Arabinose induces pellicle formation by Vibrio fischeri

Applied and Environmental Microbiology

Volumn 79, Issue 6, 2013, Pages 2069-2080

  Visick, Karen L ^a   Quirke, Kevin P ^a   McEwen, Sheila M ^a  

^a LOYOLA UNIVERSITY MEDICAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOFILM FORMATION; GROWTH OF CELLS; IN-CONTROL; MARINE BACTERIUM; MULTICELLULAR COMMUNITIES; PHENOL RED; PRODUCTION OF; SOLE CARBON SOURCE; STATIC CULTURE; VIBRIO FISCHERI;

BACTERIA; PHENOLS;

BIOFILMS;

ARABINOSE;

AIR-WATER INTERACTION; BACTERIUM; BIOFILM; CATABOLISM; CELLULOSE; COLONIZATION; MARINE ECOSYSTEM; MICROBIAL COMMUNITY; MOTILITY; SYMBIONT;

ALIIVIBRIO FISCHERI; ARTICLE; BACTERIAL GENE; BIOFILM; CHEMISTRY; CULTURE MEDIUM; DRUG EFFECT; GENE EXPRESSION REGULATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; LOCOMOTION; METABOLISM; PHYSIOLOGY; SYMBIOSIS;

ALIIVIBRIO FISCHERI; ARABINOSE; BIOFILMS; CULTURE MEDIA; GENES, BACTERIAL; LOCOMOTION; MUTAGENESIS, INSERTIONAL; SYMBIOSIS;

EID: 84874805199     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.03526-12     Document Type: Article

References (72)

