메뉴 건너뛰기




Volumn 8, Issue 4, 2012, Pages 383-391

Comparative study of active and inactive hepatocarcinogens using a QSAR-based prediction model

Author keywords

Gene set enrichment analysis (GSEA); Hepatocarcinogen; In vitro assay; Microarray; Principal component analysis (PCA)

Indexed keywords

CARCINOGEN; GLYCYRRHETINIC ACID; GRISEOFULVIN; HEPATOCARCINOGEN; HYDROCORTISONE; LITHOCHOLIC ACID; MONOCROTALINE; PRASTERONE; PREDNISOLONE; PREDNISONE; UNCLASSIFIED DRUG;

EID: 84876211794     PISSN: 1738642X     EISSN: 20928467     Source Type: Journal    
DOI: 10.1007/s13273-012-0047-z     Document Type: Article
Times cited : (1)

References (15)
  • 1
    • 77952130327 scopus 로고    scopus 로고
    • Research at the interface of industry, academia and regulatory science
    • 20458309 10.1038/nbt0510-432 1:CAS:528:DC%2BC3cXlsl2js7s%3D
    • Mattes, W. B. et al. Research at the interface of industry, academia and regulatory science. Nat Biotechnol 28:432-433 (2010).
    • (2010) Nat Biotechnol , vol.28 , pp. 432-433
    • Mattes, W.B.1
  • 2
    • 33747084103 scopus 로고    scopus 로고
    • High concordance of drug-induced human hepatotoxicity with in vitro cytotoxicity measured in a novel cell-based model using high content screening
    • 16598496 10.1007/s00204-006-0091-3
    • O'Brien P. J. et al. High concordance of drug-induced human hepatotoxicity with in vitro cytotoxicity measured in a novel cell-based model using high content screening. Arch Toxicol 80:580-604 (2006).
    • (2006) Arch Toxicol , vol.80 , pp. 580-604
    • O'Brien, P.J.1
  • 3
    • 38149123329 scopus 로고    scopus 로고
    • Toxicity assays in nanodrops combining bioassay and morphometric endpoints
    • 17235363 10.1371/journal.pone.0000163
    • Lemaire, F. et al. Toxicity assays in nanodrops combining bioassay and morphometric endpoints. PLoS ONE 2:e163 (2007).
    • (2007) PLoS ONE , vol.2 , pp. 163
    • Lemaire, F.1
  • 4
    • 1542331973 scopus 로고    scopus 로고
    • Toxicogenomics in risk assessment: An overview of an HESI collaborative research program
    • 15033589 10.1289/ehp.6674
    • Pennie, W., Pettit, S. D. & Lord, P. G. Toxicogenomics in risk assessment: an overview of an HESI collaborative research program. Environ Health Perspect 112:417-419 (2004).
    • (2004) Environ Health Perspect , vol.112 , pp. 417-419
    • Pennie, W.1    Pettit, S.D.2    Lord, P.G.3
  • 5
    • 34547881497 scopus 로고    scopus 로고
    • A gene expression biomarker provides early prediction and mechanistic assessment of hepatic tumor induction by nongenotoxic chemicals
    • 17557906 10.1093/toxsci/kfm156 1:CAS:528:DC%2BD2sXpt1Ciurk%3D
    • Fielden, M. R., Brennan, R. & Gollub, J. A gene expression biomarker provides early prediction and mechanistic assessment of hepatic tumor induction by nongenotoxic chemicals. Toxicol Sci 99:90-100 (2007).
    • (2007) Toxicol Sci , vol.99 , pp. 90-100
    • Fielden, M.R.1    Brennan, R.2    Gollub, J.3
  • 6
    • 27344435774 scopus 로고    scopus 로고
    • Gene set enrichment analysis: A knowledge-based approach for interpreting genomewide expression profiles
    • 16199517 10.1073/pnas.0506580102 1:CAS:528:DC%2BD2MXht1ShtrnO
    • Subramanian, A. et al. Gene set enrichment analysis: a knowledge-based approach for interpreting genomewide expression profiles. Proc Natl Acad Sci U S A 102:15545-15550 (2005).
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 15545-15550
    • Subramanian, A.1
  • 7
    • 77955735744 scopus 로고    scopus 로고
    • A seven-gene set associated with chronic hypoxia of prognostic importance in hepatocellular carcinoma
    • 20592013 10.1158/1078-0432.CCR-09-3274
    • van Malenstein, H. et al. A seven-gene set associated with chronic hypoxia of prognostic importance in hepatocellular carcinoma. Clin Cancer Res 16:4278-4288 (2010).
    • (2010) Clin Cancer Res , vol.16 , pp. 4278-4288
    • Van Malenstein, H.1
  • 8
