Gene flow and genetic diversity of chimpanzees in Tanzanian habitats

Primate Conservation

Volumn 26, Issue 1, 2013, Pages 67-74

  Inoue, Eiji ^a   Tashiro, Yasuko ^b   Ogawa, Hideshi ^c   Inoue Murayama, Miho ^a   Nishida, Toshisada ^a   Takenaka, Osamu ^a  

^a KYOTO UNIVERSITY   (Japan)

^b HAYASHIBARA BIOCHEMICAL LABORATORIES INC   (Japan)

^c CHUKYO UNIVERSITY   (Japan)

Author keywords

Chimpanzee; gene flow; genetic diversity; Tanzania

Indexed keywords

EID: 84875149888     PISSN: 08986207     EISSN: None     Source Type: Journal    
DOI: 10.1896/052.026.0105     Document Type: Article

References (34)

1. Anthony, N. M., M. Johnson-Bawe, K. Jeffery, S. L. Clifford, K. A. Abernethy, C. E. Tutin, S. A. Lahm, L. J. T. White, J. F. Utley, E. J. Wickings and M. W. Bruford. 2007. The role of Pleistocene refugia and rivers in shaping gorilla genetic diversity in central Africa. Proc. Natl. Acad. Sci. U.S.A. 104: 20432-20436
2. Boesch, C. and H. Boesch-Achermann. 2000. The Chimpanzees of the Tai Forest. Oxford University Press, Oxford
3. Bakusa, J. and E. McManus 2005. United Republic of Tanzania. In: World Atlas of Great Apes and their Conservation, J. Caldecott and L. Miles (eds.), pp.53-81. University of California Press, Berkeley
4. Eriksson, J. H., G., C. Boesch and L. Vigilant. 2004. Rivers influence the population genetic structure of bonobos (Pan paniscus). Mol. Ecol. 13: 3425-3435 (Pubitemid 39415676)
5. Excoffier, L., G. Laval and S. Schneider. 2005. Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evol. Bioinform. Online 1: 47-50
6. Gagneux, P., C. Wills, U. Gerloff, D. Tautz, P. A. Morin, C. Boesch, B. Fruth, G. Hohmann, O. A. Ryder and D. S. Woodruff. 1999. Mitochondrial sequences show diverse evolutionary histories of African hominoids. Proc. Natl. Acad. Sci. U. S. A. 96: 5077-5082 (Pubitemid 29214538)
7. Goldberg, T. L. and M. Ruvolo. 1997a. The geographic apportionment of mitochondrial genetic diversity in East African chimpanzees, Pan troglodytes schweinfurthii. Mol. Biol. Evol. 14: 976-984 (Pubitemid 27362651)
8. Goldberg, T. L. and M. Ruvolo. 1997b. Molecular phylogenetics and historical biogeography of East African chimpanzees. Biol. J. Linn. Soc. Lond. 61: 301-324 (Pubitemid 27341061)
9. Goldberg, T. L. 1998. Biogeographic predictors of genetic diversity in populations of eastern African chimpanzees (Pan troglodytes schweinfurthii). Int. J. Primatol. 19: 237-254 (Pubitemid 28228795)
10. Inskipp, T. 2005. Chimpanzee (Pan troglodytes). In: World Atlas of Great Apes and their Conservation. J. Caldecott and L. Miles (eds.), pp.53-81. University of California Press, Berkeley
11. Inoue, E. 2005. DNA sampling and DNA analysis of chimpanzees at Mahale. Pan Africa News, 12(2): 22-24
12. Inoue, E., M. Inoue-Murayama, L. Vigilant, O. Takenaka and T. Nishida. 2008. Relatedness in wild chimpanzees: influence of paternity, male philopatry, and demographic factors. Am. J. Phys. Anthropol. 137: 256-262
13. Keele, B. F., F. Van Heuverswyn, Y. Y. Li, E. Bailes, J. Takehisa, M. L. Santiago, F. Bibollet-Ruche, Y. L. Chen, L. V. Wain, F. Liegeois, S. Loul, E. Mpoudi Ngole, Y. Bienvenue, E. Delaporte, J. F. Y. Brookfield, P. M. Sharp, G. M. Shaw, M. Peeters and B. H. Hahn. 2006. Chimpanzee reservoirs of pandemic and nonpandemic HIV-1. Science 313: 523-526 (Pubitemid 44148457)
