메뉴 건너뛰기




Volumn 110, Issue 12, 2013, Pages 4673-4678

Identification of genetic variants influencing the human plasma proteome

Author keywords

Population proteomics; Protein quantitative trait loci

Indexed keywords

APOLIPOPROTEIN E; PLASMA PROTEIN; PROTEOME;

EID: 84875238998     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1217238110     Document Type: Article
Times cited : (71)

References (34)
  • 1
    • 77957947562 scopus 로고    scopus 로고
    • Hundreds of variants clustered in genomic loci and biological pathways affect human height
    • Lango Allen H, et al. (2010) Hundreds of variants clustered in genomic loci and biological pathways affect human height. Nature 467(7317):832-838.
    • (2010) Nature , vol.467 , Issue.7317 , pp. 832-838
    • Lango Allen, H.1
  • 2
    • 77955505564 scopus 로고    scopus 로고
    • Biological, clinical and population relevance of 95 loci for blood lipids
    • Teslovich TM, et al. (2010) Biological, clinical and population relevance of 95 loci for blood lipids. Nature 466(7307):707-713.
    • (2010) Nature , vol.466 , Issue.7307 , pp. 707-713
    • Teslovich, T.M.1
  • 3
    • 77950460661 scopus 로고    scopus 로고
    • Understanding mechanisms underlying human gene expression variation with RNA sequencing
    • Pickrell JK, et al. (2010) Understanding mechanisms underlying human gene expression variation with RNA sequencing. Nature 464(7289):768-772.
    • (2010) Nature , vol.464 , Issue.7289 , pp. 768-772
    • Pickrell, J.K.1
  • 4
    • 80052964856 scopus 로고    scopus 로고
    • Understanding the contribution of synonymous mutations to human disease
    • Sauna ZE, Kimchi-Sarfaty C (2011) Understanding the contribution of synonymous mutations to human disease. Nat Rev Genet 12(10):683-691.
    • (2011) Nat Rev Genet , vol.12 , Issue.10 , pp. 683-691
    • Sauna, Z.E.1    Kimchi-Sarfaty, C.2
  • 5
    • 34548805282 scopus 로고    scopus 로고
    • A genome-wide association study of global gene expression
    • Dixon AL, et al. (2007) A genome-wide association study of global gene expression. Nat Genet 39(10):1202-1207.
    • (2007) Nat Genet , vol.39 , Issue.10 , pp. 1202-1207
    • Dixon, A.L.1
  • 6
    • 34548719076 scopus 로고    scopus 로고
    • Discovery of expression QTLs using large-scale transcriptional profiling in human lymphocytes
    • Göring HH, et al. (2007) Discovery of expression QTLs using large-scale transcriptional profiling in human lymphocytes. Nat Genet 39(10):1208-1216.
    • (2007) Nat Genet , vol.39 , Issue.10 , pp. 1208-1216
    • Göring, H.H.1
  • 7
    • 75749134031 scopus 로고    scopus 로고
    • A genome-wide perspective of genetic variation in human metabolism
    • Illig T, et al. (2010) A genome-wide perspective of genetic variation in human metabolism. Nat Genet 42(2):137-141.
    • (2010) Nat Genet , vol.42 , Issue.2 , pp. 137-141
    • Illig, T.1
  • 8
    • 79957604338 scopus 로고    scopus 로고
    • A genome-wide association study of metabolic traits in human urine
    • Suhre K, et al. (2011) A genome-wide association study of metabolic traits in human urine. Nat Genet 43(6):565-569.
    • (2011) Nat Genet , vol.43 , Issue.6 , pp. 565-569
    • Suhre, K.1
  • 9
    • 79956322553 scopus 로고    scopus 로고
    • Global quantification of mammalian gene expression control
    • Schwanhäusser B, et al. (2011) Global quantification of mammalian gene expression control. Nature 473(7347):337-342.
    • (2011) Nature , vol.473 , Issue.7347 , pp. 337-342
    • Schwanhäusser, B.1
  • 10
    • 44949201115 scopus 로고    scopus 로고
    • A genome-wide association study identifies protein quantitative trait loci (pQTLs)
    • Melzer D, et al. (2008) A genome-wide association study identifies protein quantitative trait loci (pQTLs). PLoS Genet 4(5):e1000072.
    • (2008) PLoS Genet , vol.4 , Issue.5
    • Melzer, D.1
  • 11
    • 77954732472 scopus 로고    scopus 로고
    • Identification of quantitative trait loci underlying proteome variation in human lymphoblastoid cells
    • Garge N, et al. (2010) Identification of quantitative trait loci underlying proteome variation in human lymphoblastoid cells. Mol Cell Proteomics 9(7):1383-1399.
    • (2010) Mol Cell Proteomics , vol.9 , Issue.7 , pp. 1383-1399
    • Garge, N.1
  • 12
    • 84865083411 scopus 로고    scopus 로고
    • Identification of cis-regulatory variation influencing protein abundance levels in human plasma
    • AddNeuroMed Consortium; Alzheimer's Disease Neuroimaging Initiative
