Role of N-acetylserotonin O-methyltransferase in bipolar disorders and its dynamics

Journal of Molecular Liquids

Volumn 182, Issue , 2013, Pages 25-31

  Azam, S Sikander ^a   Saroosh, Ayman ^a   Zaman, Naila ^a   Raza, Saad ^a  

^a QUAID I AZAM UNIVERSITY   (Pakistan)

Author keywords

Bipolar disorder; Glycoproteins; Homology modeling; Molecular dynamics; N Acetylserotonin O methyltransferase; Water box

Indexed keywords

BIPOLAR DISORDER; COMPARATIVE MODELING; COMPUTATIONAL TOOLS; HOMOLOGY MODELING; O-METHYLTRANSFERASE; PHARMACOLOGICAL PROPERTIES; ROOT MEAN SQUARE DEVIATIONS; STRUCTURAL COMPLEXITY;

GLYCOPROTEINS; MOLECULAR DYNAMICS;

PROTEINS;

EID: 84875924607     PISSN: 01677322     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.molliq.2013.03.008     Document Type: Article

References (44)

1. M. Bernard, S.J. Donohue, and D.C. Klein Brain Research 696 1995 37 48
2. I.R. Rodriguez, K. Mazuruk, T.J. Schoen, and G.J. Chader The Journal of Biological Chemistry 269 1994 31969 31977
3. K. Ried, E. Rao, K. Schiebel, and G.A. Rappold Human Molecular Genetics 7 1998 1771 1778
4. X. Cheng Current Opinion in Structural Biology 5 1995 4 10
5. M. Kanehisa, S. Goto, M. Hattori, K.F. Aoki-Kinoshita, M. Itoh, S. Kawashima, T. Katayama, M. Araki, and M. Hirakawa Nucleic Acids Research 34 2006 D354 D357
6. R. Caspi, H. Foerster, C.A. Fulcher, R. Hopkinson, J. Ingraham, P. Kaipa, M. Krummenacker, S. Paley, J. Pick, S.Y. Rhee, C. Tissier, P. Zhang, and P.D. Karp Nucleic Acids Research 34 2006 D511 D516
7. N. Maltsev, E. Glass, D. Sulakhe, A. Rodriguez, M.H. Syed, T. Bompada, Y. Zhang, and M. D'Souza Nucleic Acids Research 34 2006 D369 D372
8. D. Pozo, S. Garcia-Maurino, J.M. Guerrero, and J.R. Calvo Journal of Pineal Research 37 2004 48 54
9. T. Fukuda, N. Akiyama, M. Ikegami, H. Takahashi, A. Sasaki, H. Oka, T. Komori, Y. Tanaka, Y. Nakazato, J. Akimoto, M. Tanaka, Y. Okada, and S. Saito Journal of Neuropathology and Experimental Neurology 69 2010 498 510
10. V. Srinivasan, D. De Berardis, S.D. Shillcutt, and A. Brzezinski Expert Opinion on Investigational Drugs 21 2012 1503 1522
11. J. Melke, H.G. Botros, P. Chaste, C. Betancur, G. Nygren, H. Anckarsäter, M. Rastam, O. Ståhlberg, I.C. Gillberg, and R. Delorme Molecular Psychiatry 13 2008 90 98
12. Y. Djeridane, B. Pitrosky, B. Vivien-Roels, V. Simonneaux, R. Kirsch, and P. Pevet Journal of Pineal Research 29 2000 65 73
13. Y. Djeridane, and Y. Touitou Psychopharmacology 154 2001 403 407
14. R.J. Reiter, D.X. Tan, M.P. Terron, L.J. Flores, and Z. Czarnocki Acta Biochimica Polonica 54 2007 1 9
15. C. Chothia, and A.M. Lesk The EMBO Journal 5 1986 823 826
16. A. Kryshtafovych, K. Fidelis, and A. Tramontano Proteins: Structure, Function, and Bioinformatics 76 2011 91 106
17. A. Elofsson Proteins 46 2002 330 339
18. M.A. Marti-Renom, M.S. Madhusudhan, N. Eswar, U. Pieper, M.-y. Shen, A. Sali, A. Fiser, N. Mirkovic, B. John, and A. Stuart Current Protocols in Bioinformatics 2003 John Wiley & Sons, Inc.
