메뉴 건너뛰기




Volumn 9, Issue 3, 2013, Pages

Blood-Informative Transcripts Define Nine Common Axes of Peripheral Blood Gene Expression

Author keywords

[No Author keywords available]

Indexed keywords

TRANSCRIPTOME;

EID: 84875985398     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1003362     Document Type: Article
Times cited : (49)

References (28)
  • 1
    • 33750876203 scopus 로고    scopus 로고
    • Combining information from common type 2 diabetes risk polymorphisms improves disease prediction
    • doi:10.1371/journal.pmed.0030374
    • Weedon MN, et al. (2006) Combining information from common type 2 diabetes risk polymorphisms improves disease prediction. PLoS Med 3: e374 doi:10.1371/journal.pmed.0030374.
    • (2006) PLoS Med , vol.3
    • Weedon, M.N.1
  • 2
    • 77954827460 scopus 로고    scopus 로고
    • The path to personalized medicine
    • Hamburg MA, Collins FS, (2010) The path to personalized medicine. N Engl J Med 363: 301-304.
    • (2010) N Engl J Med , vol.363 , pp. 301-304
    • Hamburg, M.A.1    Collins, F.S.2
  • 3
    • 7444253428 scopus 로고    scopus 로고
    • Systems biology and new technologies enable predictive and preventative medicine
    • Hood L, Heath JR, Phelps ME, Lin B, (2004) Systems biology and new technologies enable predictive and preventative medicine. Science 306: 640-643.
    • (2004) Science , vol.306 , pp. 640-643
    • Hood, L.1    Heath, J.R.2    Phelps, M.E.3    Lin, B.4
  • 4
    • 77954763156 scopus 로고    scopus 로고
    • Genome-wide allele-specific analysis: insights into regulatory variation
    • Pastinen T, (2010) Genome-wide allele-specific analysis: insights into regulatory variation. Nat Rev Genet 11: 533-538.
    • (2010) Nat Rev Genet , vol.11 , pp. 533-538
    • Pastinen, T.1
  • 6
    • 45249095384 scopus 로고    scopus 로고
    • Mapping gene expression quantitative trait loci by singular value decomposition and independent component analysis
    • Biswas S, Storey JD, Akey JM, (2008) Mapping gene expression quantitative trait loci by singular value decomposition and independent component analysis. BMC Bioinf 9: 244.
    • (2008) BMC Bioinf , vol.9 , pp. 244
    • Biswas, S.1    Storey, J.D.2    Akey, J.M.3
  • 7
    • 33845903308 scopus 로고    scopus 로고
    • Inferential, robust non-negative matrix factorization analysis of microarray data
    • Fogel P, Young SS, Hawkins DM, Ledirac N, (2007) Inferential, robust non-negative matrix factorization analysis of microarray data. Bioinformatics 23: 44-49.
    • (2007) Bioinformatics , vol.23 , pp. 44-49
    • Fogel, P.1    Young, S.S.2    Hawkins, D.M.3    Ledirac, N.4
  • 8
    • 60549111634 scopus 로고    scopus 로고
    • WGCNA: an R package for weighted correlation network analysis
    • Langfelder P, Horvath S, (2008) WGCNA: an R package for weighted correlation network analysis. BMC Bioinf 9: 559.
    • (2008) BMC Bioinf , vol.9 , pp. 559
    • Langfelder, P.1    Horvath, S.2
  • 9
    • 67149122033 scopus 로고    scopus 로고
    • Modulated modularity clustering as an exploratory tool for functional genomic inference
    • doi:10.1371/journal.pgen.1000479
    • Stone EA, Ayroles JF, (2009) Modulated modularity clustering as an exploratory tool for functional genomic inference. PLoS Genet 5: e1000479 doi:10.1371/journal.pgen.1000479.
    • (2009) PLoS Genet , vol.5
    • Stone, E.A.1    Ayroles, J.F.2
  • 10
    • 79959262465 scopus 로고    scopus 로고
    • Transcriptomic analysis of autistic brain reveals convergent molecular pathology
    • Voineagu I, et al. (2011) Transcriptomic analysis of autistic brain reveals convergent molecular pathology. Nature 474: 380-384.
    • (2011) Nature , vol.474 , pp. 380-384
    • Voineagu, I.1
  • 11
    • 61349113311 scopus 로고    scopus 로고
    • Systems genetics of complex traits in Drosophila melanogaster
    • Ayroles JF, et al. (2009) Systems genetics of complex traits in Drosophila melanogaster. Nat Genet 41: 299-307.
    • (2009) Nat Genet , vol.41 , pp. 299-307
    • Ayroles, J.F.1
  • 12
    • 46749152178 scopus 로고    scopus 로고
    • A modular analysis framework for blood genomics studies: application to systemic lupus erythematosus
    • Chaussabel D, et al. (2008) A modular analysis framework for blood genomics studies: application to systemic lupus erythematosus. Immunity 29: 150-164.
    • (2008) Immunity , vol.29 , pp. 150-164
    • Chaussabel, D.1
  • 13
    • 73349126396 scopus 로고    scopus 로고
    • Geographical genomics of human leukocyte gene expression variation in southern Morocco
    • Idaghdour Y, et al. (2010) Geographical genomics of human leukocyte gene expression variation in southern Morocco. Nat Genet 42: 62-67.
    • (2010) Nat Genet , vol.42 , pp. 62-67
    • Idaghdour, Y.1
  • 14
    • 79251489458 scopus 로고    scopus 로고
    • Maternal influences on the transmission of leukocyte gene expression profiles in population samples from Brisbane, Australia
    • doi:10.1371/journal.pone.0014479
