-
1
-
-
80052519945
-
The huge world of small RNAs: Regulating networks of microRNAs (review)
-
Racz, Z., Kaucsar,T. and Hamar, P. (2011) The huge world of small RNAs: regulating networks of microRNAs (review). Acta. Physiol. Hung., 98, 243-251.
-
(2011)
Acta. Physiol. Hung.
, vol.98
, pp. 243-251
-
-
Racz, Z.1
Kaucsar, T.2
Hamar, P.3
-
2
-
-
80053019485
-
Regulation by small RNAs in bacteria: Expanding frontiers
-
Storz, G., Vogel,J. and Wassarman, K.M. (2011) Regulation by small RNAs in bacteria: expanding frontiers. Mol. Cell, 43, 880-891.
-
(2011)
Mol. Cell
, vol.43
, pp. 880-891
-
-
Storz, G.1
Vogel, J.2
Wassarman, K.M.3
-
3
-
-
79955411900
-
Small RNAs in early mammalian development: From gametes to gastrulation
-
Suh,N. and Blelloch, R. (2011) Small RNAs in early mammalian development: from gametes to gastrulation. Development, 138, 1653-1661.
-
(2011)
Development
, vol.138
, pp. 1653-1661
-
-
Suh, N.1
Blelloch, R.2
-
4
-
-
60149089144
-
Regulatory RNAs in bacteria
-
Waters, L.S. and Storz, G. (2009) Regulatory RNAs in bacteria. Cell, 136, 615-628.
-
(2009)
Cell
, vol.136
, pp. 615-628
-
-
Waters, L.S.1
Storz, G.2
-
5
-
-
70349736084
-
Experimental approaches for the discovery and characterization of regulatory small RNA
-
Sharma, C.M. and Vogel, J. (2009) Experimental approaches for the discovery and characterization of regulatory small RNA. Curr. Opin. Microbiol., 12, 536-546.
-
(2009)
Curr. Opin. Microbiol.
, vol.12
, pp. 536-546
-
-
Sharma, C.M.1
Vogel, J.2
-
6
-
-
61749088917
-
Bacterial chromosome-encoded small regulatory RNAs
-
Brantl, S. (2009) Bacterial chromosome-encoded small regulatory RNAs. Future Microbiol., 4, 85-103.
-
(2009)
Future Microbiol.
, vol.4
, pp. 85-103
-
-
Brantl, S.1
-
7
-
-
34249777280
-
The small RNA RyhB activates the translation of shiA mRNA encoding a permease of shikimate, a compound involved in siderophore synthesis
-
Prevost, K., Salvail, H., Desnoyers, G., Jacques, J.F., Phaneuf,E. and Masse, E. (2007) The small RNA RyhB activates the translation of shiA mRNA encoding a permease of shikimate, a compound involved in siderophore synthesis. Mol. Microbiol., 64, 1260-1273.
-
(2007)
Mol. Microbiol.
, vol.64
, pp. 1260-1273
-
-
Prevost, K.1
Salvail, H.2
Desnoyers, G.3
Jacques, J.F.4
Phaneuf, E.5
Masse, E.6
-
8
-
-
71549126189
-
Activation of gene expression by small RNA
-
Frohlich, K.S. and Vogel, J. (2009) Activation of gene expression by small RNA. Curr. Opin. Microbiol., 12, 674-682.
-
(2009)
Curr. Opin. Microbiol.
, vol.12
, pp. 674-682
-
-
Frohlich, K.S.1
Vogel, J.2
-
9
-
-
33847386673
-
Translational control and target recognition by Escherichia coli small RNAs in vivo
-
Urban, J.H. and Vogel, J. (2007) Translational control and target recognition by Escherichia coli small RNAs in vivo. Nucleic Acids Res., 35, 1018-1037.
