Nutrition Metabolism Plays an Important Role in the Alternate Bearing of the Olive Tree (Olea europaea L.)

PLoS ONE

Volumn 8, Issue 3, 2013, Pages

  Turktas, Mine ^a   Inal, Behcet ^a   Okay, Sezer ^a   Erkilic, Emine Gulden ^a   Dundar, Ekrem ^b   Hernandez, Pilar ^c   Dorado, Gabriel ^d   Unver, Turgay ^a  

^a CANKIRI KARATEKIN UNIVERSITY   (Turkey)

^b BALIKESIR UNIVERSITY   (Turkey)

^c INSTITUTO DE AGRICULTURA SOSTENIBLE   (Spain)

^d UNIVERSITY OF CÓRDOBA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

TRANSCRIPTOME;

ARTICLE; CONTROLLED STUDY; DNA HYBRIDIZATION; DNA SYNTHESIS; EXPRESSED SEQUENCE TAG; FLOWERING; GENE EXPRESSION; GENE EXPRESSION PROFILING; GENETIC TRANSCRIPTION; GERMINATION; GLUCONEOGENESIS; GLYCOLYSIS; HORMONAL REGULATION; ION TRANSPORT; MICROARRAY ANALYSIS; MOLECULAR MECHANICS; NONHUMAN; NUCLEOTIDE SEQUENCE; NUTRITIONAL ASSESSMENT; OLIGONUCLEOTIDE PROBE; OLIVE TREE; OXIDATION REDUCTION REACTION; PERIODICITY; PLANT LEAF; PLANT REPRODUCTION; RNA ISOLATION;

CLUSTER ANALYSIS; FRUIT; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; NUCLEIC ACID HYBRIDIZATION; OLEA; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; OLIGONUCLEOTIDE PROBES; OXYGEN; PLANT LEAVES; TRANSCRIPTION, GENETIC; TRANSCRIPTOME;

OLEA EUROPAEA;

EID: 84875486102     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0059876     Document Type: Article

References (57)