    • Mason E, et al. (2010) Maternal influences on the transmission of leukocyte gene expression profiles in population samples from Brisbane, Australia. PLoS ONE 5: e14479 doi:10.1371/journal.pone.0014479.
    • (2010) PLoS ONE , vol.5
    • Mason, E.1
  • 15
    • 77955894773 scopus 로고    scopus 로고
    • An interferon-inducible neutrophil-driven blood transcriptional signature in human tuberculosis
    • Berry MP, et al. (2010) An interferon-inducible neutrophil-driven blood transcriptional signature in human tuberculosis. Nature 466: 973-977.
    • (2010) Nature , vol.466 , pp. 973-977
    • Berry, M.P.1
  • 16
    • 63449105856 scopus 로고    scopus 로고
    • Complex nature of SNP genotype effects on gene expression in primary human leucocytes
    • Heap GA, et al. (2009) Complex nature of SNP genotype effects on gene expression in primary human leucocytes. BMC Med Genom 2: 1.
    • (2009) BMC Med Genom , vol.2 , pp. 1
    • Heap, G.A.1
  • 17
    • 78049420683 scopus 로고    scopus 로고
    • An immune response network associated with blood lipid levels
    • doi:10.1371/journal.pgen.1001113
    • Inouye M, et al. (2010) An immune response network associated with blood lipid levels. PLoS Genet 6: e1001113 doi:10.1371/journal.pgen.1001113.
    • (2010) PLoS Genet , vol.6
    • Inouye, M.1
  • 18
    • 84857856577 scopus 로고    scopus 로고
    • Genetic control of gene expression in whole blood and lymphoblastoid cell lines is largely independent
    • Powell JE, et al. (2012) Genetic control of gene expression in whole blood and lymphoblastoid cell lines is largely independent. Genome Res 22: 356-366.
    • (2012) Genome Res , vol.22 , pp. 356-366
    • Powell, J.E.1
  • 19
    • 67849130563 scopus 로고    scopus 로고
    • ToppGene Suite for gene list enrichment analysis and candidate gene prioritization
    • Chen J, Bardes EE, Aronow BJ, Jegga AG, (2009) ToppGene Suite for gene list enrichment analysis and candidate gene prioritization. Nucl Acids Res 37: W305-311.
    • (2009) Nucl Acids Res , vol.37
    • Chen, J.1    Bardes, E.E.2    Aronow, B.J.3    Jegga, A.G.4
  • 20
    • 84858433310 scopus 로고    scopus 로고
    • Personal omics profiling reveals dynamic molecular and medical phenotypes
    • Chen R, Mias GI, Li-Pook-Than J, Jiang L, Lam HYK, et al. (2012) Personal omics profiling reveals dynamic molecular and medical phenotypes. Cell 148: 1293-1307.
    • (2012) Cell , vol.148 , pp. 1293-1307
    • Chen, R.1    Mias, G.I.2    Li-Pook-Than, J.3    Jiang, L.4    Lam, H.Y.K.5
  • 21
    • 0035687554 scopus 로고    scopus 로고
    • Assessing gene significance from cDNA microarray expression data via mixed models
    • Wolfinger RD, et al. (2001) Assessing gene significance from cDNA microarray expression data via mixed models. J Comput Biol 8: 625-37.
    • (2001) J Comput Biol , vol.8 , pp. 625-637
    • Wolfinger, R.D.1
  • 22
    • 80052308980 scopus 로고    scopus 로고
    • Variance of gene expression identifies altered network constraints in neurological disease
    • doi:10.1371/journal.pgen.1002207
    • Mar JC, et al. (2011) Variance of gene expression identifies altered network constraints in neurological disease. PLoS Genet 7: e1002207 doi:10.1371/journal.pgen.1002207.
    • (2011) PLoS Genet , vol.7
    • Mar, J.C.1
  • 23
    • 77957913975 scopus 로고    scopus 로고
    • Cancer biomarker discovery: the entropic hallmark
    • doi:10.1371/journal.pone.0012262
    • Berretta R, Moscato P, (2010) Cancer biomarker discovery: the entropic hallmark. PLoS ONE 5: e12262 doi:10.1371/journal.pone.0012262.
    • (2010) PLoS ONE , vol.5
    • Berretta, R.1    Moscato, P.2
  • 24
    • 8844244726 scopus 로고    scopus 로고
    • Genetic inheritance of gene expression in human cell lines
    • Monks SA, et al. (2004) Genetic inheritance of gene expression in human cell lines. Am J Hum Genet 75: 1094-1105.
    • (2004) Am J Hum Genet , vol.75 , pp. 1094-1105
    • Monks, S.A.1
  • 25
    • 4043128071 scopus 로고    scopus 로고
    • Genetic analysis of genome-wide variation in human gene expression
    • Morley M, et al. (2004) Genetic analysis of genome-wide variation in human gene expression. Nature 430: 743-743.
    • (2004) Nature , vol.430 , pp. 743
    • Morley, M.1
  • 27
    • 84875999789 scopus 로고    scopus 로고
    • Effect of normalization on statistical and biological interpretation of gene fxpression profiles
    • Qin SP, Kim J, Arafat D, Gibson G, (2012) Effect of normalization on statistical and biological interpretation of gene fxpression profiles. Front Genet 3: 160.
    • (2012) Front Genet , vol.3 , pp. 160
    • Qin, S.P.1    Kim, J.2    Arafat, D.3    Gibson, G.4
  • 28
    • 84876007294 scopus 로고    scopus 로고
    • Using blood informative transcripts in geographical genomics: impact of lifestyle on gene expression in Fijians
    • Nath A, Arafat D, Gibson G, (2012) Using blood informative transcripts in geographical genomics: impact of lifestyle on gene expression in Fijians. Front Genet 3: 243.
    • (2012) Front Genet , vol.3 , pp. 243
    • Nath, A.1    Arafat, D.2    Gibson, G.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.