Improving mammalian genome scaffolding using large insert mate-pair next-generation sequencing

BMC Genomics

Volumn 14, Issue 1, 2013, Pages

  van Heesch, Sebastiaan ^a   Kloosterman, Wigard P ^a   Lansu, Nico ^a   Ruzius, Frans Paul ^a   Levandowsky, Elizabeth ^b   Lee, Clarence C ^b   Zhou, Shiguo ^c   Goldstein, Steve ^c   Schwartz, David C ^c   Harkins, Timothy T ^b   Guryev, Victor ^a,d   Cuppen, Edwin ^a  

^a UNIVERSITY MEDICAL CENTER UTRECHT   (Netherlands)

^b Life Technologies Inc   (United States)

^c UNIVERSITY OF WISCONSIN MADISON   (United States)

^d UNIVERSITY MEDICAL CENTER GRONINGEN   (Netherlands)

Author keywords

Contig assembly; Genome scaffolding; Genome structure; Mate pair next generation sequencing; Rat genome

Indexed keywords

CONTIG; GENOMIC DNA;

ANIMAL TISSUE; ARTICLE; GENE LIBRARY; GENE STRUCTURE; GENOME ANALYSIS; MAMMALIAN GENETICS; MATE PAIR NEXT GENERATION SEQUENCING; NONHUMAN; PAIRED END NEXT GENERATION SEQUENCING; QUALITY CONTROL; RAT; SEQUENCE ANALYSIS;

ANIMALS; BASE SEQUENCE; CONTIG MAPPING; GENE LIBRARY; GENOME; INTERSPERSED REPETITIVE SEQUENCES; RATS; SEQUENCE ANALYSIS, DNA;

MAMMALIA; RATTUS; RATTUS NORVEGICUS;

EID: 84876087138     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-14-257     Document Type: Article

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