diversity of Burkholderia species in environmental samples
    • Salles, J. F., F. A. De Souza, and J. D. van Elsas. 2002. Molecular method to assess the diversity of Burkholderia species in environmental samples. Appl. Environ. Microbiol. 68:1595-1603.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 1595-1603
    • Salles, J.F.1    De Souza, F.A.2    Van Elsas, J.D.3
  • 46
    • 2142686619 scopus 로고    scopus 로고
    • Specific and sensitive detection of Ralstonia solanacearum in soil on the basis of PCR amplification of fliC fragments
    • Schonfeld, J., H. Heuer, J. D. van Elsas, and K. Smalla. 2003. Specific and sensitive detection of Ralstonia solanacearum in soil on the basis of PCR amplification of fliC fragments. Appl. Environ. Microbiol. 69:7248-7256.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 7248-7256
    • Schonfeld, J.1    Heuer, H.2    Van Elsas, J.D.3    Smalla, K.4
  • 47
    • 0031735167 scopus 로고    scopus 로고
    • Biocontrol of soil-borne fungal plant diseases by 2,4- diacetylphloroglucinol-producing fluorescent pseudomonads with different restriction profiles of amplified 16S rDNA
    • Sharifi-Tehrani, A., M. Zala, A. Natsch, Y. Moënne-Loccoz, and G. Défago. 1998. Biocontrol of soil-borne fungal plant diseases by 2,4-diacetylphloroglucinol-producing fluorescent pseudomonads with different restriction profiles of amplified 16S rDNA. Eur. J. Plant Pathol. 104:631-643.
    • (1998) Eur. J. Plant Pathol. , vol.104 , pp. 631-643
    • Sharifi-Tehrani, A.1    Zala, M.2    Natsch, A.3    Moënne-Loccoz, Y.4    Défago, G.5
  • 48
    • 0016271859 scopus 로고
    • The use of ampicillin in a simple selective medium for the isolation of fluorescent pseudomonads
    • Simon, A., and E. H. Ridge. 1974. The use of ampicillin in a simple selective medium for the isolation of fluorescent pseudomonads. J. Appl. Bacteriol. 37:459-460.
    • (1974) J. Appl. Bacteriol. , vol.37 , pp. 459-460
    • Simon, A.1    Ridge, E.H.2
  • 49
    • 0001268027 scopus 로고
    • Naturally occurring fluorescent pseudomonads involved in suppression of black root rot of tobacco
    • Stutz, E., G. Defago, and H. Kern. 1986. Naturally occurring fluorescent pseudomonads involved in suppression of black root rot of tobacco. Phytopathology 76:181-185.
    • (1986) Phytopathology , vol.76 , pp. 181-185
    • Stutz, E.1    Defago, G.2    Kern, H.3
  • 50
    • 0141788244 scopus 로고    scopus 로고
    • Effect of N-fertilization, plant genotype and environmental conditions on nifti gene pools in roots of rice
    • Tan, Z., T. Hurek, and B. Reinhold-Hurek. 2003. Effect of N-fertilization, plant genotype and environmental conditions on nifti gene pools in roots of rice. Environ. Microbiol. 5:1009-1015.
    • (2003) Environ. Microbiol. , vol.5 , pp. 1009-1015
    • Tan, Z.1    Hurek, T.2    Reinhold-Hurek, B.3
  • 51
    • 0034035471 scopus 로고    scopus 로고
    • Molecular techniques for determining microbial diversity and community structure in natural environments
    • Theron, J., and T. E. Cloete. 2000. Molecular techniques for determining microbial diversity and community structure in natural environments. Crit. Rev. Microbiol. 26:37-57.
    • (2000) Crit. Rev. Microbiol. , vol.26 , pp. 37-57
    • Theron, J.1    Cloete, T.E.2
  • 52
    • 0001277344 scopus 로고    scopus 로고
    • Current concepts in the use of introduced bacteria for biological disease control: Mechanisms and antifungal metabolites
    • G. Stacey and N. T. Keen (ed.), Chapman & Hall, London, United Kingdom
    • Thomashow, L. S., and D. M. Weller. 1996. Current concepts in the use of introduced bacteria for biological disease control: mechanisms and antifungal metabolites, p. 187-236. In G. Stacey and N. T. Keen (ed.), Plant-microbe interactions, vol. 1. Chapman & Hall, London, United Kingdom.
    • (1996) Plant-microbe Interactions , vol.1 , pp. 187-236
    • Thomashow, L.S.1    Weller, D.M.2
  • 53
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 54
    • 0028509254 scopus 로고
    • TREECON for Windows: A software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment
    • Van de Peer, Y., and R. de Wachter. 1994. TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. Comput. Appl. Biosci. 10:569-570.
    • (1994) Comput. Appl. Biosci. , vol.10 , pp. 569-570
    • Van De Peer, Y.1    De Wachter, R.2
  • 55
    • 0031831891 scopus 로고    scopus 로고
    • Microbiological and molecular biological methods for monitoring microbial inoculants and their effects in the soil environment
    • Van Elsas, J. D., G. F. Duarte, A. S. Rosado, and K. Smalla. 1998. Microbiological and molecular biological methods for monitoring microbial inoculants and their effects in the soil environment. J. Microbiol. Methods 32:133-154,
    • (1998) J. Microbiol. Methods , vol.32 , pp. 133-154
    • Van Elsas, J.D.1    Duarte, G.F.2    Rosado, A.S.3    Smalla, K.4
  • 56
    • 0034782216 scopus 로고    scopus 로고
    • Cosmopolitan distribution of phlD-containing dicotyledonous crop-associated biocontrol pseudomonads of worldwide origin
    • Wang, C., A. Ramette, P. Punjasamarnwong, M. Zala, A. Natsch, Y. Moënne-Loccoz, and G. Défago. 2001. Cosmopolitan distribution of phlD-containing dicotyledonous crop-associated biocontrol pseudomonads of worldwide origin. FEMS Microbiol. Ecol. 37:105-116.
    • (2001) FEMS Microbiol. Ecol. , vol.37 , pp. 105-116
    • Wang, C.1    Ramette, A.2    Punjasamarnwong, P.3    Zala, M.4    Natsch, A.5    Moënne-Loccoz, Y.6    Défago, G.7
  • 57
    • 0029077890 scopus 로고
    • Genetic diversity of Desulfovibrio spp. in environmental samples analyzed by denaturing gradient gel electrophoresis of (nifE) hydrogenase gene fragments
    • Wawer, C., and G. Muyzer. 1995. Genetic diversity of Desulfovibrio spp. in environmental samples analyzed by denaturing gradient gel electrophoresis of (nifE) hydrogenase gene fragments. Appl. Environ. Microbiol. 61:2203-2210.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 2203-2210
    • Wawer, C.1    Muyzer, G.2
  • 58
    • 0036028598 scopus 로고    scopus 로고
    • Microbial populations responsible for specific soil suppressiveness to plant pathogens
    • Weller, D. M., J. M. Raaijmakers, B. B. Gardener, and L. S. Thomashow. 2002. Microbial populations responsible for specific soil suppressiveness to plant pathogens. Annu. Rev. Phytopathol. 40:309-348.
    • (2002) Annu. Rev. Phytopathol. , vol.40 , pp. 309-348
    • Weller, D.M.1    Raaijmakers, J.M.2    Gardener, B.B.3    Thomashow, L.S.4


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