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 1018-1037
-
-
Urban, J.H.1
Vogel, J.2
-
10
-
-
68249156618
-
Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiation
-
Pfeiffer, V., Papenfort, K., Lucchini, S., Hinton, J.C. and Vogel, J. (2009) Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiation. Nat. Struct. Mol. Biol., 16, 840-846.
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 840-846
-
-
Pfeiffer, V.1
Papenfort, K.2
Lucchini, S.3
Hinton, J.C.4
Vogel, J.5
-
11
-
-
75249107453
-
Seed-based INTARNA prediction combined with GFP-reporter system identifies mRNA targets of the small RNA Yfr1
-
Richter, A.S., Schleberger, C., Backofen,R. and Steglich, C. (2010) Seed-based INTARNA prediction combined with GFP-reporter system identifies mRNA targets of the small RNA Yfr1. Bioinformatics, 26, 1-5.
-
(2010)
Bioinformatics
, vol.26
, pp. 1-5
-
-
Richter, A.S.1
Schleberger, C.2
Backofen, R.3
Steglich, C.4
-
12
-
-
84859451156
-
The ancestral SgrS RNA discriminates horizontally acquired Salmonella mRNAs through a single G-U wobble pair
-
Papenfort, K., Podkaminski, D., Hinton, J.C. and Vogel, J. (2012) The ancestral SgrS RNA discriminates horizontally acquired Salmonella mRNAs through a single G-U wobble pair. Proc. Natl Acad. Sci. USA, 109, E757-E764.
-
(2012)
Proc. Natl Acad. Sci. USA
, vol.109
-
-
Papenfort, K.1
Podkaminski, D.2
Hinton, J.C.3
Vogel, J.4
-
13
-
-
33746553370
-
Base-pairing requirement for RNA silencing by a bacterial small RNA and acceleration of duplex formation by Hfq
-
Kawamoto, H., Koide, Y., Morita,T. and Aiba, H. (2006) Base-pairing requirement for RNA silencing by a bacterial small RNA and acceleration of duplex formation by Hfq. Mol. Microbiol., 61, 1013-1022.
-
(2006)
Mol. Microbiol.
, vol.61
, pp. 1013-1022
-
-
Kawamoto, H.1
Koide, Y.2
Morita, T.3
Aiba, H.4
-
14
-
-
84867191934
-
Engineering artificial small RNAs for conditional gene silencing in Escherichia coli
-
Sharma, V., Yamamura,A. and Yokobayashi, Y. (2011) Engineering artificial small RNAs for conditional gene silencing in Escherichia coli. ACS Synth. Biol., 1, 6-13.
-
(2011)
ACS Synth. Biol.
, vol.1
, pp. 6-13
-
-
Sharma, V.1
Yamamura, A.2
Yokobayashi, Y.3
-
15
-
-
4944236203
-
MicC, a second small-RNA regulator of Omp protein expression in Escherichia coli
-
Chen, S., Zhang, A., Blyn, L.B. and Storz, G. (2004) MicC, a second small-RNA regulator of Omp protein expression in Escherichia coli. J. Bacteriol., 186, 6689-6697.
-
(2004)
J. Bacteriol.
, vol.186
, pp. 6689-6697
-
-
Chen, S.1
Zhang, A.2
Blyn, L.B.3
Storz, G.4
-
16
-
-
1542320707
-
Hfq, a new chaperoning role: Binding to messenger RNA determines access for small RNA regulator
-
Geissmann, T.A. and Touati, D. (2004) Hfq, a new chaperoning role: binding to messenger RNA determines access for small RNA regulator. EMBO J., 23, 396-405.
-
(2004)
EMBO J.
, vol.23
, pp. 396-405
-
-
Geissmann, T.A.1
Touati, D.2
-
17
-
-
83355177980
-
Competition among Hfq-binding small RNAs in Escherichia coli
-
Moon,K. and Gottesman, S. (2011) Competition among Hfq-binding small RNAs in Escherichia coli. Mol. Microbiol., 82, 1545-1562.
-
(2011)
Mol. Microbiol.