    • 33947371709 scopus 로고    scopus 로고
    • Comparison of transcriptional responses in liver tissue and primary hepatocyte cell cultures after exposure to hexahydro-1,3,5-trinitro-1,3,5- triazine
    • 17217515 10.1186/1471-2105-7-S4-S22
    • Perkins, E. J. et al. Comparison of transcriptional responses in liver tissue and primary hepatocyte cell cultures after exposure to hexahydro-1,3,5-trinitro-1,3,5-triazine. BMC Bioinformatics 7Suppl 4:S22 (2006).
    • (2006) BMC Bioinformatics , vol.7 , Issue.SUPPL.4 , pp. 22
    • Perkins, E.J.1
  • 9
    • 10744233751 scopus 로고    scopus 로고
    • Use of a low-density microarray for studying gene expression patterns induced by hepatotoxicants on primary cultures of rat hepatocytes
    • 12883083 10.1093/toxsci/kfg196
    • de Longueville, F. et al. Use of a low-density microarray for studying gene expression patterns induced by hepatotoxicants on primary cultures of rat hepatocytes. Toxicol Sci 75:378-392 (2003).
    • (2003) Toxicol Sci , vol.75 , pp. 378-392
    • De Longueville, F.1
  • 10
    • 33845620001 scopus 로고    scopus 로고
    • The ToxCast program for prioritizing toxicity testing of environmental chemicals
    • 16963515 10.1093/toxsci/kfl103 1:CAS:528:DC%2BD28XhtlChtLjK
    • Dix, D. J. et al. The ToxCast program for prioritizing toxicity testing of environmental chemicals. Toxicol Sci 95:5-12 (2007).
    • (2007) Toxicol Sci , vol.95 , pp. 5-12
    • Dix, D.J.1
  • 11
    • 77951675220 scopus 로고    scopus 로고
    • In vitro screening of environmental chemicals for targeted testing prioritization: The Tox-Cast project
    • 20368123 10.1289/ehp.0901392 1:CAS:528:DC%2BC3cXls1ajtrY%3D
    • Judson, R. S. et al. In vitro screening of environmental chemicals for targeted testing prioritization: the Tox-Cast project. Environ Health Perspect 118:485-492 (2010).
    • (2010) Environ Health Perspect , vol.118 , pp. 485-492
    • Judson, R.S.1
  • 12
    • 58149182724 scopus 로고    scopus 로고
    • NCBI GEO: Archive for high-throughput functional genomic data
    • 18940857 10.1093/nar/gkn764 1:CAS:528:DC%2BD1cXhsFejtLnF
    • Barrett, T. et al. NCBI GEO: archive for high-throughput functional genomic data. Nucleic Acids Res 37: D885-890 (2009).
    • (2009) Nucleic Acids Res , vol.37 , pp. 885-890
    • Barrett, T.1
  • 13
    • 58149204055 scopus 로고    scopus 로고
    • ArrayExpress update-from an archive of functional genomics experiments to the atlas of gene expression
    • 19015125 10.1093/nar/gkn889 1:CAS:528:DC%2BD1cXhsFejtL3J
    • Parkinson, H. et al. ArrayExpress update-from an archive of functional genomics experiments to the atlas of gene expression. Nucleic Acids Res 37:D868-872 (2009).
    • (2009) Nucleic Acids Res , vol.37 , pp. 868-872
    • Parkinson, H.1
  • 14
    • 79957985250 scopus 로고    scopus 로고
    • On various metrics used for validation of predictive QSAR models with applications in virtual screening and focused library design
    • 21521150 10.2174/138620711795767893 1:CAS:528:DC%2BC3MXnvVSmt7o%3D
    • Roy, K. & Mitra, I. On various metrics used for validation of predictive QSAR models with applications in virtual screening and focused library design. Comb Chem High Throughput Screen 14:450-474 (2011).
    • (2011) Comb Chem High Throughput Screen , vol.14 , pp. 450-474
    • Roy, K.1    Mitra, I.2
  • 15
    • 79952196849 scopus 로고    scopus 로고
    • Application of QSAR and shape pharmacophore modeling approaches for targeted chemical library design
    • 20981521 10.1007/978-1-60761-931-4-6 1:CAS:528:DC%2BC3cXhsFSrs7vO
    • Ebalunode, J. O., Zheng, W. & Tropsha, A. Application of QSAR and shape pharmacophore modeling approaches for targeted chemical library design. Methods Mol Biol 685:111-133 (2011).
    • (2011) Methods Mol Biol , vol.685 , pp. 111-133
    • Ebalunode, J.O.1    Zheng, W.2    Tropsha, A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.