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Volumn 519, Issue 1, 2013, Pages 41-49

Identification, quantification, and evolutionary analysis of a novel isoform of MCM9

Author keywords

Alternative splicing; Cell cycle; DNA repair; DNA replication; MCM9; QRT PCR

Indexed keywords

CARRIER PROTEINS AND BINDING PROTEINS; HYDROXYUREA; MESSENGER RNA PRECURSOR; MINICHROMOSOME MAINTENANCE PROTEIN 9; MITOMYCIN; RNA ISOFORM; UNCLASSIFIED DRUG;

EID: 84875382326     PISSN: 03781119     EISSN: 18790038     Source Type: Journal    
DOI: 10.1016/j.gene.2013.01.054     Document Type: Article
Times cited : (8)

References (45)
  • 1
    • 5044222204 scopus 로고    scopus 로고
    • How did alternative splicing evolve?
    • Ast G. How did alternative splicing evolve?. Nat. Rev. Genet. 2004, 5:773-782.
    • (2004) Nat. Rev. Genet. , vol.5 , pp. 773-782
    • Ast, G.1
  • 2
    • 84874196588 scopus 로고    scopus 로고
    • Evolutionary diversification of eukaryotic DNA replication machinery
    • Aves S.J., Liu Y., Richards T.A. Evolutionary diversification of eukaryotic DNA replication machinery. Subcell. Biochem. 2012, 62:19-35.
    • (2012) Subcell. Biochem. , vol.62 , pp. 19-35
    • Aves, S.J.1    Liu, Y.2    Richards, T.A.3
  • 3
    • 21244499405 scopus 로고    scopus 로고
    • GAPDH as a housekeeping gene: analysis of GAPDH mRNA expression in a panel of 72 human tissues
    • Barber R.D., Harmer D.W., Coleman R.A., Clark B.J. GAPDH as a housekeeping gene: analysis of GAPDH mRNA expression in a panel of 72 human tissues. Physiol. Genomics 2005, 21:389-395.
    • (2005) Physiol. Genomics , vol.21 , pp. 389-395
    • Barber, R.D.1    Harmer, D.W.2    Coleman, R.A.3    Clark, B.J.4
  • 4
    • 2342618937 scopus 로고    scopus 로고
    • Replication origins: why do we need so many?
    • Bielinsky A.K. Replication origins: why do we need so many?. Cell Cycle 2003, 2:307-309.
    • (2003) Cell Cycle , vol.2 , pp. 307-309
    • Bielinsky, A.K.1
  • 5
    • 1242325944 scopus 로고    scopus 로고
    • Alternative pre-mRNA splicing and neuronal function
    • Black D.L., Grabowski P.J. Alternative pre-mRNA splicing and neuronal function. Prog. Mol. Subcell. Biol. 2003, 31:187-216.
    • (2003) Prog. Mol. Subcell. Biol. , vol.31 , pp. 187-216
    • Black, D.L.1    Grabowski, P.J.2
  • 6
    • 47349114465 scopus 로고    scopus 로고
    • The Mcm2-7 complex has in vitro helicase activity
    • Bochman M.L., Schwacha A. The Mcm2-7 complex has in vitro helicase activity. Mol. Cell 2008, 31:287-293.
    • (2008) Mol. Cell , vol.31 , pp. 287-293
    • Bochman, M.L.1    Schwacha, A.2
  • 7
    • 84861992434 scopus 로고    scopus 로고
    • Activation of the replicative DNA helicase: breaking up is hard to do
    • Boos D., Frigola J., Diffley J.F. Activation of the replicative DNA helicase: breaking up is hard to do. Curr. Opin. Cell Biol. 2012, 24:423-430.
    • (2012) Curr. Opin. Cell Biol. , vol.24 , pp. 423-430
    • Boos, D.1    Frigola, J.2    Diffley, J.F.3
  • 8
    • 79956327961 scopus 로고    scopus 로고
    • Origin single-stranded DNA releases Sld3 protein from the Mcm2-7 complex, allowing the GINS tetramer to bind the Mcm2-7 complex
    • Bruck I., Kaplan D.L. Origin single-stranded DNA releases Sld3 protein from the Mcm2-7 complex, allowing the GINS tetramer to bind the Mcm2-7 complex. J. Biol. Chem. 2011, 286:18602-18613.
