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Volumn 10, Issue 1, 2013, Pages

Quantitative shape analysis with weighted covariance estimates for increased statistical efficiency

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EID: 84875546782     PISSN: None     EISSN: 17429994     Source Type: Journal    
DOI: 10.1186/1742-9994-10-16     Document Type: Article
Times cited : (3)

References (53)
  • 1
    • 1242321708 scopus 로고    scopus 로고
    • Geometric morphometrics: ten years of progress following the 'revolution'
    • Adams DC, Rohlf FJ, Slice DE. Geometric morphometrics: ten years of progress following the 'revolution'. Ital J. Zool 2004, 71:5-16.
    • (2004) Ital J. Zool , vol.71 , pp. 5-16
    • Adams, D.C.1    Rohlf, F.J.2    Slice, D.E.3
  • 2
    • 77955922325 scopus 로고    scopus 로고
    • Evolution and development of shape: integrating quantitative approaches
    • Klingenberg CP. Evolution and development of shape: integrating quantitative approaches. Nat Rev Gen 2010, 11:623-635.
    • (2010) Nat Rev Gen , vol.11 , pp. 623-635
    • Klingenberg, C.P.1
  • 3
    • 69449097227 scopus 로고    scopus 로고
    • Advances in geometric morphometrics
    • Mitteroecker P, Gunz P. Advances in geometric morphometrics. Evol Biol 2009, 36(2):235-247.
    • (2009) Evol Biol , vol.36 , Issue.2 , pp. 235-247
    • Mitteroecker, P.1    Gunz, P.2
  • 4
    • 77951652313 scopus 로고    scopus 로고
    • The use of geometric morphometrics in understanding shape variability of sclerotized haptoral structures of monogeneans (Platyhelminthes) with insights into biogeographic variability
    • 10.1016/j.parint.2010.01.006, 20129065
    • Vignon M, Sasal P. The use of geometric morphometrics in understanding shape variability of sclerotized haptoral structures of monogeneans (Platyhelminthes) with insights into biogeographic variability. Parasitol Int 2010, 59(2):183-191. 10.1016/j.parint.2010.01.006, 20129065.
    • (2010) Parasitol Int , vol.59 , Issue.2 , pp. 183-191
    • Vignon, M.1    Sasal, P.2
  • 5
    • 0021181136 scopus 로고
    • Tensor biometrics for changes in cranial shape
    • Bookstein FL. Tensor biometrics for changes in cranial shape. Ann Human Biol 1984, 11:413-437.
    • (1984) Ann Human Biol , vol.11 , pp. 413-437
    • Bookstein, F.L.1
  • 7
    • 0002432238 scopus 로고
    • Shape-manifolds, procrustean metrics, and complex projective spaces.
    • Kendall DG. Shape-manifolds, procrustean metrics, and complex projective spaces. Bull London Math Soc 1984, 16(2):81-121.
    • (1984) Bull London Math Soc , vol.16 , Issue.2 , pp. 81-121
    • Kendall, D.G.1
  • 8
    • 84972512610 scopus 로고
    • Size and shape spaces for landmark data in two dimensions
    • Bookstein FL. Size and shape spaces for landmark data in two dimensions. Stat Sci 1986, 1:181-242.
    • (1986) Stat Sci , vol.1 , pp. 181-242
    • Bookstein, F.L.1
  • 9
    • 0014054519 scopus 로고
    • The detection of disease clustering and a generalized regression approach
    • Mantel NA. The detection of disease clustering and a generalized regression approach. Cancer Res 1967, 27:209-220.
    • (1967) Cancer Res , vol.27 , pp. 209-220
    • Mantel, N.A.1
  • 10
    • 0034782527 scopus 로고    scopus 로고
    • How well do multivariate data sets match?The advantages of a procrustean superimposition approach over the mantel test
    • Peres-Neto PR, Jackson DA. How well do multivariate data sets match?The advantages of a procrustean superimposition approach over the mantel test. Oecologia 2001, 129:169-178.
    • (2001) Oecologia , vol.129 , pp. 169-178
    • Peres-Neto, P.R.1    Jackson, D.A.2
  • 11
    • 13444287831 scopus 로고    scopus 로고
    • ROBPCA: A new approach to robust principal component analysis
    • Hubert M, Rousseeuw PJ, Branden K. ROBPCA: A new approach to robust principal component analysis. Technometrics 2005, 47:64-79.