19. B. Rost Protein Engineering 12 1999 85 94
20. S. Kaczanowski, and P. Zielenkiewicz Theoretical Chemistry Accounts: Theory, Computation, and Modeling (Theoretica Chimica Acta) 125 2010 643 650
21. S.S. Azam, R. Uddin, and A. Wadood Journal of Molecular Liquids 174 2012 58 62
22. C. Notredame, D.G. Higgins, and J. Heringa Journal of Molecular Biology 302 2000 205 218
23. Y. Zhang, and J. Skolnick Nucleic Acids Research 33 2005 2302 2309
24. M. Larkin, G. Blackshields, N. Brown, R. Chenna, P. McGettigan, H. McWilliam, F. Valentin, I. Wallace, A. Wilm, and R. Lopez Bioinformatics 23 2007 2947 2948
25. A. Sali, and T.L. Blundell Journal of Molecular Biology 234 1993 779 815
26. F. Kiefer, K. Arnold, M. Künzli, L. Bordoli, and T. Schwede Nucleic Acids Research 37 2009 D387 D392
27. A. Roy, A. Kucukural, and Y. Zhang Nature Protocols 5 2010 725 738
28. N. Eswar, B. John, N. Mirkovic, A. Fiser, V.A. Ilyin, U. Pieper, A.C. Stuart, M.A. Marti-Renom, M.S. Madhusudhan, and B. Yerkovich Nucleic Acids Research 31 2003 3375 3380
29. P.A. Bates, L.A. Kelley, R.M. MacCallum, and M.J.E. Sternberg Proteins: Structure, Function, and Bioinformatics 45 2002 39 46
30. C. Lambert, N. Léonard, X. De Bolle, and E. Depiereux Bioinformatics 18 2002 1250 1256
31. W. Humphrey, A. Dalke, and K. Schulten Journal of Molecular Graphics 14 1996 33 38
32. R.A. Laskowski, M.W. MacArthur, D.S. Moss, and J.M. Thornton Journal of Applied Crystallography 26 1993 283 291
33. D. Eisenberg, R. Luthy, and J.U. Bowie Methods in Enzymology 277 1997 396 404
34. C. Colovos, and T.O. Yeates Protein Science: A Publication of the Protein Society 2 1993 1511 1519
35. M. Wiederstein, and M.J. Sippl Nucleic Acids Research 35 2007 W407 W410
36. R.A. Laskowski Nucleic Acids Research 37 2009 D355 D359
37. E.F. Pettersen, T.D. Goddard, C.C. Huang, G.S. Couch, D.M. Greenblatt, E.C. Meng, and T.E. Ferrin Journal of Computational Chemistry 25 2004 1605 1612
38. J. Wang, R.M. Wolf, J.W. Caldwell, P.A. Kollman, and D.A. Case Journal of Computational Chemistry 25 2004 1157 1174
39. M. Hendlich, F. Rippmann, and G. Barnickel Journal of Molecular Graphics & Modelling 15 1997 359 363 (389)
40. D.A. Case, T.A. Darden, T.E. Cheatham III, C.L. Simmerling, J. Wang, R.E. Duke, R. Luo, M. Crowley, R.C. Walker, W. Zhang, K.M. Merz, B. Wang, S. Hayik, A. Roitberg, G. Seabra, I. Kolossváry, K.F. Wong, F. Paesani, J. Vanicek, X. Wu, S.R. Brozell, T. Steinbrecher, H. Gohlke, L. Yang, C. Tan, J. Mongan, V. Hornak, G. Cui, D.H. Mathews, M.G. Seetin, C. Sagui, V. Babin, and P.A. Kollman 10 2008
41. J.P. Ryckaert, G. Ciccotti, and H.J.C. Berendsen Journal of Computational Physics 23 1977 327 341
42. H.J.C. Berendsen, J.P.M. Postma, W.F. van Gunsteren, A. DiNola, and J.R. Haak The Journal of Chemical Physics 81 1984 3684 3690
43. M.A. Marti-Renom, A.C. Stuart, A. Fiser, R. Sanchez, F. Melo, and A. Sali Annual Review of Biophysics and Biomolecular Structure 29 2000 291 325
44. R. Sanchez, and A. Sali Proteins Suppl. 1 1997 50 58