, vol.82
, pp. 1545-1562
-
-
Moon, K.1
Gottesman, S.2
-
18
-
-
35548995356
-
The RNA degradosome of Escherichia coli: An mRNA-degrading machine assembled on RNase e
-
Carpousis, A.J. (2007) The RNA degradosome of Escherichia coli: an mRNA-degrading machine assembled on RNase E. Annu. Rev. Microbiol., 61, 71-87.
-
(2007)
Annu. Rev. Microbiol.
, vol.61
, pp. 71-87
-
-
Carpousis, A.J.1
-
19
-
-
24944507588
-
RNase E-based ribonucleoprotein complexes: Mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAs
-
Morita, T., Maki,K. and Aiba, H. (2005) RNase E-based ribonucleoprotein complexes: mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAs. Genes Dev., 19, 2176-2186.
-
(2005)
Genes Dev.
, vol.19
, pp. 2176-2186
-
-
Morita, T.1
Maki, K.2
Aiba, H.3
-
20
-
-
79959937873
-
RNApredator: Fast accessibility-based prediction of sRNA targets
-
Eggenhofer, F., Tafer, H., Stadler, P.F. and Hofacker, I.L. (2011) RNApredator: fast accessibility-based prediction of sRNA targets. Nucleic Acids Res., 39, W149-W154.
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Eggenhofer, F.1
Tafer, H.2
Stadler, P.F.3
Hofacker, I.L.4
-
21
-
-
79959967431
-
PsRNATarget: A plant small RNA target analysis server
-
Dai,X. and Zhao, P.X. (2011) psRNATarget: a plant small RNA target analysis server. Nucleic Acids Res., 39, W155-W159.
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Dai, X.1
Zhao, P.X.2
-
22
-
-
79952786136
-
Accessibility and evolutionary conservation mark bacterial small-RNA target-binding regions
-
Peer,A. and Margalit, H. (2011) Accessibility and evolutionary conservation mark bacterial small-RNA target-binding regions. J. Bacteriol., 193, 1690-1701.
-
(2011)
J. Bacteriol.
, vol.193
, pp. 1690-1701
-
-
Peer, A.1
Margalit, H.2
-
23
-
-
79960433506
-
Hfq and its constellation of RNA
-
Vogel,J. and Luisi, B.F. (2011) Hfq and its constellation of RNA. Nat. Rev. Microbiol., 9, 578-589.
-
(2011)
Nat. Rev. Microbiol.
, vol.9
, pp. 578-589
-
-
Vogel, J.1
Luisi, B.F.2
-
24
-
-
77953090678
-
Positive regulation by small RNAs and the role of Hfq
-
Soper, T., Mandin, P., Majdalani, N., Gottesman,S. and Woodson, S.A. (2010) Positive regulation by small RNAs and the role of Hfq. Proc. Natl Acad. Sci. USA, 107, 9602-9607.
-
(2010)
Proc. Natl Acad. Sci. USA
, vol.107
, pp. 9602-9607
-
-
Soper, T.1
Mandin, P.2
Majdalani, N.3
Gottesman, S.4
Woodson, S.A.5
-
25
-
-
77951519861
-
A minimal base-pairing region of a bacterial small RNA SgrS required for translational repression of ptsG mRNA
-
Maki, K., Morita, T., Otaka,H. and Aiba, H. (2010) A minimal base-pairing region of a bacterial small RNA SgrS required for translational repression of ptsG mRNA. Mol. Microbiol., 76, 782-792.
-
(2010)
Mol. Microbiol.
, vol.76
, pp. 782-792
-
-
Maki, K.1
Morita, T.2
Otaka, H.3
Aiba, H.4
-
26
-
-
74549172000
-
SRNATarget: A web server for prediction of bacterial sRNA targets
-
Cao, Y., Zhao, Y., Cha, L., Ying, X., Wang, L., Shao,N. and Li, W. (2009) sRNATarget: a web server for prediction of bacterial sRNA targets. Bioinformation, 3, 364-366.
