Completion of molecular characterization of Toscana phlebovirus genome: Nucleotide sequence, coding strategy of M genomic segment and its amino acid sequence comparison to other phleboviruses

Virus Research

Volumn 51, Issue 1, 1997, Pages 81-91

  Gro M C ^a   Di Bonito, P ^a   Fortini, D ^a   Mochi, S ^a   Giorgi, C ^a  

^a ISTITUTO SUPERIORE DI SANITÀ   (Italy)

Author keywords

Genome transcription; M segment; Phlebovirus; TOS virus; Viral glycoproteins

Indexed keywords

VIRUS GLYCOPROTEIN;

AMINO ACID SEQUENCE; ARTICLE; BUNYAVIRUS; CONTROLLED STUDY; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; VIRUS GENOME; VIRUS STRAIN;

AMINO ACID SEQUENCE; BASE SEQUENCE; CLONING, MOLECULAR; GENOME, VIRAL; MOLECULAR SEQUENCE DATA; OPEN READING FRAMES; PHLEBOVIRUS; PROTEINS; RNA, MESSENGER; RNA, VIRAL; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, RNA; SEQUENCE HOMOLOGY, AMINO ACID; TRANSCRIPTION, GENETIC; VIRAL MATRIX PROTEINS;

ORTHOBUNYAVIRUS; PHLEBOVIRUS; TOSCANA VIRUS; UUKUNIEMI VIRUS;

EID: 0031239714     PISSN: 01681702     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0168-1702(97)00076-2     Document Type: Article

References (42)