1. Besnard G, Henry P, Wille L, Cooke D, Chapuis D, (2007) On the origin of the invasive olives (Olea europaea L., Oleaceae). Heredity 99: 608-619.
2. Lavee S, (2007) Biennial bearing in olive (Olea europaea). Annales Ser His Nat 17: 101-112.
3. Monselise SP, Goldschmidt EE, (1982) Alternate bearing in fruit trees. Hortic Reviews 4: 128-173.
4. Fernández-Ocaña A, García-López MC, Jiménez-Ruiz J, Saniger L, Macías D, et al. (2010) Identification of a gene involved in the juvenile-to-adult transition (JAT) in cultivated olive trees. Tree Genet Genomes 6: 891-903.
5. Goldschmidt EE, (2005) Regulatory aspects of alternate-bearing in fruit trees. Italus Hortus 12: 11-17.
6. Rosecrance RC, Weinbaum SA, Brown PH, (1998) Alternate bearing affects nitrogen, phosphorus, potassium and starch storage pools in mature pistachio trees. Ann Bot- London 82: 463-470.
7. Baktir I, Ulger S, Kaynak L, Himelrick DG, (2004) Relationship of seasonal changes in endogenous plant hormones and alternate bearing of olive trees. Hort Science 39(5): 987-990.
8. Barranco D, Fernández-Escobar R, Rallo L (Eds): "Olive Growing". 1st English Edition of the 5th revised and enlarged edition of "El Cultivo del Olivo", Mundi-Prensa- Junta de Andalucía- Australian Olive Association (Rural Industries Research and Development Corporation; RIRDC). The 6th edition (2008) is available in Spanish, Mundi-Prensa- Junta de Andalucía (Madrid, Spain) 2010.
9. Ulger S, Sonmez S, Karkacier M, Ertoy N, Akdesir O, et al. (2004) Determination of endogenous hormones, sugars and mineral nutrition levels during the induction, initiation and differentiation stage and their effects on flower formation in olive. Plant Growth Regul 42: 89-95.
10. Ben-Gal A, Yermiyahu U, Zipori I, Presnov E, Hanoch E, et al. (2011) The influence of bearing cycles on olive oil production response to irrigation. Irrig Sci 29: 253-263.
11. Naor A, Schneider D, Ben-Gal A, Zipori I, Dag A et al. (2012) The effects of crop load and irrigation rate in the oil accumulation stage on oil yield and water relations of 'Koroneiki' olives. Irrig Sci doi: 10.1007/s00271-012-0363-z.
12. Martín-Vertedor AI, Rodríguez JMP, Losada HP, Castiel EF, (2011) Interactive responses to water deficits and crop load in olive (olea europaea L., cv. Morisca) I. - Growth and water relations. Agr Water Manage 98: 941-949.
13. Dag A, Bustan A, Avni A, Tzipori I, Lavee S, et al. (2010) Timing of fruit removal affects concurrent vegetative growth and subsequent return bloom and yield in olive (Olea europaea L.). Sci Hortic-Ansterdam 123: 469-472.
14. Huijser P, Schmid M, (2011) The control of developmental phase transitions in plants. Development 138: 4117-4129.
15. Ozdemir-Ozgenturk N, Oruç F, Sezerman U, Kucukural A, Vural Korkut S et al.(2010) Generation and analysis of expressed sequence tags from Olea europaea L. Comp Funct Genom doi:10.1155/2010/757512.
16. Donaire L, Pedrola L, de la Rosa R, Llave C, (2011) High-throughput sequencing of RNA silencing-associated small RNAs in olive (Olea europaea L.). PLoS One 6(11): e27916 doi:10.1371/journal.pone.0027916.
17. Lai Z, Gross BL, Zou Y, Andrews J, Rieseberg LH, (2006) Microarray analysis reveals differential gene expression in hybrid sunflower species. Mol Eco 15: 1213-1227.
18. Wellmer F, Alves-Ferreira M, Dubois A, Riechmann JL, Meyerowitz EM, (2006) Genome-wide analysis of gene expression during early Arabidopsis flower development PLoS Genet. 2(7): 1012-1024.
19. Roach MJ, Dayholos MK, (2007) Microarray analysis of flax (Linum usitatissimum L.) stems identifies transcripts enriched in fibre-bearing phloem tissues. Mol Genet Genomics 278 (2): 149-165.
20. Fenart S, Assoumou Ndong YP, Duorte J, Rivière N, Wilmer J, et al. (2010) Development and validation of a flax (Linum usitatissimum L.) gene expression oligo microarray. BMC Genomics 11: 592.
21. Unver T, Bakar M, Shearman RC, Budak H, (2010) Genome-wide profiling and analysis of Festuca arundinacea miRNAs and transcriptomes in response to foliar glyphosate application. Mol Genet Genomics 283: 397-413.
22. Bonghi C, Trainotti L, Botton A, Tadiello A, Rasori A, et al. (2011) A microarray approach to identify genes involved in seed-pericarp cross-talk and development in peach. BMC Plant Biol 11: 107.
23. An, Yang J, Zhang P, (2012) Transcriptome profiling of low temperature treated cassava apical shoots showed dynamic responses of tropical plant to cold stress. BMC Genomics 13: 64.
24. Bolstad BM, Irizarry RA, Astrand M, Speed TP, (2003) A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 19: 185-193.
25. Irizarry RA, Hobbs B, Collin F, Beazer-Barclay YD, Antonellis KJ, et al. (2003) Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4(2): 249-264.
26. Unver T, Budak H, (2009) Conserved microRNAs and their targets in model grass species Brachypodium distachyon. Planta 230: 659-669.
27. Untergasser A, Cutcutache I, Koressaar T, Ye J, Faircloth BC, et al. (2012) Primer3-new capabilities and interfaces. Nucleic Acids Res 40(15): e115.
28. Unver T, Parmaksi{dotless}z I, Dündar E, (2010a) Identification of conserved micro-RNAs and their target transcripts in opium poppy (Papaver somniferum L.). Plant Cell Rep 29: 757-769.
29. Eldem V, Çelikkol Akçay U, Ozhuner E, Baki{dotless}r Y, Uranbey S, et al. (2012) Genome-Wide Identification of miRNAs Responsive to Drought in Peach (Prunus persica) by High-Throughput Deep Sequencing. PLoS ONE 7(12): e50298 doi:10.1371/journal.pone.0050298.