    • (2005) Technometrics , vol.47 , pp. 64-79
    • Hubert, M.1    Rousseeuw, P.J.2    Branden, K.3
  • 13
    • 0031107378 scopus 로고    scopus 로고
    • Landmark methods for forms without landmarks: morphometrics of group differences in outline shape
    • Bookstein FL. Landmark methods for forms without landmarks: morphometrics of group differences in outline shape. Med Image Anal 1997, 1(2):225-243.
    • (1997) Med Image Anal , vol.1 , Issue.2 , pp. 225-243
    • Bookstein, F.L.1
  • 14
    • 0032173355 scopus 로고    scopus 로고
    • Predicting error in rigid-body point-based registration
    • 10.1109/42.736021, 9874293
    • Fitzpatrick JM, West JB, Maurer CR. Predicting error in rigid-body point-based registration. IEEE Trans Med Imaging 1998, 17(5):694-702. 10.1109/42.736021, 9874293.
    • (1998) IEEE Trans Med Imaging , vol.17 , Issue.5 , pp. 694-702
    • Fitzpatrick, J.M.1    West, J.B.2    Maurer, C.R.3
  • 15
    • 0042904903 scopus 로고    scopus 로고
    • A new point matching algorithm for non-rigid registration
    • Chui H, Rangarajan A. A new point matching algorithm for non-rigid registration. Comput Vision Image Underst 2003, 89(2-3):114-141.
    • (2003) Comput Vision Image Underst , vol.89 , Issue.2-3 , pp. 114-141
    • Chui, H.1    Rangarajan, A.2
  • 16
    • 84860428591 scopus 로고
    • Extensions of the procrustes method for the optimal superimposition of landmarks
    • Rohlf FJ, Slice DE. Extensions of the procrustes method for the optimal superimposition of landmarks. Syst Zool 1990, 39:40-59.
    • (1990) Syst Zool , vol.39 , pp. 40-59
    • Rohlf, F.J.1    Slice, D.E.2
  • 17
    • 0034351390 scopus 로고    scopus 로고
    • Ability of geometric morphometric methods to estimate a known covariance matrix
    • 10.1080/106351500750049770, 12116434
    • Walker JA. Ability of geometric morphometric methods to estimate a known covariance matrix. Syst Biol 2000, 49(4):686-696. 10.1080/106351500750049770, 12116434.
    • (2000) Syst Biol , vol.49 , Issue.4 , pp. 686-696
    • Walker, J.A.1
  • 19
    • 0037659650 scopus 로고    scopus 로고
    • Bias and error in estimates of mean shape in geometric morphometrics
    • Rohlf FJ. Bias and error in estimates of mean shape in geometric morphometrics. J Human Evol 2003, 44:665-683.
    • (2003) J Human Evol , vol.44 , pp. 665-683
    • Rohlf, F.J.1
  • 20
    • 0027427057 scopus 로고
    • Euclidean distance matrix analysis (EDMA): estimation of mean form and mean form difference
    • Lele S. Euclidean distance matrix analysis (EDMA): estimation of mean form and mean form difference. Math Geol 1993, 25(5):573-602.
    • (1993) Math Geol , vol.25 , Issue.5 , pp. 573-602
    • Lele, S.1
  • 21
    • 84857433906 scopus 로고    scopus 로고
    • FGF/FGFR signaling coordinates skull development by modulating magnitude of morphological integration: evidence from Apert syndrome mouse models
    • Martinez-Abadias N, Heuze Y, Wang Y, Jabs EW, Aldridge K, Richtsmeier JT. FGF/FGFR signaling coordinates skull development by modulating magnitude of morphological integration: evidence from Apert syndrome mouse models. PLoS One 2011, 6(10):1-9.
    • (2011) PLoS One , vol.6 , Issue.10 , pp. 1-9
    • Martinez-Abadias, N.1    Heuze, Y.2    Wang, Y.3    Jabs, E.W.4    Aldridge, K.5    Richtsmeier, J.T.6
  • 23
    • 0000142472 scopus 로고
    • Procrustes methods in the statistical analysis of shape
    • Goodall CR. Procrustes methods in the statistical analysis of shape. J R Stat Soc, Ser B (Methodological) 1991, 53(2):285-339.
    • (1991) J R Stat Soc, Ser B (Methodological) , vol.53 , Issue.2 , pp. 285-339
    • Goodall, C.R.1
  • 24
    • 0002505663 scopus 로고
    • Statistical models in morphometric: are they realistic?