1. Accardi, L., Grò, M.C., Di Bonito, P., Giorgi, C., 1993. Toscana virus L segment: molecular cloning, coding strategy and amino acid sequence in comparison with other negative strand RNA viruses. Virus Res. 27, 119-131.
2. Andersson, A.M., Melin, L., Bean, A., Pettersson, R.F., 1997. A retention signal necessary and sufficient for Golgi localization maps to the cytoplasmic tail of a Bunyaviridae (Uukuniemi virus) membrane glycoprotein. J. Virol. 71, 4717-4727.
3. Bairoch, A., 1993. The PROSITE dictionary of sites and patterns in proteins, its current status. Nucleic Acids Res. 21, 3097-3103.
4. Bishop, D.H.L., Gay, M.E., Matsuoka, Y., 1983. Non-viral heterogeneous sequences are present at the 5′ ends of one species of snowshoe hare bunyavirus S complementary RNA. Nucleic Acid Res. 11, 6409-6418.
5. Bouloy, M., Pardigon, N., Vialat, P., Gerbaud, S., Girard, M., 1990. Characterization of the 5′ and 3′ end of viral messenger RNAs isolated from BHK 21 cells infected with Germiston virus (Bunyavirus). Virology 175, 50-58.
6. Chen, S.-Y., Compans, R., 1991. Oligomerization, transport, and Golgi retention of Punta Toro virus glycoprotein. J. Virol. 65, 5902-5909.
7. 1 protein. Virology 183, 351.
8. Collett, M.S., Purchio, A.F., Keegan, K., Frazier, S., Hays, W., Anderson, D.K., Parker, M.D., Schmaljohn, C., Schmidt, J., Dalrymple, J.M., 1985. Complete neucleotide sequence of the M RNA segment of Rift Valley fever virus. Virology 144, 228-245.
9. Collett, M.S., 1986. Messenger RNA of the M segment RNA of Rift Valley fever virus. Virology 151, 151-156.
10. Di Bonito, P., Mochi, S., Grè, M.C., Fortini, D., Giorgi, C., 1997. Organization of the M genomic segment of Toscana phlebovirus. J. Gen. Virol. 78, 77-81.
11. Elliott, R.M., Schmaljohn, C.S., Collet, M.S., 1991. Bunyaviridae genome structure and gene expression. Curr. Top. Microbiol. 169, 91-141.
12. Engelman, D.M., Steitz, T.A., Goldman, A., 1986. Identifying non-polar transbilayer helices in amino acid sequences of membrane proteins. Annu. Rev. Biophys. Biophys. Chem. 15, 321-353.
13. Eshita, Y., Ericson, B., Romanowski, V., Bishop., D.H.L., 1985. Analysis of the mRNA transcription process of Snowshoe hare Bunyavirus S and mRNA species. J. Virol. 55, 681-689.
14. Giorgi, C., Accardi, L., Nicoletti, L., Grò, M.C., Takehara, K., Hilditch, C., Morikawa, S., Bishop, D.H.L., 1991. Sequences and coding strategies of the S RNAs of Toscana and Rift Valley fever viruses compared to those of Punta Toro, Sicilian Sandfly fever, and Uukuniemi viruses. Virology 180, 733-753.
15. Grò, M.C., Di Bonito, P., Accardi, L., Giorgi, C., 1992. Analysis of 3′ and 5′ ends of N and NSs messenger RNAs of Toscana Phlebovirus. Virology 191, 435-438.
16. Hutchinson, K.L., Peters, C.J., Nichol, S.T., 1996. Sin Nombre Virus mRNA synthesis. Virology 224, 139-149.
17. Ihara, T., Smith, J., Dalrymple, J.M., Bishop, D.H.L., 1985. Complete sequences of the glycoprotein and M RNA of Punta Toro phlebovirus compared to those of Rift Valley fever virus. Virology 144, 246-259.
18. Ihara, T., Matsuura, Y., Bishop, D.H.L., 1985a. Analyses of the mRNA transcription processes of Punta Toro phlebovirus (Bunyaviridae). Virology 147, 317-325.
19. Jackson, R.M., Nilsson, T., Peterson, P.A., 1990. Identification of a consensus motif for retention of transmembrane proteins in the endoplasmatic reticulum. EMBO J. 9, 3153-3162.
20. Jin, H., Elliott, R.M., 1993. Characterization of Bunyamvera virus S RNA that is transcribed and replicated by the L protein expressed from recombinant vaccinia virus. J. Gen. Virol. 67, 1396-1404.
21. Kakach, L.T., Suzich, J.A., Collett, M.S., 1989. Rift Valley fever virus M segment: phlebovirus expression strategy and protein glycosylation. Virology 170, 505-510.
22. Kozak, M., 1984. Compilation and analysis of sequences upstream from the translation start site in eukaryotic mR-NAs. Nucleic Acid Res. 12, 857-872.
23. Kyte, J., Doolittle, R.F., 1982. A simple method for displaying the hydrophatic character of a protein. J. Mol. Biol. 157, 105-132.
24. Lopez, N., Muller, R., Prehaud, C., Bouloy, M., 1995. The L protein of Rift Valley Fever Virus can rescue viral ribonucleoproteins and transcribe syntetic genome-like RNA molecules. J. Virol. 69, 3972-3979.
25. Maizel, J.V., Lenk, R.P., 1981. Enhanced graphic matrix analysis of nucleic acid and protein sequences. Proc. Natl. Acad. Sci. USA 78, 7665-7669.
26. Matsuoka, Y., Ihara, T., Bishop, D.H.L., Compans, R.W., 1988. Intracellular accumulation of Punta Toro virus glycoproteins expressed from cloned cDNA. Virology 167, 251-260.
27. Matsuoka, Y., Chen, S.Y., Compans, R.W., 1994. A signal for Golgi retention in bunyavirus G1 Glycoproteins. J. Biol. Chem. 269, 22565-22573.
28. Marriott, A.C., Ward, V.K., Nuttall, P.A., 1989. The S RNA segment of sandfly fever Sicilian virus: evidence for an ambisense genome. Virology 169, 341-345.
29. Melin, L., Persson, R., Andersson, A., Bergstrom, A., Rönnholm, R., Pettersson, R.F., 1995. The membrane glycoprotein G1 of Uukuniemi virus contain a signal for localization to the Golgi complex. Virus Res. 36, 49-66.
30. Murphy, F.A., Harrison, A.K., Whitfield, S.G., 1973. Bunyaviridae: morphologic and morphogenetic similarities of bunyamvera serologic serogroup viruses and several other arthropod borne viruses. Intervirology 1, 297-316.
31. Nicoletti, L., Verani, P., Caciolli, S., Ciufolini, M.G.. Renzi, A., Bartolozzi, D., Paci, P., Leoncini, F., Padovani, P., Traini, E., Baldereschi, M., Balducci, M., 1991. Central nervous system involvement during infections by Phlebovirus Toscana of residents in natural foci in Central Italy (1977-1988). Am. J. Trop. Med. Hyg. 45, 429-434.
32. Patterson, J.L., Kolakofsky, D., 1984. Characterization of La Crosse virus small genome transripts. J. Virol. 49, 680-685.
33. Persson, R., Pettersson, R.F., 1991. Formation and intracellular transport of a heterodimeric viral spike protein complex. J. Cell Biol. 112, 257-265.
34. 2. Virology 160, 191-202.
35. Sanger, F., Nicklen, S., Coulson, A.R., 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74, 5463-5467.
36. Schmaljohn, C.S. Bunyaviridae: the viruses and their replication. In: Fields, B.N., Knipe, D.M., Howley, P.M. (Eds.) Virology, Lippincott Raven Publishers Philadelphia, 1447-1471 (1996).
37. Simons, J.F., Pettersson, R.F., 1991. Host-derived 5′ ends and overlapping complementary 3′ ends of the two mRNAs transcribed from the ambisense S segment of Uukuniemi virus. J. Virol. 65, 4741-4748.
38. Smith, J.F., Pifat, D.Y., 1982. Morphogenesis of sandfly fever virus (Bunyaviridae family). Virology 121, 61-81.
39. Smith, T.F., Waterman, M.S., 1981. Identification of common molecular subsequences. J. Mol. Biol. 147, 195-197.
40. Suzich, J.A., Collett, M.S., 1988. Rift Valley virus M segment: cell free transcription and translation of virus-complementary RNA. Virology 164, 478-486.
41. Suzich, J.A., Kakach, L.T., Collett, M.S., 1990. Expression strategy of a phlebovirus: biogenesis of proteins from the Rift Valley fever virus M segment. J. Virol. 64, 1549-1555.
42. Verani, P., Nicoletti, L., Ciufolini, M.G., 1984. Antigenic and biological characterization of Toscana virus, a new Phlebotomus fever group virus isolated in Italy. Acta. Virol. 28, 39-47.