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Volumn 108, Issue 4, 2013, Pages 232-240

Analysis of aberrant splicing and nonsense-mediated decay of the stop codon mutations c.109G>T and c.504_505delCT in 7 patients with HMG-CoA lyase deficiency

Author keywords

Alternative splicing; HMG CoA lyase deficiency; HMGCL; NAS; NMD

Indexed keywords

3 HYDROXY 3 METHYLGLUTARIC ACID; CYTOSINE; GUANINE; HYDROXYMETHYLGLUTARYL COENZYME A LYASE; MESSENGER RNA; PUROMYCIN; THYMINE;

EID: 84875279691     PISSN: 10967192     EISSN: 10967206     Source Type: Journal    
DOI: 10.1016/j.ymgme.2013.01.019     Document Type: Article
Times cited : (10)

References (36)
  • 2
    • 0022995791 scopus 로고
    • 3-Hydroxy-3-methylglutaryl-coenzyme a lyase deficiency: a review
    • Wysocki S.J., Hähnel R. 3-Hydroxy-3-methylglutaryl-coenzyme a lyase deficiency: a review. J. Inherit. Metab. Dis. 1986, 9(3):225-233.
    • (1986) J. Inherit. Metab. Dis. , vol.9 , Issue.3 , pp. 225-233
    • Wysocki, S.J.1    Hähnel, R.2
  • 3
    • 0024260942 scopus 로고
    • 3-Hydroxy-3-methylglutaryl-coenzyme A lyase deficiency: review of 18 reported patients
    • Gibson K.M., Breuer J., Nyhan W.L. 3-Hydroxy-3-methylglutaryl-coenzyme A lyase deficiency: review of 18 reported patients. Eur. J. Pediatr. 1988, 148(3):180-186.
    • (1988) Eur. J. Pediatr. , vol.148 , Issue.3 , pp. 180-186
    • Gibson, K.M.1    Breuer, J.2    Nyhan, W.L.3
  • 6
    • 33646343977 scopus 로고    scopus 로고
    • Crystal structure of human 3-hydroxy-3-methylglutaryl-CoA Lyase: insights into catalysis and the molecular basis for hydroxymethylglutaric aciduria
    • Fu Z., Runquist J.A., Forouhar F., Hussain M., Hunt J.F., Miziorko H.M., Kim J.J. Crystal structure of human 3-hydroxy-3-methylglutaryl-CoA Lyase: insights into catalysis and the molecular basis for hydroxymethylglutaric aciduria. J. Biol. Chem. 2006, 281(11):7526-7532.
    • (2006) J. Biol. Chem. , vol.281 , Issue.11 , pp. 7526-7532
    • Fu, Z.1    Runquist, J.A.2    Forouhar, F.3    Hussain, M.4    Hunt, J.F.5    Miziorko, H.M.6    Kim, J.J.7
  • 7
    • 0027520577 scopus 로고
    • 3-Hydroxy-3-methylglutaryl coenzyme A lyase (HL): cloning and characterization of a mouse liver HL cDNA and subchromosomal mapping of the human and mouse HL genes
    • Wang S., Nadeau J.H., Duncan A., Robert M.F., Fontaine G., Schappert K., Johnson K.R., Zietkiewicz E., Hruz P., Miziorko H., et al. 3-Hydroxy-3-methylglutaryl coenzyme A lyase (HL): cloning and characterization of a mouse liver HL cDNA and subchromosomal mapping of the human and mouse HL genes. Mamm. Genome 1993, 4(7):382-387.
    • (1993) Mamm. Genome , vol.4 , Issue.7 , pp. 382-387
    • Wang, S.1    Nadeau, J.H.2    Duncan, A.3    Robert, M.F.4    Fontaine, G.5    Schappert, K.6    Johnson, K.R.7    Zietkiewicz, E.8    Hruz, P.9    Miziorko, H.10
  • 11
    • 0030896093 scopus 로고    scopus 로고
    • A nonsense mutation in the 3-hydroxy-3-methylglutaryl-CoA lyase gene produces exon skipping in two patients of different origin with 3-hydroxy-3-methylglutaryl-CoA lyase deficiency