    • (2011) J. Biol. Chem. , vol.286 , pp. 18602-18613
    • Bruck, I.1    Kaplan, D.L.2
  • 9
    • 70349092224 scopus 로고    scopus 로고
    • Minichromosome maintenance proteins in cancer screening
    • Coleman N., Laskey R.A. Minichromosome maintenance proteins in cancer screening. Eur. J. Cancer 2009, 45(Suppl. 1):416-417.
    • (2009) Eur. J. Cancer , vol.45 , Issue.SUPPL. 1 , pp. 416-417
    • Coleman, N.1    Laskey, R.A.2
  • 10
    • 58149194136 scopus 로고    scopus 로고
    • Cancer diagnosis and DNA replication
    • Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, M.L. DePamphilis (Ed.)
    • Coleman N., Mills A.D., Laskey R.A. Cancer diagnosis and DNA replication. DNA Replication and Human Disease 2006, 501-518. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY. M.L. DePamphilis (Ed.).
    • (2006) DNA Replication and Human Disease , pp. 501-518
    • Coleman, N.1    Mills, A.D.2    Laskey, R.A.3
  • 12
    • 2242464840 scopus 로고    scopus 로고
    • The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins
    • Dehal P., et al. The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins. Science 2002, 298:2157-2167.
    • (2002) Science , vol.298 , pp. 2157-2167
    • Dehal, P.1
  • 13
    • 81055138204 scopus 로고    scopus 로고
    • Quality control in the initiation of eukaryotic DNA replication
    • Diffley J.F. Quality control in the initiation of eukaryotic DNA replication. Philos. Trans. R. Soc. Lond. B Biol. Sci. 2011, 366:3545-3553.
    • (2011) Philos. Trans. R. Soc. Lond. B Biol. Sci. , vol.366 , pp. 3545-3553
    • Diffley, J.F.1
  • 14
    • 84856981150 scopus 로고    scopus 로고
    • Replication timing: the early bird catches the worm
    • Douglas M.E., Diffley J.F. Replication timing: the early bird catches the worm. Curr. Biol. 2012, 22:R81-R82.
    • (2012) Curr. Biol. , vol.22
    • Douglas, M.E.1    Diffley, J.F.2
  • 15
    • 0032772122 scopus 로고    scopus 로고
    • Minichromosome maintenance proteins as biological markers of dysplasia and malignancy
    • Freeman A., et al. Minichromosome maintenance proteins as biological markers of dysplasia and malignancy. Clin. Cancer Res. 1999, 5:2121-2132.
    • (1999) Clin. Cancer Res. , vol.5 , pp. 2121-2132
    • Freeman, A.1
  • 17
    • 0028820196 scopus 로고
    • Growth imbalance and altered expression of cyclins B1, A, E, and D3 in MOLT-4 cells synchronized in the cell cycle by inhibitors of DNA replication
    • Gong J., Traganos F., Darzynkiewicz Z. Growth imbalance and altered expression of cyclins B1, A, E, and D3 in MOLT-4 cells synchronized in the cell cycle by inhibitors of DNA replication. Cell Growth Differ. 1995, 6:1485-1493.
    • (1995) Cell Growth Differ. , vol.6 , pp. 1485-1493
    • Gong, J.1    Traganos, F.2    Darzynkiewicz, Z.3
  • 18
    • 5044225816 scopus 로고    scopus 로고
    • Geminin predicts adverse clinical outcome in breast cancer by reflecting cell-cycle progression
    • Gonzalez M.A., et al. Geminin predicts adverse clinical outcome in breast cancer by reflecting cell-cycle progression. J. Pathol. 2004, 204:121-130.