14. Kano, T. 1972. Distribution and adaptation of the chimpanzee on the eastern shore of Lake Tanganyika. Kyoto Univ. Afr. Stud. 7: 37-129
15. Langergraber, K. E., H. Seidel, J. C. Mitani, R. W. Wrangham, V. Reynolds, K. Hunts and L. Vigilant. 2007. The genetic signature of sex-biased migration in patrilocal chimpanzees and humans. Plos One 2(10): e973. doi:10.1371/ journal.pone.0000973 (Pubitemid 351472374)
16. Langergraber, K. E., C. Boesch, E. Inoue, M. Inoue- Murayama, J. C. Mitani JC, T. Nishida, A. Pusey, V. Reynolds, G. Schubert, R. W. Wrangham, E. Wroblewski and L. Vigilant. 2011. Genetic and 'cultural' similarity in wild chimpanzees. Proc. Roy. Soc. B. 278: 408-416
17. Massawe, E. T. 1992. Assessment of the status of chimpanzee populations in western Tanzania. Afr. Stud. Monogr. 13: 35-55
18. Morin, P. A., J. J. Moore, R. Chakraborty, L. Jin, J. Goodall and D. S. Woodruff. 1994. Kin selection, social structure, gene flow, and the evolution of chimpanzees. Science 265:1193-1201 (Pubitemid 24291977)
19. Nei, M. and W. H. Li. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. U.S.A. 76: 5269-5273 (Pubitemid 10236121)
20. Nishida, T. 1979. The social structure of chimpanzees of the Mahale Mountains. In: The Great Apes. D. Hamburg and E. McCown (eds.), pp.73-121. B. Cummings, Menlo Park, California
21. Nishida, T. 1989. A note on the chimpanzee ecology of the Ugalla area. Primates 30: 129-138
22. Nishida, T. 1990. The Chimpanzees of the Mahale Mountains. University of Tokyo Press, Tokyo
23. Ogawa, H., M. Kanamori and S. H. Mukeni. 1997. The discovery of chimpanzees in the Lwazi River area, Tanzania: a new southern distribution limit. Pan Africa News 4(1): 1-3
24. Ogawa, H., T. Sakamaki and G. Idani. 2006a. The influence of Congolese refugees on chimpanzees in the Lilanshimba area, Tanzania. Pan Africa News 13(2): 21-22
25. Ogawa, H., J. Moore and S. Kamenya. 2006b. Chimpanzees in the Ntakata and Kakungu areas, Tanzania. Primate Conserv. 21: 97-101
26. Pusey, A. E. 1979. Intercommunity transfer of chimpanzees in Gombe National Park. In: The Great Apes. D. Hamburg and E. McCown (eds.), pp.465-479. B. Cummings, Menlo Park, California
27. Pusey, A. E., L. Pintea, M. L. Wilson, S. Kamenya and J. Goodall 2007. The contribution of long-term research at Gombe National Park to chimpanzee conservation. Conserv. Biol. 21: 623-634 (Pubitemid 46802221)
28. Saitou, N. and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425
29. Shimada, M. K., S. Hayakawa, S. Fujita, Y. Sugiyama and N. Saitou. 2009. Skewed matrilineal genetic composition in a small wild chimpanzee community. Folia Primatol. 80: 19-32
30. Tamura, K, M. Nei and S. Kumar. 2004. Prospects for inferring very large phylogenies by using the neighbor-joining method. Proc. Natl. Acad. Sci. U.S.A. 101:11030-11035 (Pubitemid 38989579)
31. Tamura, K., J. Dudley, M. Nei and S. Kumar. 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599 (Pubitemid 47236692)
32. Whitaker, B. E. 2002. Refugees in west Tanzania: the distribution of burdens and benefits among local hosts. J. Refug. Stud. 15: 339-358 (Pubitemid 36128937)
33. Yoshikawa M, H. Ogawa, T. Sakamaki and G. Idani. 2008. Population density of chimpanzees in Tanzania. Pan Africa News 15(2): 17-20
34. Zamma K., E. Inoue, M. Mwami, B. Haluna, S. Athumani and S. Huseni. 2004. On the chimpanzees of Kakungu, Karobwa and Ntakata. Pan Africa News 11(1): 8-10