    • Pié J., Casals N., Casale C.H., Buesa C., Mascaró C., Barceló A., Rolland M.O., Zabot T., Haro D., Eyskens F., Divry P., Hegardt F.G. A nonsense mutation in the 3-hydroxy-3-methylglutaryl-CoA lyase gene produces exon skipping in two patients of different origin with 3-hydroxy-3-methylglutaryl-CoA lyase deficiency. Biochem. J. 1997, 323(Pt 2):329-335.
    • (1997) Biochem. J. , vol.323 , Issue.PART 2 , pp. 329-335
    • Pié, J.1    Casals, N.2    Casale, C.H.3    Buesa, C.4    Mascaró, C.5    Barceló, A.6    Rolland, M.O.7    Zabot, T.8    Haro, D.9    Eyskens, F.10    Divry, P.11    Hegardt, F.G.12
  • 13
    • 0030666635 scopus 로고    scopus 로고
    • A two-base deletion in exon 6 of the 3-hydroxy-3-methylglutaryl coenzyme A lyase (HL) gene producing the skipping of exons 5 and 6 determines 3-hydroxy-3-methylglutaric aciduria
    • Casals N., Pié J., Casale C.H., Zapater N., Ribes A., Castro-Gago M., Rodriguez-Segade S., Wanders R.J., Hegardt F.G. A two-base deletion in exon 6 of the 3-hydroxy-3-methylglutaryl coenzyme A lyase (HL) gene producing the skipping of exons 5 and 6 determines 3-hydroxy-3-methylglutaric aciduria. J. Lipid Res. 1997, 38(11):2303-2313.
    • (1997) J. Lipid Res. , vol.38 , Issue.11 , pp. 2303-2313
    • Casals, N.1    Pié, J.2    Casale, C.H.3    Zapater, N.4    Ribes, A.5    Castro-Gago, M.6    Rodriguez-Segade, S.7    Wanders, R.J.8    Hegardt, F.G.9
  • 14
    • 0742323558 scopus 로고    scopus 로고
    • Nonsense-mediated mRNA decay: splicing, translation and mRNPdynamics
    • Maquat L.E. Nonsense-mediated mRNA decay: splicing, translation and mRNPdynamics. Nat. Rev. Mol. Cell Biol. 2004, 5(2):89-99.
    • (2004) Nat. Rev. Mol. Cell Biol. , vol.5 , Issue.2 , pp. 89-99
    • Maquat, L.E.1
  • 15
    • 0037064145 scopus 로고    scopus 로고
    • Separable roles for rent1/hUpf1 in altered splicing and decay of nonsense mRNA transcripts
    • ap
    • Mendell J.T., ap Rhys C.M., Dietz H.C. Separable roles for rent1/hUpf1 in altered splicing and decay of nonsense mRNA transcripts. Science 2002, 298(5592):419-422.
    • (2002) Science , vol.298 , Issue.5592 , pp. 419-422
    • Mendell, J.T.1    Rhys, C.M.2    Dietz, H.C.3
  • 16
    • 0037025175 scopus 로고    scopus 로고
    • Alternatively spliced TCR mRNA induced by disruption of reading frame
    • Wang J., Hamilton J.I., Carter M.S., Li S., Wilkinson M.F. Alternatively spliced TCR mRNA induced by disruption of reading frame. Science 2002, 297(5578):108-110.
    • (2002) Science , vol.297 , Issue.5578 , pp. 108-110
    • Wang, J.1    Hamilton, J.I.2    Carter, M.S.3    Li, S.4    Wilkinson, M.F.5
  • 17
    • 0030725216 scopus 로고    scopus 로고
    • Disruption of the splicing enhancer sequence within exon 27 of the dystrophin gene by a nonsense mutation induces partial skipping of the exon and is responsible for Becker muscular dystrophy
    • Shiga N., Takeshima Y., Sakamoto H., Inoue K., Yokota Y., Yokoyama M., Matsuo M. Disruption of the splicing enhancer sequence within exon 27 of the dystrophin gene by a nonsense mutation induces partial skipping of the exon and is responsible for Becker muscular dystrophy. J. Clin. Invest. 1997, 100(9):2204-2210.
    • (1997) J. Clin. Invest. , vol.100 , Issue.9 , pp. 2204-2210
