Controlled deposition and combing of DNA across lithographically defined patterns on silicon

Beilstein Journal of Nanotechnology

Volumn 4, Issue 1, 2013, Pages 72-76

  Nazari, Zeinab Esmail ^a   Gurevich, Leonid ^a  

^a AALBORG UNIVERSITY   (Denmark)

Author keywords

AFM; DNA molecular combing; DNA peptide complexes; Molecular electronics; Surface modification

Indexed keywords

AFM; CONTROLLED DEPOSITION; DNA-PEPTIDE COMPLEXES; DNA-PEPTIDE CONJUGATES; GAS-PHASE DEPOSITION; HYDROPHOBIC SUBSTRATE; MOLECULAR COMBING; SILICON SUBSTRATES;

DEPOSITION; HYDROPHOBICITY; MOLECULAR ELECTRONICS; MOLECULES; SUBSTRATES; SURFACE TREATMENT;

DNA;

EID: 84876103575     PISSN: None     EISSN: 21904286     Source Type: Journal    
DOI: 10.3762/bjnano.4.8     Document Type: Article

References (24)

1. Herrick, J.; Bensimon, A. Introduction to Molecular Combing: Genomics, DNA Replication, and Cancer. In DNA Replication: Methods and Protocols; Vengrova, S.; Dalgaard, J. Z., Eds.; Methods in Molecular Biology, Vol. 521; Humana press: New York, 2009; pp 71-101. doi:10.1007/978-1-60327-815-7
2. Herrick, J.; Bensimon, A. Chromosome Res. 1999, 7, 409-423. doi:10.1023/A:1009276210892
3. Zamora, F.; Amo-Ochoa, M. P.; Sanz Miguel, P. J.; Castillo, O. Inorg. Chim. Acta 2009, 362, 691-706. doi:10.1016/j.ica.2008.02.029
4. Bensimon, D.; Croquette, V.; Bensimon, A.; Simon, A. J. Phys. Rev. Lett. 1995, 74, 4754-4757. doi:10.1103/PhysRevLett.74.4754
5. Strick, T.; Allemand, J. F.; Croquette, V.; Bensimon, D. Prog. Biophys. Mol. Biol. 2000, 74, 115-140. doi:10.1016/S0079-6107(00)00018-3
6. Bensimon, A.; Simon, A.; Chiffaudel, A.; Croquette, V.; Heslot, F.; Bensimon, D. Science 1994, 265, 2096-2098. doi:10.1126/science.7522347
7. Klein, D. C. G.; Gurevich, L.; Janssen, J. W.; Kouwenhoven, L. P.; Carbeck, J. D.; Sohn, L. L. Appl. Phys. Lett. 2001, 78, 2396-2398. doi:10.1063/1.1365099
8. Zheng, H.-Z.; Pang, D.-W.; Lu, Z.-X.; Zhang, Z.-L.; Xie, Z.-X. Biophys. Chem. 2004, 112, 27-33. doi:10.1016/j.bpc.2004.06.011
9. Allemand, J. F.; Bensimon, D.; Jullien, L.; Bensimon, A.; Croquette, V. Biophys. J. 1997, 73, 2064-2070. doi:10.1016/S0006-3495(97)78236-5
10. Stewart, A. Trends Mol. Med. 1998, 4, 2. doi:10.1016/S1357-4310(97)01169-6
11. Zhang, J.; Ma, Y.; Stachura, S.; He, H. Langmuir 2005, 21, 4180-4184. doi:10.1021/la050129s
12. Deng, Z.; Mao, C. Nano Lett. 2003, 3, 1545-1548. doi:10.1021/nl034720q
13. Nakao, H.; Hayashi, H.; Yoshino, T.; Sugiyama, S.; Otobe, K.; Ohtani, T. Nano Lett. 2002, 2, 475-479. doi:10.1021/nl025528b
14. Guan, J.; Lee, L. J. Proc. Natl. Acad. Sci. U. S. A. 2005, 102, 18321-18325. doi:10.1073/pnas.0506902102
15. Porath, D.; Lapidot, N.; Gomez-Herrero, J. Charge Transport in DNA-based Devices. In Introducing Molecular Electronics; Cuniberti, G.; Richter, K.; Fagas, G., Eds.; Springer: Berlin, New York, 2005; pp 411-439. doi:10.1007/b101525
16. Cohen, H.; Nogues, C.; Naaman, R.; Porath, D. Proc. Natl. Acad. Sci. U. S. A. 2005, 102, 11589-11593. doi:10.1073/pnas.0505272102
17. Michalet, X.; Ekong, R.; Fougerousse, F.; Rousseaux, S.; Schurra, C.; Hornigold, N.; van Slegtenhorst, M.; Wolfe, J.; Povey, S.; Beckmann, J. S.; Bensimon, A. Science 1997, 277, 1518-1523. doi:10.1126/science.277.5331.1518
18. Caburet, S.; Conti, C.; Bensimon, A. Trends Biotechnol. 2002, 20, 344-350. doi:10.1016/S0167-7799(02)01990-X
19. Lin, H.-Y.; Tsai, L.-C.; Chi, P.-Y.; Chen, C.-D. Nanotechnology 2005, 16, 2738-2742. doi:10.1088/0957-4484/16/11/046
20. Hölzel, R.; Gajovic-Eichelmann, N.; Bier, F. F. Biosens. Bioelectron. 2003, 18, 555-564. doi:10.1016/S0956-5663(03)00024-1
21. Esmail Nazari, Z. Electrostatic Force Microscopy and Conductivity Measurements of DNA and DNA Derivatives for Applications in Molecular Electronics. Master's Thesis, Aalborg University, Denmark, 2012.
22. Esmail Nazari, Z.; Gurevich,L. Formation of Conductive DNA-Based Nanowires via Conjugation of dsDNA with Cationic Peptide, in preparation.
23. Cerf, A.; Thibault, C.; Geneviève, M.; Vieu, C. Microelectron. Eng. 2009, 86, 1419-1423. doi:10.1016/j.mee.2009.01.057
24. Horcas, I.; Fernández, R.; Gómez-Rodríguez, J. M.; Colchero, J.; Gómez-Herrero, J.; Baro, A. M. Rev. Sci. Instrum. 2007, 78, No. 013705. doi:10.1063/1.2432410