    • (2004) J. Pathol. , vol.204 , pp. 121-130
    • Gonzalez, M.A.1
  • 19
    • 80055085862 scopus 로고    scopus 로고
    • Minichromosome maintenance helicase paralog MCM9 is dispensible for DNA replication but functions in germ-line stem cells and tumor suppression
    • Hartford S.A., Luo Y., Southard T.L., Min I.M., Lis J.T., Schimenti J.C. Minichromosome maintenance helicase paralog MCM9 is dispensible for DNA replication but functions in germ-line stem cells and tumor suppression. Proc. Natl. Acad. Sci. U. S. A. 2011, 108:17702-17707.
    • (2011) Proc. Natl. Acad. Sci. U. S. A. , vol.108 , pp. 17702-17707
    • Hartford, S.A.1    Luo, Y.2    Southard, T.L.3    Min, I.M.4    Lis, J.T.5    Schimenti, J.C.6
  • 20
    • 74749095240 scopus 로고    scopus 로고
    • Activation of the MCM2-7 helicase by association with Cdc45 and GINS proteins
    • Ilves I., Petojevic T., Pesavento J.J., Botchan M.R. Activation of the MCM2-7 helicase by association with Cdc45 and GINS proteins. Mol. Cell 2010, 37:247-258.
    • (2010) Mol. Cell , vol.37 , pp. 247-258
    • Ilves, I.1    Petojevic, T.2    Pesavento, J.J.3    Botchan, M.R.4
  • 21
    • 34547491445 scopus 로고    scopus 로고
    • The evolutionary history of proteins involved in pre-replication complex assembly
    • Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, M.L. DePamphilis (Ed.)
    • Iyer L.M., Aravind L. The evolutionary history of proteins involved in pre-replication complex assembly. DNA Replicaiton and Human Disease 2006, 751-757. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY. M.L. DePamphilis (Ed.).
    • (2006) DNA Replicaiton and Human Disease , pp. 751-757
    • Iyer, L.M.1    Aravind, L.2
  • 22
    • 75549085494 scopus 로고    scopus 로고
    • Gene expression atlas at the European bioinformatics institute
    • Kapushesky M., et al. Gene expression atlas at the European bioinformatics institute. Nucleic Acids Res. 2010, 38:D690-D698.
    • (2010) Nucleic Acids Res. , vol.38
    • Kapushesky, M.1
  • 23
    • 64549101067 scopus 로고    scopus 로고
    • Ancient diversification of eukaryotic MCM DNA replication proteins
    • Liu Y., Richards T.A., Aves S.J. Ancient diversification of eukaryotic MCM DNA replication proteins. BMC Evol. Biol. 2009, 9:60.
    • (2009) BMC Evol. Biol. , vol.9 , pp. 60
    • Liu, Y.1    Richards, T.A.2    Aves, S.J.3
  • 24
    • 0035710746 scopus 로고    scopus 로고
    • -δδCT method
    • -δδCT method. Methods 2001, 25:402-408.
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.1
  • 25
    • 28244461615 scopus 로고    scopus 로고
    • Identification of full genes and proteins of MCM9, a novel, vertebrate-specific member of the MCM2-8 protein family
    • Lutzmann M., Maiorano D., Méchali M. Identification of full genes and proteins of MCM9, a novel, vertebrate-specific member of the MCM2-8 protein family. Gene 2005, 362:51-56.
    • (2005) Gene , vol.362 , pp. 51-56
    • Lutzmann, M.1    Maiorano, D.2    Méchali, M.3
  • 26
    • 47349113682 scopus 로고    scopus 로고
    • MCM9 binds Cdt1 and is required for the assembly of prereplication complexes
    • Lutzmann M., Méchali M. MCM9 binds Cdt1 and is required for the assembly of prereplication complexes. Mol. Cell 2008, 31:190-200.
    • (2008) Mol. Cell , vol.31 , pp. 190-200
    • Lutzmann, M.1    Méchali, M.2
  • 27
    • 84865368229 scopus 로고    scopus 로고
    • MCM8- and MCM9-deficient mice reveal gametogenesis defects and genome instability due to impaired homologous recombination
    • Lutzmann M., et al. MCM8- and MCM9-deficient mice reveal gametogenesis defects and genome instability due to impaired homologous recombination. Mol. Cell 2012, 47:523-534.