    • Shiga, N.1    Takeshima, Y.2    Sakamoto, H.3    Inoue, K.4    Yokota, Y.5    Yokoyama, M.6    Matsuo, M.7
  • 18
    • 12844283834 scopus 로고    scopus 로고
    • Alternative splicing induced by nonsense mutations in the immunoglobulin mu VDJ exon is independent of truncation of the open reading frame
    • Bühler M., Mühlemann O. Alternative splicing induced by nonsense mutations in the immunoglobulin mu VDJ exon is independent of truncation of the open reading frame. RNA 2005, 11(2):139-146.
    • (2005) RNA , vol.11 , Issue.2 , pp. 139-146
    • Bühler, M.1    Mühlemann, O.2
  • 24
    • 35648958676 scopus 로고    scopus 로고
    • Alternatively spliced T-cell receptor transcripts are up-regulated in response to disruption of either splicing elements or reading frame
    • Chang Y.F., Chan W.K., Imam J.S., Wilkinson M.F. Alternatively spliced T-cell receptor transcripts are up-regulated in response to disruption of either splicing elements or reading frame. J. Biol. Chem. 2007, 282(41):29738-29747.
    • (2007) J. Biol. Chem. , vol.282 , Issue.41 , pp. 29738-29747
    • Chang, Y.F.1    Chan, W.K.2    Imam, J.S.3    Wilkinson, M.F.4
  • 25
    • 33845674953 scopus 로고    scopus 로고
    • Splicing analysis disclosed a determinant single nucleotide for exon skipping caused by a novel intraexonic four-nucleotide deletion in the dystrophin gene
    • Tran V.K., Takeshima Y., Zhang Z., Yagi M., Nishiyama A., Habara Y., Matsuo M. Splicing analysis disclosed a determinant single nucleotide for exon skipping caused by a novel intraexonic four-nucleotide deletion in the dystrophin gene. J. Med. Genet. 2006, 43(12):924-930.
    • (2006) J. Med. Genet. , vol.43 , Issue.12 , pp. 924-930
    • Tran, V.K.1    Takeshima, Y.2    Zhang, Z.3    Yagi, M.4    Nishiyama, A.5    Habara, Y.6    Matsuo, M.7
  • 26
    • 0037443035 scopus 로고    scopus 로고
    • Pre-mRNA splicing and human disease
    • Faustino N.A., Cooper T.A. Pre-mRNA splicing and human disease. Genes Dev. 2003, 17(4):419-437.
    • (2003) Genes Dev. , vol.17 , Issue.4 , pp. 419-437
    • Faustino, N.A.1    Cooper, T.A.2
  • 27
    • 0028136599 scopus 로고
    • Maintenance of an open reading frame as an additional level of scrutiny during splice site selection
    • Dietz H.C., Kendzior R.J. Maintenance of an open reading frame as an additional level of scrutiny during splice site selection. Nat. Genet. 1994, 8(2):183-188.
    • (1994) Nat. Genet. , vol.8 , Issue.2 , pp. 183-188
    • Dietz, H.C.1    Kendzior, R.J.2
  • 28
    • 0030988942 scopus 로고    scopus 로고
    • Identification of a new class of exonic splicing enhancers by in vivo selection
    • Coulter L.R., Landree M.A., Cooper T.A. Identification of a new class of exonic splicing enhancers by in vivo selection. Mol. Cell. Biol. 1997, 17(4):2143-2150.
    • (1997) Mol. Cell. Biol. , vol.17 , Issue.4 , pp. 2143-2150
    • Coulter, L.R.1    Landree, M.A.2    Cooper, T.A.3
  • 29
    • 33745501015 scopus 로고    scopus 로고
    • General and specific functions of exonic splicing silencers in splicing control
    • Wang Z., Xiao X., Van Nostrand E., Burge C.B. General and specific functions of exonic splicing silencers in splicing control. Mol. Cell 2006, 23(1):61-70.