    • Lele S, Richtsmeier JT. Statistical models in morphometric: are they realistic?. Syst Zool 1990, 39:60-69.
    • (1990) Syst Zool , vol.39 , pp. 60-69
    • Lele, S.1    Richtsmeier, J.T.2
  • 25
    • 33748683496 scopus 로고    scopus 로고
    • Empirical bayes hierarchical models for regularizing maximum likelihood estimation in the matrix gaussian procrustes problem
    • 10.1073/pnas.0508445103, 1664551, 17130458
    • Theobald DL, Wuttke DS. Empirical bayes hierarchical models for regularizing maximum likelihood estimation in the matrix gaussian procrustes problem. Proc Natl Acad Sci USA 2006, 103(49):18521-18527. 10.1073/pnas.0508445103, 1664551, 17130458.
    • (2006) Proc Natl Acad Sci USA , vol.103 , Issue.49 , pp. 18521-18527
    • Theobald, D.L.1    Wuttke, D.S.2
  • 27
    • 84898488890 scopus 로고    scopus 로고
    • Morphometric shape analysis with measurement covariance estimates
    • Dundee, UK, Ragheb H
    • Ragheb H Morphometric shape analysis with measurement covariance estimates. Proc. British Machine Vision Conference. 2011, Dundee, UK, Ragheb H.
    • (2011) Proc. British Machine Vision Conference.
  • 29
    • 67149091097 scopus 로고    scopus 로고
    • Iterative solution for rigid-body point-based registration with anisotropic weighting
    • 72613D-1-72613D-10, Balachandran R
    • Balachandran R Iterative solution for rigid-body point-based registration with anisotropic weighting. Proc. of SPIE (Medical Imaging), vol. 7261. 2009, 72613D-1-72613D-10. Balachandran R.
    • (2009) Proc. of SPIE (Medical Imaging), , vol.7261
  • 30
    • 85041817635 scopus 로고    scopus 로고
    • A generalized factored stochastic model for the optimal global registration of LIDAR range images
    • Beinat A, Crosilla F. A generalized factored stochastic model for the optimal global registration of LIDAR range images. Proc. of IAPRS, Vol. 34. 2002, 36-39.
    • (2002) Proc. of IAPRS , vol.34 , pp. 36-39
    • Beinat, A.1    Crosilla, F.2
  • 32
    • 77953963070 scopus 로고    scopus 로고
    • Comparing principal and independent modes of variation in 3D human torso shape using PCA and ICA
    • Liverpool, UK
    • Ruto A, Lee M, Buxton B. Comparing principal and independent modes of variation in 3D human torso shape using PCA and ICA. ICA Research Network International Workshop 2006, 1-4. Liverpool, UK.
    • (2006) ICA Research Network International Workshop , pp. 1-4
    • Ruto, A.1    Lee, M.2    Buxton, B.3
  • 34
    • 79952312407 scopus 로고    scopus 로고
    • Linear discrimination, ordination, and the visualization of selection gradients in Modern Morphometrics
    • Mitteroecker P, Bukstein F. Linear discrimination, ordination, and the visualization of selection gradients in Modern Morphometrics. Evol Biol 2011, 38:100-114.
    • (2011) Evol Biol , vol.38 , pp. 100-114
    • Mitteroecker, P.1    Bukstein, F.2
  • 35
    • 0037028849 scopus 로고    scopus 로고
    • Iterative procrustes alignment with the EM algorithm
    • Luo B, Hancock ER. Iterative procrustes alignment with the EM algorithm. Image Vision Comput 2002, 20(5):377-396.
    • (2002) Image Vision Comput , vol.20 , Issue.5 , pp. 377-396
    • Luo, B.1    Hancock, E.R.2
  • 37
    • 69549116333 scopus 로고    scopus 로고
    • Novelty and " homology-free" Morphometrics: What's in a name?
    • Klingenberg CP
    • Klingenberg CP Novelty and " homology-free" Morphometrics: What's in a name?. Evol Biol 2008, 35(3):186-190. Klingenberg CP.
    • (2008) Evol Biol , vol.35 , Issue.3 , pp. 186-190
  • 38
    • 62749178796 scopus 로고    scopus 로고
    • Developmental dynamics and G-Matrices: Can morphometric spaces be used to model phenotypic evolution?
