-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul,S.F. et al. (1990) Basic local alignment search tool. J. Mol. Biol., 215, 403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
-
2
-
-
78449297680
-
SmashCommunity: A metagenomic annotation and analysis tool
-
Arumugam,M. et al. (2010) SmashCommunity: a metagenomic annotation and analysis tool. Bioinformatics, 26, 2977-2978.
-
(2010)
Bioinformatics
, vol.26
, pp. 2977-2978
-
-
Arumugam, M.1
-
3
-
-
0034069495
-
Gene Ontology: Tool for the unification of biology
-
Ashburner,M. et al. (2000) Gene Ontology: tool for the unification of biology. Nat. Genet., 25, 25-29.
-
(2000)
Nat. Genet.
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
-
4
-
-
79959216386
-
ModEnzA: Accurate identification of metabolic enzymes using function specific profile HMMs with optimized discrimination threshold and modified emission probabilities
-
Article ID 743782
-
Desai,D.K. et al. (2011) ModEnzA: accurate identification of metabolic enzymes using function specific profile HMMs with optimized discrimination threshold and modified emission probabilities. Adv. Bioinformatics, 2011, Article ID 743782.
-
(2011)
Adv. Bioinformatics, 2011
-
-
Desai, D.K.1
-
6
-
-
33744804299
-
Metagenomic analysis of the human distal gut microbiome
-
Gill,S.R. et al. (2006) Metagenomic analysis of the human distal gut microbiome. Science, 312, 1355-1359.
-
(2006)
Science
, vol.312
, pp. 1355-1359
-
-
Gill, S.R.1
-
7
-
-
33847702910
-
MEGAN analysis of metagenomic data
-
Huson,D.H. et al. (2007) MEGAN analysis of metagenomic data. Genome Res., 17, 377-386.
-
(2007)
Genome Res.
, vol.17
, pp. 377-386
-
-
Huson, D.H.1
-
8
-
-
78149423315
-
Metagenomes from high-temperature chemotrophic systems reveal geochemical controls on microbial community structure and function
-
Inskeep,W.P. et al. (2010) Metagenomes from high-temperature chemotrophic systems reveal geochemical controls on microbial community structure and function. Plos One, 5, e9773.
-
(2010)
Plos One
, vol.5
-
-
Inskeep, W.P.1
-
9
-
-
84858983547
-
KEGG for integration and interpretation of large-scale molecular data sets
-
Kanehisa,M. et al. (2012) KEGG for integration and interpretation of large-scale molecular data sets. Nucleic Acids Res., 40, D109-D114.
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Kanehisa, M.1
-
10
-
-
53549118607
-
The metagenomics RAST server-A public resource for the automatic phylogenetic and functional analysis of metagenomes
-
Meyer,F. et al. (2008) The metagenomics RAST server-a public resource for the automatic phylogenetic and functional analysis of metagenomes. BMC Bioinformatics, 9, 386.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 386
-
-
Meyer, F.1
-
11
-
-
77951945504
-
Identifying biologically relevant differences between metagenomic communities
-
Parks,D.H. and Beiko,R.G. (2010) Identifying biologically relevant differences between metagenomic communities. Bioinformatics, 26, 715-721.
-
(2010)
Bioinformatics
, vol.26
, pp. 715-721
-
-
Parks, D.H.1
Beiko, R.G.2
-
12
-
-
84858077472
-
The Pfam protein families database
-
Punta,M. et al. (2012) The Pfam protein families database. Nucleic Acids Res., 40, D290-D301.
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Punta, M.1
-
13
-
-
78651266825
-
Community cyberinfrastructure for Advanced Microbial Ecology Research and Analysis: The CAMERA resource
-
Sun,S. et al. (2011) Community cyberinfrastructure for Advanced Microbial Ecology Research and Analysis: the CAMERA resource. Nucleic Acids Res., 39, D546-D551.
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Sun, S.1
-
14
-
-
79959954965
-
IPath2.0: Interactive pathway explorer
-
Yamada,T. et al. (2011) iPath2.0: interactive pathway explorer. Nucleic Acids Res, 39, W412-W415.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Yamada, T.1
|