    • Lourdusamy A, et al.; AddNeuroMed Consortium; Alzheimer's Disease Neuroimaging Initiative (2012) Identification of cis-regulatory variation influencing protein abundance levels in human plasma. Hum Mol Genet 21(16):3719-3726.
    • (2012) Hum Mol Genet , vol.21 , Issue.16 , pp. 3719-3726
    • Lourdusamy, A.1
  • 13
    • 3042818018 scopus 로고    scopus 로고
    • The International Protein Index: An integrated database for proteomics experiments
    • Kersey PJ, et al. (2004) The International Protein Index: An integrated database for proteomics experiments. Proteomics 4(7):1985-1988.
    • (2004) Proteomics , vol.4 , Issue.7 , pp. 1985-1988
    • Kersey, P.J.1
  • 14
    • 84860833500 scopus 로고    scopus 로고
    • Reorganizing the protein space at the Universal Protein Resource (UniProt)
    • The UniProt Consortium, (Database issue)
    • The UniProt Consortium (2012) Reorganizing the protein space at the Universal Protein Resource (UniProt). Nucleic Acids Res 40(Database issue):D71-5.
    • (2012) Nucleic Acids Res , vol.40
  • 15
    • 77956637896 scopus 로고    scopus 로고
    • Genetics and beyond - The transcriptome of human monocytes and disease susceptibility
    • Zeller T, et al. (2010) Genetics and beyond - the transcriptome of human monocytes and disease susceptibility. PLoS ONE 5(5):e10693.
    • (2010) PLoS ONE , vol.5 , Issue.5
    • Zeller, T.1
  • 16
    • 84866156922 scopus 로고    scopus 로고
    • Novel loci for metabolic networks and multi-tissue expression studies reveal genes for atherosclerosis
    • Inouye M, et al. (2012) Novel loci for metabolic networks and multi-tissue expression studies reveal genes for atherosclerosis. PLoS Genet 8(8):e1002907.
    • (2012) PLoS Genet , vol.8 , Issue.8
    • Inouye, M.1
  • 17
    • 34249677215 scopus 로고    scopus 로고
    • Haptoglobin: A review of the major allele frequencies worldwide and their association with diseases
    • Carter K, Worwood M (2007) Haptoglobin: A review of the major allele frequencies worldwide and their association with diseases. Int J Lab Hematol 29(2):92-110.
    • (2007) Int J Lab Hematol , vol.29 , Issue.2 , pp. 92-110
    • Carter, K.1    Worwood, M.2
  • 18
    • 76749113896 scopus 로고    scopus 로고
    • Modeling of environmental effects in genome-wide association studies identifies SLC2A2 and HP as novel loci influencing serum cholesterol levels
    • EUROSPAN Consortium
    • Igl W, et al.; EUROSPAN Consortium (2010) Modeling of environmental effects in genome-wide association studies identifies SLC2A2 and HP as novel loci influencing serum cholesterol levels. PLoS Genet 6(1):e1000798.
    • (2010) PLoS Genet , vol.6 , Issue.1
    • Igl, W.1
  • 19
    • 0026532992 scopus 로고
    • Haptoglobin subtypes in Norway and a review of HP subtypes in various populations
    • Teige B, Olaisen B, Teisberg P (1992) Haptoglobin subtypes in Norway and a review of HP subtypes in various populations. Hum Hered 42(2):93-106.
    • (1992) Hum Hered , vol.42 , Issue.2 , pp. 93-106
    • Teige, B.1    Olaisen, B.2    Teisberg, P.3
  • 21
    • 0001644020 scopus 로고    scopus 로고
    • The human plasma proteome: History, character, and diagnostic prospects
    • Anderson NL, Anderson NG (2002) The human plasma proteome: History, character, and diagnostic prospects. Mol Cell Proteomics 1(11):845-867.
    • (2002) Mol Cell Proteomics , vol.1 , Issue.11 , pp. 845-867
    • Anderson, N.L.1    Anderson, N.G.2
  • 22
    • 8844233567 scopus 로고    scopus 로고
    • Mass spectrometric quantitation of peptides and proteins using Stable Isotope Standards and Capture by Anti-Peptide Antibodies (SISCAPA)
    • Anderson NL, et al. (2004) Mass spectrometric quantitation of peptides and proteins using Stable Isotope Standards and Capture by Anti-Peptide Antibodies (SISCAPA). J Proteome Res 3(2):235-244.
    • (2004) J Proteome Res , vol.3 , Issue.2 , pp. 235-244
    • Anderson, N.L.1
  • 23
    • 83055168555 scopus 로고    scopus 로고
    • Building and searching tandem mass spectral libraries for peptide identification
    • Lam H (2011) Building and searching tandem mass spectral libraries for peptide identification. Mol Cell Proteomics: 10(12):R111. 008565.
    • (2011) Mol Cell Proteomics , vol.10 , Issue.12
    • Lam, H.1
  • 24
    • 79958789920 scopus 로고    scopus 로고
    • Systematic review and meta-analysis of the association between complement component 3 and age-related macular degeneration: A HuGE review and meta-analysis