    • Polly PD
    • Polly PD Developmental dynamics and G-Matrices: Can morphometric spaces be used to model phenotypic evolution?. Evol Biol 2008, 35(2):83-96. Polly PD.
    • (2008) Evol Biol , vol.35 , Issue.2 , pp. 83-96
  • 39
    • 85131834257 scopus 로고    scopus 로고
    • Biology clearly needs morphometrics. Does morphometrics need biology?
    • Oxnard C, O'Higgins P. Biology clearly needs morphometrics. Does morphometrics need biology?. Biol Theory 2009, 4:84-97.
    • (2009) Biol Theory , vol.4 , pp. 84-97
    • Oxnard, C.1    O'Higgins, P.2
  • 41
    • 36048942133 scopus 로고    scopus 로고
    • Geometric morphometrics
    • Slice DE. Geometric morphometrics. Annual Rev Anthropol 2007, 36:261-281.
    • (2007) Annual Rev Anthropol , vol.36 , pp. 261-281
    • Slice, D.E.1
  • 42
    • 33744472832 scopus 로고    scopus 로고
    • Differences between sliding semi-landmark methods in geometric morphometrics, with an application to human craniofacial and dental cariation
    • 10.1111/j.1469-7580.2006.00576.x, 2100233, 16761977
    • Perez SI, Bernal V, Gonzalez PN. Differences between sliding semi-landmark methods in geometric morphometrics, with an application to human craniofacial and dental cariation. J Anat 2006, 208(6):769-784. 10.1111/j.1469-7580.2006.00576.x, 2100233, 16761977.
    • (2006) J Anat , vol.208 , Issue.6 , pp. 769-784
    • Perez, S.I.1    Bernal, V.2    Gonzalez, P.N.3
  • 43
    • 79958042267 scopus 로고    scopus 로고
    • Evolutionary novelties and losses in geometric morphometrics: a Practical approach through Hominin molar morphology
    • 10.1111/j.1558-5646.2011.01244.x, 21644962
    • Gomez-Robles A, Olejniczak AJ, Martinon-Torres M, Prado-Simon L, de Castro JMB. Evolutionary novelties and losses in geometric morphometrics: a Practical approach through Hominin molar morphology. Evolution 2011, 65(6):1772-1790. 10.1111/j.1558-5646.2011.01244.x, 21644962.
    • (2011) Evolution , vol.65 , Issue.6 , pp. 1772-1790
    • Gomez-Robles, A.1    Olejniczak, A.J.2    Martinon-Torres, M.3    Prado-Simon, L.4    de Castro, J.M.B.5
  • 44
    • 84865556914 scopus 로고    scopus 로고
    • Morphological and genetic divergences in a coral reef damselfish, pomacentrus coelestis
    • Frederich B, Liu SYV, Dai CF. Morphological and genetic divergences in a coral reef damselfish, pomacentrus coelestis. Evol Biol 2012, 39:359-370.
    • (2012) Evol Biol , vol.39 , pp. 359-370
    • Frederich, B.1    Liu, S.Y.V.2    Dai, C.F.3
  • 45
    • 0038959172 scopus 로고    scopus 로고
    • Probabilistic principal component analysis
    • Tipping ME, Bishop CM. Probabilistic principal component analysis. J R Stat Soc B 1999, 61(3):611-622.
    • (1999) J R Stat Soc B , vol.61 , Issue.3 , pp. 611-622
    • Tipping, M.E.1    Bishop, C.M.2
  • 46
    • 0016355478 scopus 로고
    • A new look at the statistical model identification
    • Akaike H. A new look at the statistical model identification. IEEE Trans Automatic Control 1974, 19(6):716-723.
    • (1974) IEEE Trans Automatic Control , vol.19 , Issue.6 , pp. 716-723
    • Akaike, H.1
  • 50
    • 84859327694 scopus 로고    scopus 로고
    • TINA manual landmarking tool: software for the precise digitization of 3D landmarks
    • Schunke AC
    • Schunke AC TINA manual landmarking tool: software for the precise digitization of 3D landmarks. Front Zool 2012, 9(6). Schunke AC.
    • (2012) Front Zool , vol.9 , Issue.6
  • 51
    • 84879211528 scopus 로고    scopus 로고
    • The TINA Geometric Morphometrics Toolkit.
    • Bromiley PA
    • Bromiley PA The TINA Geometric Morphometrics Toolkit. [http://www.tina-vision.net/docs/memos/2010-007.pdf], Bromiley PA.


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