-
(2009)
Bioinformation
, vol.3
, pp. 364-366
-
-
Cao, Y.1
Zhao, Y.2
Cha, L.3
Ying, X.4
Wang, L.5
Shao, N.6
Li, W.7
-
27
-
-
48449101958
-
TargetRNA: A tool for predicting targets of small RNA action in bacteria
-
Tjaden, B. (2008) TargetRNA: a tool for predicting targets of small RNA action in bacteria. Nucleic Acids Res., 36, W109-W113.
-
(2008)
Nucleic Acids Res.
, vol.36
-
-
Tjaden, B.1
-
28
-
-
57249083988
-
IntaRNA: Efficient prediction of bacterial sRNA targets incorporating target site accessibility and seed regions
-
Busch, A., Richter, A.S. and Backofen, R. (2008) IntaRNA: efficient prediction of bacterial sRNA targets incorporating target site accessibility and seed regions. Bioinformatics, 24, 2849-2856.
-
(2008)
Bioinformatics
, vol.24
, pp. 2849-2856
-
-
Busch, A.1
Richter, A.S.2
Backofen, R.3
-
29
-
-
77957293076
-
Shine-Dalgarno sequence enhances the efficiency of lacZ repression by artificial anti-lac antisense RNAs in Escherichia coli
-
Stefan, A., Schwarz, F., Bressanin,D. and Hochkoeppler, A. (2010) Shine-Dalgarno sequence enhances the efficiency of lacZ repression by artificial anti-lac antisense RNAs in Escherichia coli. J. Biosci. Bioeng., 110, 523-528.
-
(2010)
J. Biosci. Bioeng.
, vol.110
, pp. 523-528
-
-
Stefan, A.1
Schwarz, F.2
Bressanin, D.3
Hochkoeppler, A.4
-
30
-
-
79955607368
-
Artificial trans-encoded small non-coding RNAs specifically silence the selected gene expression in bacteria
-
Man, S., Cheng, R., Miao, C., Gong, Q., Gu, Y., Lu, X., Han,F. and Yu, W. (2011) Artificial trans-encoded small non-coding RNAs specifically silence the selected gene expression in bacteria. Nucleic Acids Res., 39, e50.
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Man, S.1
Cheng, R.2
Miao, C.3
Gong, Q.4
Gu, Y.5
Lu, X.6
Han, F.7
Yu, W.8
-
31
-
-
55349129970
-
Repression of small toxic protein synthesis by the Sib and OhsC small RNAs
-
Fozo, E.M., Kawano, M., Fontaine, F., Kaya, Y., Mendieta, K.S., Jones, K.L., Ocampo, A., Rudd, K.E. and Storz, G. (2008) Repression of small toxic protein synthesis by the Sib and OhsC small RNAs. Mol. Microbiol., 70, 1076-1093.
-
(2008)
Mol. Microbiol.
, vol.70
, pp. 1076-1093
-
-
Fozo, E.M.1
Kawano, M.2
Fontaine, F.3
Kaya, Y.4
Mendieta, K.S.5
Jones, K.L.6
Ocampo, A.7
Rudd, K.E.8
Storz, G.9
-
32
-
-
77957221326
-
Recognition and discrimination of target mRNAs by Sib RNAs, a cis-encoded sRNA family
-
Han, K., Kim, K.S., Bak, G., Park,H. and Lee, Y. (2010) Recognition and discrimination of target mRNAs by Sib RNAs, a cis-encoded sRNA family. Nucleic Acids Res., 38, 5851-5866.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 5851-5866
-
-
Han, K.1
Kim, K.S.2
Bak, G.3
Park, H.4
Lee, Y.5
-
33
-
-
0035176037
-
Cold-temperature induction of Escherichia coli polynucleotide phosphorylase occurs by reversal of its autoregulation
-
Beran, R.K. and Simons, R.W. (2001) Cold-temperature induction of Escherichia coli polynucleotide phosphorylase occurs by reversal of its autoregulation. Mol. Microbiol., 39, 112-125.