    • (2006) Mol. Cell , vol.23 , Issue.1 , pp. 61-70
    • Wang, Z.1    Xiao, X.2    Van Nostrand, E.3    Burge, C.B.4
  • 30
    • 10944256767 scopus 로고    scopus 로고
    • Systematic identification and analysis of exonic splicing silencers
    • Wang Z., Rolish M.E., Yeo G., Tung V., Mawson M., Burge C.B. Systematic identification and analysis of exonic splicing silencers. Cell 2004, 119(6):831-845.
    • (2004) Cell , vol.119 , Issue.6 , pp. 831-845
    • Wang, Z.1    Rolish, M.E.2    Yeo, G.3    Tung, V.4    Mawson, M.5    Burge, C.B.6
  • 31
    • 26944453614 scopus 로고    scopus 로고
    • Splicing in action: assessing disease causing sequence changes
    • Baralle D., Baralle M. Splicing in action: assessing disease causing sequence changes. J. Med. Genet. 2005, 42(10):737-748.
    • (2005) J. Med. Genet. , vol.42 , Issue.10 , pp. 737-748
    • Baralle, D.1    Baralle, M.2
  • 32
    • 0032104190 scopus 로고    scopus 로고
    • A rule for termination-codon position within intron-containing genes: when nonsense affects RNA abundance
    • Nagy E., Maquat L.E. A rule for termination-codon position within intron-containing genes: when nonsense affects RNA abundance. Trends Biochem. Sci. 1998, 23(6):198-199.
    • (1998) Trends Biochem. Sci. , vol.23 , Issue.6 , pp. 198-199
    • Nagy, E.1    Maquat, L.E.2
  • 33
    • 0037422575 scopus 로고    scopus 로고
    • Evidence for the widespread coupling of alternative splicing and nonsense-mediated mRNA decay in humans
    • Lewis B.P., Green R.E., Brenner S.E. Evidence for the widespread coupling of alternative splicing and nonsense-mediated mRNA decay in humans. Proc. Natl. Acad. Sci. U.S.A. 2003, 100(1):189-192.
    • (2003) Proc. Natl. Acad. Sci. U.S.A. , vol.100 , Issue.1 , pp. 189-192
    • Lewis, B.P.1    Green, R.E.2    Brenner, S.E.3
  • 34
    • 58649117962 scopus 로고    scopus 로고
    • The mammalian nonsense-mediated mRNA decay pathway: to decay or not to decay! Which players make the decision?
    • Silva A.L., Romao L. The mammalian nonsense-mediated mRNA decay pathway: to decay or not to decay! Which players make the decision?. FEBS Lett. 2009, 583(3):499-505.
    • (2009) FEBS Lett. , vol.583 , Issue.3 , pp. 499-505
    • Silva, A.L.1    Romao, L.2
  • 35
    • 0034625379 scopus 로고    scopus 로고
    • Determinants of 4-repeat tau expression. Coordination between enhancing and inhibitory splicing sequences for exon 10 inclusion
    • D'Souza I., Schellenberg G.D. Determinants of 4-repeat tau expression. Coordination between enhancing and inhibitory splicing sequences for exon 10 inclusion. J. Biol. Chem. 2000, 275(23):17700-17709.
    • (2000) J. Biol. Chem. , vol.275 , Issue.23 , pp. 17700-17709
    • D'Souza, I.1    Schellenberg, G.D.2
  • 36
    • 23644432376 scopus 로고    scopus 로고
    • The splicing machinery is a genetic modifier of disease severity
    • Nissim-Rafinia M., Kerem B. The splicing machinery is a genetic modifier of disease severity. Trends Genet. 2005, 21(9):480-483.
    • (2005) Trends Genet. , vol.21 , Issue.9 , pp. 480-483
    • Nissim-Rafinia, M.1    Kerem, B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.