    • (2012) Mol. Cell , vol.47 , pp. 523-534
    • Lutzmann, M.1
  • 28
    • 26244431903 scopus 로고    scopus 로고
    • Right place, right time, and only once: replication initation in metazoans
    • Machida Y.J., Hamlin J.L., Dutta A. Right place, right time, and only once: replication initation in metazoans. Cell 2005, 123:13-24.
    • (2005) Cell , vol.123 , pp. 13-24
    • Machida, Y.J.1    Hamlin, J.L.2    Dutta, A.3
  • 30
    • 84865353862 scopus 로고    scopus 로고
    • Mcm8 and Mcm9 form a complex that functions in homologous recombination repair induced by DNA interstrand crosslinks
    • Nishimura K., et al. Mcm8 and Mcm9 form a complex that functions in homologous recombination repair induced by DNA interstrand crosslinks. Mol. Cell 2012, 47:511-522.
    • (2012) Mol. Cell , vol.47 , pp. 511-522
    • Nishimura, K.1
  • 31
    • 0034611749 scopus 로고    scopus 로고
    • The Cdt1 protein is required to license DNA for replication in fission yeast
    • Nishitani H., Lygerou Z., Nurse P. The Cdt1 protein is required to license DNA for replication in fission yeast. Nature 2000, 404:625-628.
    • (2000) Nature , vol.404 , pp. 625-628
    • Nishitani, H.1    Lygerou, Z.2    Nurse, P.3
  • 32
    • 56749098074 scopus 로고    scopus 로고
    • Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing
    • Pan Q., Shai O., Lee L.J., Frey B.J., Blencowe B.J. Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing. Nat. Genet. 2008, 40:1413-1415.
    • (2008) Nat. Genet. , vol.40 , pp. 1413-1415
    • Pan, Q.1    Shai, O.2    Lee, L.J.3    Frey, B.J.4    Blencowe, B.J.5
  • 33
    • 76849109722 scopus 로고    scopus 로고
    • Hydroxyurea-stalled replication forks become progressively inactivated and require two different RAD51-mediated pathways for restart and repair
    • Petermann E.O., Orta M.L., Issaeva N., Schultz N., Helleday T. Hydroxyurea-stalled replication forks become progressively inactivated and require two different RAD51-mediated pathways for restart and repair. Mol. Cell 2010, 37:492-502.
    • (2010) Mol. Cell , vol.37 , pp. 492-502
    • Petermann, E.O.1    Orta, M.L.2    Issaeva, N.3    Schultz, N.4    Helleday, T.5
  • 34
    • 34948840390 scopus 로고    scopus 로고
    • Cancer-associated missplicing of exon 4 influences the subnuclear distribution of the DNA replication factor CIZ1
    • Rahman F.A., Ainscough J.F., Copeland N., Coverley D. Cancer-associated missplicing of exon 4 influences the subnuclear distribution of the DNA replication factor CIZ1. Hum. Mutat. 2007, 28:993-1004.
    • (2007) Hum. Mutat. , vol.28 , pp. 993-1004
    • Rahman, F.A.1    Ainscough, J.F.2    Copeland, N.3    Coverley, D.4
  • 35
    • 70549085855 scopus 로고    scopus 로고
    • Eukaryotic DNA replication control: lock and load, then fire
    • Remus D., Diffley J.F. Eukaryotic DNA replication control: lock and load, then fire. Curr. Opin. Cell Biol. 2009, 21:771-777.
    • (2009) Curr. Opin. Cell Biol. , vol.21 , pp. 771-777
    • Remus, D.1    Diffley, J.F.2
  • 36
    • 0034615626 scopus 로고    scopus 로고
    • Initiation of genome replication: assembly and disassembly of replication-competent chromatin
    • Ritzi M., Knippers R. Initiation of genome replication: assembly and disassembly of replication-competent chromatin. Gene 2000, 245:13-20.
    • (2000) Gene , vol.245 , pp. 13-20
    • Ritzi, M.1    Knippers, R.2
  • 37
    • 34547870179 scopus 로고    scopus 로고
    • Genome-wide analysis of the core DNA replication machinery in the higher plants Arabidopsis and rice
    • Shultz R.W., Tatineni V.M., Hanley-Bowdoin L., Thompson W.F. Genome-wide analysis of the core DNA replication machinery in the higher plants Arabidopsis and rice. Plant Physiol. 2007, 144:1697-1714.