-
(2001)
Mol. Microbiol.
, vol.39
, pp. 112-125
-
-
Beran, R.K.1
Simons, R.W.2
-
34
-
-
0028604471
-
Rapid confirmation of single copy lambda prophage integration by PCR
-
Powell, B.S., Rivas, M.P., Court, D.L., Nakamura,Y. and Turnbough, C.L. Jr (1994) Rapid confirmation of single copy lambda prophage integration by PCR. Nucleic Acids Res., 22, 5765-5766.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 5765-5766
-
-
Powell, B.S.1
Rivas, M.P.2
Court, D.L.3
Nakamura, Y.4
Turnbough Jr., C.L.5
-
35
-
-
0034705144
-
An efficient recombination system for chromosome engineering in Escherichia coli
-
Yu, D., Ellis, H.M., Lee, E.C., Jenkins, N.A., Copeland, N.G. and Court, D.L. (2000) An efficient recombination system for chromosome engineering in Escherichia coli. Proc. Natl Acad. Sci. USA, 97, 5978-5983.
-
(2000)
Proc. Natl Acad. Sci. USA
, vol.97
, pp. 5978-5983
-
-
Yu, D.1
Ellis, H.M.2
Lee, E.C.3
Jenkins, N.A.4
Copeland, N.G.5
Court, D.L.6
-
36
-
-
31544450286
-
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: The Keio collection
-
Baba, T., Ara, T., Hasegawa, M., Takai, Y., Okumura, Y., Baba, M., Datsenko, K.A., Tomita, M., Wanner, B.L. and Mori, H. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol., 2, 2006.0008.
-
(2006)
Mol. Syst. Biol.
, vol.2
, pp. 20060008
-
-
Baba, T.1
Ara, T.2
Hasegawa, M.3
Takai, Y.4
Okumura, Y.5
Baba, M.6
Datsenko, K.A.7
Tomita, M.8
Wanner, B.L.9
Mori, H.10
-
37
-
-
0029019484
-
Control of the Escherichia coli rrnB P1 promoter strength by ppGpp
-
Zhang,X. and Bremer, H. (1995) Control of the Escherichia coli rrnB P1 promoter strength by ppGpp. J. Biol. Chem., 270, 11181-11189.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 11181-11189
-
-
Zhang, X.1
Bremer, H.2
-
38
-
-
0029765533
-
Mutational analysis of RNA structures and sequences postulated to affect 30 processing of M1 RNA, the RNA component of Escherichia coli RNase P
-
Kim, S., Kim, H., Park,I. and Lee, Y. (1996) Mutational analysis of RNA structures and sequences postulated to affect 30 processing of M1 RNA, the RNA component of Escherichia coli RNase P. J. Biol. Chem., 271, 19330-19337.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 19330-19337
-
-
Kim, S.1
Kim, H.2
Park, I.3
Lee, Y.4
-
39
-
-
0024819449
-
Synthesis of small RNAs using T7 RNA polymerase
-
Milligan, J.F. and Uhlenbeck, O.C. (1989) Synthesis of small RNAs using T7 RNA polymerase. Methods Enzymol., 180, 51-62.
-
(1989)
Methods Enzymol.
, vol.180
, pp. 51-62
-
-
Milligan, J.F.1
Uhlenbeck, O.C.2
-
40
-
-
0142105383
-
Peripheral regions of natural hammerhead ribozymes greatly increase their self-cleavage activity
-
De la Pena, M., Gago,S. and Flores, R. (2003) Peripheral regions of natural hammerhead ribozymes greatly increase their self-cleavage activity. EMBO J., 22, 5561-5570.
-
(2003)
EMBO J.