30. Yanik H, Türktaş M, Dundar E, Hernandez P, Dorado G et al. (2013) Genome-wide identification of alternate bearing-associated miRNA in the olive tree (Olea europaea). BMC Plant Biology doi:10.1186/1471-2229-13-1.
31. Weber M, Harada E, Vess C, von Roepenack-Lahaye E, Clemens S, (2004) Comparative microarray analysis of Arabidopsis thaliana and Arabidopsis halleri roots identifies nicotianamine synthase, a ZIP transporter and other genes as potential metal hyperaccumulation factors. Plant Journal 37(2): 269-281.
32. Moore S, Payton P, Wright M, Tanksley S, Giovannoni J, (2005) Utilization of tomato microarrays for comparative gene expression analysis in the Solanaceae. Journal of Experimental Botany 56(421): 2885-2895.
33. Davey M, Graham N, Vanholme B, Swennen R, May S, et al. (2009) Heterologous oligonucleotide microarrays for transcriptomics in a non-model species; a proof-of-concept study of drought stress in Musa. BMC Genomics 10: 436.
34. Parikh A, Miranda ER, Katoh-Kurasawa M, Fuller D, Rot G, Zagar L, Curk T, Sucgang R, Chen R, Zupan B, Loomis WF, Kuspa A, Shaulsky G, (2010) Conserved developmental transcriptomes in evolutionarily divergent species. Genome Biology 11: R35.
35. Alagna F, Nunzio D'Agostino N, Torchia L, Servili M, Rao R, et al. (2009) Comparative 454 pyrosequencing of transcripts from two olive genotypes during fruit development. BMC Genomics 10: 399.
36. Goldschmidt EE, Golomb A, (1982) Girdling affects carbohydrate related gene expression in leaves bark and roots of alternate bearing citrus trees. Ann Bot- London 107(2): 206-208.
37. Spann TM, Beede RH, Dejong TM, (2008) Seasonal carbohydrate storage and mobilization in bearing and non-bearing pistachio (Pistacia vera) trees. Tree Physiol 28: 207-213.
38. Bustan A, Avni A, Lavee S, Zipori I, Yeselson Y, et al. (2011) Role of carbohydrate reserves in yield production of intensively cultivated oil olive (Olea europaea L.) trees. Tree Physiol 31: 519-530.
39. Stutte G, Martin GC, (1986) Effect of light intensity and carbohydrate reserves on flowering in olive. J Amer Soc Hort Sci 11: 27-31.
40. De la Rosa, R, Rallo L, Rapoport HF, (2000) Olive floral bud growth and starch content during winter rest and spring budbreak. Hort Science 35: 1223-1227.
41. Bouranis DL, Kitsaki CK, Chorianopoulou SN, Aivalakis G, Drossopoulos JB, (1999) Nutritional dynamics of olive tree flowers. J Plant Nutr 22(2): 245-257.
42. Erel R, Dag A, Ben-Gal A, Schwarts A, Yermiyahu U, (2008) Flowering and fruit set of olive trees in response to nitrogen, phosphorus, and potassium. J Amer Soc Hort Sci 133(5): 639-647.
43. Fernândez-Escobar R, Moreno R, Garcia-Creus M, (1999) Seasonal changes of mineral nutrients in olive leaves during the alternate-bearing cycle. Sci Hortic- Amsterdam 82: 25-45.
44. Rowland LJ, Alkharouf N, Darwish O, Ogden EL, Polashock JJ, et al. (2012) Generation and analysis of blueberry transcriptome sequences from leaves, developing fruit, and flower buds from cold acclimation through deacclimation. BMC Plant Biol 12: 46.
45. Pignocchi C, Kiddle G, Hernández I, Foster SJ, Asensi A, et al. (2006) Ascorbate oxidase-dependent changes in the redox state of the apoplast modulate gene transcript accumulation leading to modified hormone signaling and orchestration of defense processes in tobacco. Plant Physiol 141: 423-435.
46. Bonzon M, Simon P, Greppin H, Wagner E, (1983) Pyridine-nucleotides and redox charge evolution during the induction of flowering in spinach leaves. Planta 159: 254-260.
47. Foreman J, Demidchik V, Bothwell JHF, Mylona P, Miedema H, et al. (2003) Reactive oxygen species produced by NADPH oxidase regulate plant cell growth. Nature 422: 442-446.
48. Shalom L, Samuels S, Zur N, Shlizerman L, Zemach H, et al. (2012) Alternate bearing in citrus: changes in the expression of flowering control genes and in global gene expression in on- versus off-crop trees. PLoS ONE 7(10): e46930 doi:10.1371/journal.pone.0046930.
49. Goldschmidt EE, (1999) Carbohydrate supply as a critical factor for citrus fruit development and productivity. Hortscience 34: 1020-1024.
50. Ramel F, Sulmon C, Gouesbet G, Couée I, (2009) Natural variation reveals relationships between pre-stress carbohydrate nutritional status and subsequent responses to xenobiotic and oxidative stress in Arabidopsis thaliana. Ann Bot- London 104: 1323-1337.
51. Grace SC, Logan BA, (2000) Energy dissipation and radical scavenging by the plant phenylpropanoid pathway. Phil Trans Royal Soc London, Series B-Biol Sci 355: 1499-1510.
52. Lavee S, Rallo L, Rapoport HF, Troncoso A, (1996) The floral biology of the olive: effect of flower number, type and distribution on fruitset. Sci Hortic-Amsterdam 66: 149-158.
53. Muñoz-Fambuena N, Mesejo S, Gonźales-Mas MC, Primo-Millo E, Agustí M, et al. (2011) Fruit regulates seasonal expression of flowering genes in alternate-bearing 'Moncada' mandarin. Ann Bot-London 108: 511-519.
54. Ulger S, Bakti{dotless}r İ, Kaynak L, (1999) Zeytinlerde periyodisite ve çiçek tomurcuǧu oluşumu üzerine içsel büyüme hormonlari{dotless}ni{dotless}n etkilerinin saptanmasi{dotless}. Turk J Agric For 23(3): 619-623 (in Tr).
55. Jones WW, Coggins CW, Embleton TW, (1976) Endogenous abscisic acid in relation to bud growth in alternate bearing 'Valencia' orange. Plant Physiol 58: 681-682.
56. Al-Shdiefat SM, Qrunfleh MM, (2008) Alternate bearing of the olive (Olea europaea L.) as related to endogenous hormonal content. JJAS 4(1): 12-25.
57. Lavee S (1986) Olive P: 261-276 In: Monselise SP (ed). CRC handbook of fruit set and development. CRC Press, Boca Raton, Fla.