    • (2007) Plant Physiol. , vol.144 , pp. 1697-1714
    • Shultz, R.W.1    Tatineni, V.M.2    Hanley-Bowdoin, L.3    Thompson, W.F.4
  • 38
    • 34248216458 scopus 로고    scopus 로고
    • APC/C - the master controller of origin licensing
    • Sivaorasad U., Machida Y.J., Dutta A. APC/C - the master controller of origin licensing. Cell Div. 2007, 2:2-8.
    • (2007) Cell Div. , vol.2 , pp. 2-8
    • Sivaorasad, U.1    Machida, Y.J.2    Dutta, A.3
  • 39
    • 77951246258 scopus 로고    scopus 로고
    • Dynamics of pre-replicative complex assembly
    • Tsakraklides V., Bell S.P. Dynamics of pre-replicative complex assembly. J. Biol. Chem. 2010, 285:9437-9443.
    • (2010) J. Biol. Chem. , vol.285 , pp. 9437-9443
    • Tsakraklides, V.1    Bell, S.P.2
  • 40
    • 84870014470 scopus 로고    scopus 로고
    • Novel functions of the phosphatase SHP2 in the DNA replication and damage checkpoints
    • Tsang Y.H., Han X., Man W.Y., Lee N., Poon R.Y. Novel functions of the phosphatase SHP2 in the DNA replication and damage checkpoints. PLoS One 2012, 7:1.
    • (2012) PLoS One , vol.7 , pp. 1
    • Tsang, Y.H.1    Han, X.2    Man, W.Y.3    Lee, N.4    Poon, R.Y.5
  • 41
    • 0032438199 scopus 로고    scopus 로고
    • Improved cervical smear assessment using antibodies against proteins that regulate DNA replication
    • Williams G.H., et al. Improved cervical smear assessment using antibodies against proteins that regulate DNA replication. Proc. Natl. Acad. Sci. U. S. A. 1998, 95:14932-14937.
    • (1998) Proc. Natl. Acad. Sci. U. S. A. , vol.95 , pp. 14932-14937
    • Williams, G.H.1
  • 42
    • 18044379915 scopus 로고    scopus 로고
    • Identification of a novel cell-cycle-induced MCM family protein MCM9
    • Yoshida K. Identification of a novel cell-cycle-induced MCM family protein MCM9. Biochem. Biophys. Res. Commun. 2005, 331:669-674.
    • (2005) Biochem. Biophys. Res. Commun. , vol.331 , pp. 669-674
    • Yoshida, K.1
  • 43
    • 0031921640 scopus 로고    scopus 로고
    • Statistical features of human exons and their flanking regions
    • Zhang M.Q. Statistical features of human exons and their flanking regions. Hum. Mol. Genet. 1998, 7:919-932.
    • (1998) Hum. Mol. Genet. , vol.7 , pp. 919-932
    • Zhang, M.Q.1
  • 44
    • 35448950862 scopus 로고    scopus 로고
    • Dual-specificity splice sites function alternatively as 5' and 3' splice sites
    • Zhang C., Hastings M.L., Krainer A.R., Zhang M.Q. Dual-specificity splice sites function alternatively as 5' and 3' splice sites. Proc. Natl. Acad. Sci. U. S. A. 2007, 104:15028-15033.
    • (2007) Proc. Natl. Acad. Sci. U. S. A. , vol.104 , pp. 15028-15033
    • Zhang, C.1    Hastings, M.L.2    Krainer, A.R.3    Zhang, M.Q.4
  • 45
    • 65149096757 scopus 로고    scopus 로고
    • A whole-genome assembly of the domestic cow, Bos taurus
    • Zimin A.V., et al. A whole-genome assembly of the domestic cow, Bos taurus. Genome Biol. 2009, 10:R42.
    • (2009) Genome Biol. , vol.10
    • Zimin, A.V.1


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