, vol.22
, pp. 5561-5570
-
-
De La Pena, M.1
Gago, S.2
Flores, R.3
-
41
-
-
0027158347
-
A simple method for isolation of intact RNA from dried polyacrylamide gels
-
Morl,M. and Schmelzer, C. (1993) A simple method for isolation of intact RNA from dried polyacrylamide gels. Nucleic Acids Res., 21, 2016.
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 2016
-
-
Morl, M.1
Schmelzer, C.2
-
42
-
-
33646568438
-
Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): Unique resources for biological research
-
Kitagawa, M., Ara, T., Arifuzzaman, M., Ioka-Nakamichi, T., Inamoto, E., Toyonaga,H. and Mori, H. (2005) Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): unique resources for biological research. DNA Res., 12, 291-299.
-
(2005)
DNA Res.
, vol.12
, pp. 291-299
-
-
Kitagawa, M.1
Ara, T.2
Arifuzzaman, M.3
Ioka-Nakamichi, T.4
Inamoto, E.5
Toyonaga, H.6
Mori, H.7
-
43
-
-
78650925854
-
Rho-dependent termination of ssrS (6S RNA) transcription in Escherichia coli: Implication for 30 processing of 6S RNA and expression of downstream ygfA (putative 5-formyltetrahydrofolate cyclo-ligase)
-
Chae, H., Han, K., Kim, K.S., Park, H., Lee,J. and Lee, Y. (2011) Rho-dependent termination of ssrS (6S RNA) transcription in Escherichia coli: implication for 30 processing of 6S RNA and expression of downstream ygfA (putative 5-formyltetrahydrofolate cyclo-ligase). J. Biol. Chem., 286, 114-122.
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 114-122
-
-
Chae, H.1
Han, K.2
Kim, K.S.3
Park, H.4
Lee, J.5
Lee, Y.6
-
44
-
-
11344264898
-
Regulation of 6S RNA biogenesis by switching utilization of both sigma factors and endoribonucleases
-
Kim, K.S. and Lee, Y. (2004) Regulation of 6S RNA biogenesis by switching utilization of both sigma factors and endoribonucleases. Nucleic Acids Res., 32, 6057-6068.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 6057-6068
-
-
Kim, K.S.1
Lee, Y.2
-
45
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker, M. (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res., 31, 3406-3415.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
-
46
-
-
77954269050
-
Freiburg RNA tools: A web server integrating INTARNA, EXPARNA and LOCARNA
-
Smith, C., Heyne, S., Richter, A.S., Will,S. and Backofen, R. (2010) Freiburg RNA tools: a web server integrating INTARNA, EXPARNA and LOCARNA. Nucleic Acids Res., 38, W373-W377.
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Smith, C.1
Heyne, S.2
Richter, A.S.3
Will, S.4
Backofen, R.5
-
47
-
-
0141644746
-
Global analysis of small RNA and mRNA targets of Hfq
-
Zhang, A., Wassarman, K.M., Rosenow, C., Tjaden, B.C., Storz,G. and Gottesman, S. (2003) Global analysis of small RNA and mRNA targets of Hfq. Mol. Microbiol., 50, 1111-1124.
-
(2003)
Mol. Microbiol.
, vol.50
, pp. 1111-1124
-
-
Zhang, A.1
Wassarman, K.M.2
Rosenow, C.3
Tjaden, B.C.4
Storz, G.5
Gottesman, S.6
-
48
-
-
79958095433
-
Despite similar binding to the Hfq protein regulatory RNAs widely differ in their competition performance
-
Olejniczak, M. (2010) Despite similar binding to the Hfq protein regulatory RNAs widely differ in their competition performance. Biochemistry, 50, 4427-4440.
-
(2010)
Biochemistry
, vol.50
, pp. 4427-4440
-
-
Olejniczak, M.1
-
49
-
-
84865302975
-
Accessibility and conservation: General features of bacterial small RNA-mRNA interactions?
-
Richter, A.S. and Backofen, R. (2012) Accessibility and conservation: General features of bacterial small RNA-mRNA interactions? RNA Biol., 9, 954-965.