    • Thakkinstian A, et al. (2011) Systematic review and meta-analysis of the association between complement component 3 and age-related macular degeneration: A HuGE review and meta-analysis. Am J Epidemiol 173(12):1365-1379.
    • (2011) Am J Epidemiol , vol.173 , Issue.12 , pp. 1365-1379
    • Thakkinstian, A.1
  • 25
    • 33746874504 scopus 로고    scopus 로고
    • Variation at APOE and STH loci and Alzheimer's disease
    • Zuo L, et al. (2006) Variation at APOE and STH loci and Alzheimer's disease. Behav Brain Funct 2:13.
    • (2006) Behav Brain Funct , vol.2 , pp. 13
    • Zuo, L.1
  • 26
    • 0034694856 scopus 로고    scopus 로고
    • World Medical Association Declaration of Helsinki: Ethical principles for medical research involving human subjects
    • EUROSPAN Consortium
    • Anonymous (2000) World Medical Association Declaration of Helsinki: Ethical principles for medical research involving human subjects. JAMA 284(23):3043-3045.
    • (2000) JAMA , vol.284 , Issue.23 , pp. 3043-3045
  • 27
    • 77149153374 scopus 로고    scopus 로고
    • Comparison of participant information and informed consent forms of five European studies in genetic isolated populations
    • EUROSPAN consortium
    • Mascalzoni D, et al.; EUROSPAN consortium (2010) Comparison of participant information and informed consent forms of five European studies in genetic isolated populations. Eur J Hum Genet 18(3):296-302.
    • (2010) Eur J Hum Genet , vol.18 , Issue.3 , pp. 296-302
    • Mascalzoni, D.1
  • 28
    • 0035984343 scopus 로고    scopus 로고
    • Peptide mapping of proteins in human body fluids using electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry
    • Bergquist J, Palmblad M, Wetterhall M, Håkansson P, Markides KE (2002) Peptide mapping of proteins in human body fluids using electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry. Mass Spectrom Rev 21(1): 2-15.
    • (2002) Mass Spectrom Rev , vol.21 , Issue.1 , pp. 2-15
    • Bergquist, J.1    Palmblad, M.2    Wetterhall, M.3    Håkansson, P.4    Markides, K.E.5
  • 29
    • 34447324105 scopus 로고    scopus 로고
    • GenABEL: An R library for genome- wide association analysis
    • Aulchenko YS, Ripke S, Isaacs A, van Duijn CM (2007) GenABEL: An R library for genome- wide association analysis. Bioinformatics 23(10):1294-1296.
    • (2007) Bioinformatics , vol.23 , Issue.10 , pp. 1294-1296
    • Aulchenko, Y.S.1    Ripke, S.2    Isaacs, A.3    Van Duijn, C.M.4
  • 30
    • 67651222400 scopus 로고    scopus 로고
    • A flexible and accurate genotype imputation method for the next generation of genome-wide association studies
    • Howie BN, Donnelly P, Marchini J (2009) A flexible and accurate genotype imputation method for the next generation of genome-wide association studies. PLoS Genet 5(6): e1000529.
    • (2009) PLoS Genet , vol.5 , Issue.6
    • Howie, B.N.1    Donnelly, P.2    Marchini, J.3
  • 31
    • 84975742565 scopus 로고    scopus 로고
    • A map of human genome variation from population-scale sequencing
    • 1000 Genomes Project Consortium
    • Abecasis GR, et al.; 1000 Genomes Project Consortium (2010) A map of human genome variation from population-scale sequencing. Nature 467(7319):1061-1073.
    • (2010) Nature , vol.467 , Issue.7319 , pp. 1061-1073
    • Abecasis, G.R.1
  • 32
    • 33644874573 scopus 로고    scopus 로고
    • The UCSC genome browser database: Update 2006
    • (Database issue)
    • Hinrichs AS, et al. (2006) The UCSC Genome Browser Database: Update 2006. Nucleic Acids Res 34(Database issue):D590-D598.
    • (2006) Nucleic Acids Res , vol.34
    • Hinrichs, A.S.1
  • 33
    • 45449097447 scopus 로고    scopus 로고
    • Fdrtool: A versatile R package for estimating local and tail areabased false discovery rates
    • Strimmer K (2008) fdrtool: A versatile R package for estimating local and tail areabased false discovery rates. Bioinformatics 24(12):1461-1462.
    • (2008) Bioinformatics , vol.24 , Issue.12 , pp. 1461-1462
    • Strimmer, K.1
  • 34
    • 34547628858 scopus 로고    scopus 로고
    • Family-based association tests for genomewide association scans
    • Chen WM, Abecasis GR (2007) Family-based association tests for genomewide association scans. Am J Hum Genet 81(5):913-926.
    • (2007) Am J Hum Genet , vol.81 , Issue.5 , pp. 913-926
    • Chen, W.M.1    Abecasis, G.R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.