-
(2012)
RNA Biol.
, vol.9
, pp. 954-965
-
-
Richter, A.S.1
Backofen, R.2
-
50
-
-
79251559383
-
The base-pairing RNA spot 42 participates in a multioutput feedforward loop to help enact catabolite repression in Escherichia coli
-
Beisel, C.L. and Storz, G. (2011) The base-pairing RNA spot 42 participates in a multioutput feedforward loop to help enact catabolite repression in Escherichia coli. Mol. Cell, 41, 286-297.
-
(2011)
Mol. Cell
, vol.41
, pp. 286-297
-
-
Beisel, C.L.1
Storz, G.2
-
51
-
-
33748257975
-
Modulating the outer membrane with small RNAs
-
Guillier, M., Gottesman,S. and Storz, G. (2006) Modulating the outer membrane with small RNAs. Genes Dev., 20, 2338-2348.
-
(2006)
Genes Dev.
, vol.20
, pp. 2338-2348
-
-
Guillier, M.1
Gottesman, S.2
Storz, G.3
-
52
-
-
40349096762
-
The role of the small regulatory RNA GcvB in GcvB/mRNA posttranscriptional regulation of oppA and dppA in Escherichia coli
-
Pulvermacher, S.C., Stauffer, L.T. and Stauffer, G.V. (2008) The role of the small regulatory RNA GcvB in GcvB/mRNA posttranscriptional regulation of oppA and dppA in Escherichia coli. FEMS Microbiol. Lett., 281, 42-50.
-
(2008)
FEMS Microbiol. Lett.
, vol.281
, pp. 42-50
-
-
Pulvermacher, S.C.1
Stauffer, L.T.2
Stauffer, G.V.3
-
53
-
-
77958563236
-
An upstream Hfq binding site in the fhlA mRNA leader region facilitates the OxyS-fhlA interaction
-
Salim, N.N. and Feig, A.L. (2010) An upstream Hfq binding site in the fhlA mRNA leader region facilitates the OxyS-fhlA interaction. PLoS. One, 5, e13028.
-
(2010)
PLoS. One
, vol.5
-
-
Salim, N.N.1
Feig, A.L.2
-
54
-
-
33847363604
-
Spectroscopic observation of RNA chaperone activities of Hfq in post-transcriptional regulation by a small non-coding RNA
-
Arluison, V., Hohng, S., Roy, R., Pellegrini, O., Regnier,P. and Ha, T. (2007) Spectroscopic observation of RNA chaperone activities of Hfq in post-transcriptional regulation by a small non-coding RNA. Nucleic Acids Res., 35, 999-1006.
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 999-1006
-
-
Arluison, V.1
Hohng, S.2
Roy, R.3
Pellegrini, O.4
Regnier, P.5
Ha, T.6
-
55
-
-
70350699443
-
Effect of salt and RNA structure on annealing and strand displacement by Hfq
-
Hopkins, J.F., Panja, S., McNeil, S.A. and Woodson, S.A. (2009) Effect of salt and RNA structure on annealing and strand displacement by Hfq. Nucleic Acids Res., 37, 6205-6213.
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 6205-6213
-
-
Hopkins, J.F.1
Panja, S.2
McNeil, S.A.3
Woodson, S.A.4
-
56
-
-
84871788963
-
Study of E. coli Hfq's RNA annealing acceleration and duplex destabilization activities using substrates with different GC-contents
-
Doetsch, M., Stampfl, S., Furtig, B., Beich-Frandsen, M., Saxena, K., Lybecker,M. and Schroeder, R. (2013) Study of E. coli Hfq's RNA annealing acceleration and duplex destabilization activities using substrates with different GC-contents. Nucleic Acids Res., 41, 487-497.
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. 487-497
-
-
Doetsch, M.1
Stampfl, S.2
Furtig, B.3
Beich-Frandsen, M.4
Saxena, K.5
Lybecker, M.6
Schroeder, R.7
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