1. Hooper LV, Xu J, Falk PG, Midtvedt T, Gordon JI. 1999. A molecular sensor that allows a gut commensal to control its nutrient foundation in a competitive ecosystem. Proc. Natl. Acad. Sci. U. S. A.; 96:9833-9838.
2. Branda SS, Vik S, Friedman L, Kolter R. 2005. Biofilms: the matrix revisited. Trends Microbiol. 13:20-26.
3. Costerton JW, Lewandowski Z, Caldwell DE, Korber DR, Lappin-Scott HM. 1995. Microbial biofilms. Annu. Rev. Microbiol. 49:711-745.
4. Palmer RJ, Jr, Stoodley P. 2007. Biofilms 2007: broadened horizons and new emphases. J. Bacteriol. 189:7948-7960.
5. Petrova OE, Schurr JR, Schurr MJ, Sauer K. 2012. Microcolony formation by the opportunistic pathogen Pseudomonas aeruginosa requires pyruvate and pyruvate fermentation. Mol. Microbiol. 86:819-835.
6. Kierek K, Watnick PI. 2003. Environmental determinants of Vibrio cholerae biofilm development. Appl. Environ. Microbiol. 69:5079-5088.
7. O'Toole GA, Kolter R. 1998. Flagellar and twitching motility are necessary for Pseudomonas aeruginosa biofilm development. Mol. Microbiol. 30:295-304.
8. O'Toole GA, Kolter R. 1998. Initiation of biofilm formation in Pseudomonas fluorescens WCS365 proceeds via multiple, convergent signalling pathways: a genetic analysis. Mol. Microbiol. 28:449-461.
9. Pratt LA, Kolter R. 1998. Genetic analysis of Escherichia coli biofilm formation: roles of flagella, motility, chemotaxis and type I pili. Mol. Microbiol. 30:285-293.
10. Watnick PI, Kolter R. 1999. Steps in the development of a Vibrio cholerae El Tor biofilm. Mol. Microbiol. 34:586-595.
11. Ariyakumar DS, Nishiguchi MK. 2009. Characterization of two hostspecific genes, mannose-sensitive hemagglutinin (mshA) and uridyl phosphate dehydrogenase (UDPDH) that are involved in the Vibrio fischeri-Euprymna tasmanica mutualism. FEMS Microbiol. Lett. 299:65-73.
12. Hadi N, Yang Q, Barnett TC, Tabei SM, Kirov SM, Shaw JG. 2012. Bundle-forming pilus locus of Aeromonas veronii bv. Sobria. Infect. Immun.; 80:1351-1360.
13. Watnick PI, Fullner KJ, Kolter R. 1999. A role for the mannose-sensitive hemagglutinin in biofilm formation by Vibrio cholerae El Tor. J. Bacteriol. 181:3606-3609.
14. Ross P, Mayer R, Benziman M. 1991. Cellulose biosynthesis and function in bacteria. Microbiol. Rev. 55:35-58.
15. Spiers AJ, Bohannon J, Gehrig SM, Rainey PB. 2003. Biofilm formation at the air-liquid interface by the Pseudomonas fluorescens SBW25 wrinkly spreader requires an acetylated form of cellulose. Mol. Microbiol. 50:15-27.
16. Solano C, Garcia B, Valle J, Berasain C, Ghigo JM, Gamazo C, Lasa I. 2002. Genetic analysis of Salmonella enteritidis biofilm formation: critical role of cellulose. Mol. Microbiol. 43:793-808.
17. Zogaj X, Nimtz M, Rohde M, Bokranz W, Romling U. 2001. The multicellular morphotypes of Salmonella typhimurium and Escherichia coli produce cellulose as the second component of the extracellular matrix. Mol. Microbiol. 39:1452-1463.
18. Berk V, Fong JC, Dempsey GT, Develioglu ON, Zhuang X, Liphardt J, Yildiz FH, Chu S. 2012. Molecular architecture and assembly principles of Vibrio cholerae biofilms. Science 337:236-239.
19. Romero D, Aguilar C, Losick R, Kolter R. 2010. Amyloid fibers provide structural integrity to Bacillus subtilis biofilms. Proc. Natl. Acad. Sci. U. S. A. 107:2230-2234.
20. Visick KL. 2009. An intricate network of regulators controls biofilm formation and colonization by Vibrio fischeri. Mol. Microbiol. 74:782-789. Visick et al.
21. Nyholm SV, McFall-Ngai MJ. 2004. The winnowing: establishing the squid-Vibrio symbiosis. Nat. Rev. Microbiol. 2:632-642.
22. Nyholm SV, Stabb EV, Ruby EG, McFall-Ngai MJ. 2000. Establishment of an animal-bacterial association: recruiting symbiotic vibrios from the environment. Proc. Natl. Acad. Sci. U. S. A. 97:10231-10235.
23. Morris AR, Darnell CL, Visick KL. 2011. Inactivation of a novel response regulator is necessary for biofilm formation and host colonization by Vibrio fischeri. Mol. Microbiol. 82:114-130.
24. Yip ES, Geszvain K, DeLoney-Marino CR, Visick KL. 2006. The symbiosis regulator RscS controls the syp gene locus, biofilm formation and symbiotic aggregation by Vibrio fischeri. Mol. Microbiol. 62:1586-1600.
25. Bassis CM, Visick KL. 2010. The cyclic-di-GMP phosphodiesterase BinA negatively regulates cellulose-containing biofilms in Vibrio fischeri. J. Bacteriol. 192:1269-1278.
26. Darnell CL, Hussa EA, Visick KL. 2008. The putative hybrid sensor kinase SypF coordinates biofilm formation in Vibrio fischeri by acting upstream of two response regulators, SypG and VpsR. J. Bacteriol.; 190:4941-4950.
27. Millikan DS, Ruby EG. 2003. FlrA, a 54-dependent transcriptional activator in Vibrio fischeri, is required for motility and symbiotic light-organ colonization. J. Bacteriol. 185:3547-3557.
28. Millikan DS, Ruby EG. 2004. Vibrio fischeri flagellin A is essential for normal motility and for symbiotic competence during initial squid light organ colonization. J. Bacteriol.; 186:4315-4325.
29. Boettcher KJ, Ruby EG. 1990. Depressed light emission by symbiotic Vibrio fischeri of the sepiolid squid Euprymna scolopes. J. Bacteriol. 172: 3701-3706.
30. Deloney-Marino CR, Visick KL. 2012. Role for cheR of Vibrio fischeri in the Vibrio-squid symbiosis. Can. J. Microbiol. 58:29-38.
31. DeLoney CR, Bartley TM, Visick KL. 2002. Role for phosphoglucomutase in Vibrio fischeri-Euprymna scolopes symbiosis. J. Bacteriol. 184:5121-5129.
32. Hussa EA, O'Shea TM, Darnell CL, Ruby EG, Visick KL. 2007. Twocomponent response regulators of Vibrio fischeri: identification, mutagenesis, and characterization. J. Bacteriol. 189:5825-5838.
33. Hussa EA, Darnell CL, Visick KL. 2008. RscS functions upstream of SypG to control the syp locus and biofilm formation in Vibrio fischeri. J. Bacteriol. 190:4576-4583.
34. Shibata S, Yip ES, Quirke KP, Ondrey JM, Visick KL. 2012. Roles of the structural symbiosis polysaccharide (syp) genes in host colonization, biofilm formation, and polysaccharide biosynthesis in Vibrio fischeri. J. Bacteriol. 194:6736-6747.
35. Herrero M, de Lorenzo V, Timmis KN. 1990. Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in Gram-negative bacteria. J. Bacteriol. 172:6557-6567.
36. Le Roux F, Binesse J, Saulnier D, Mazel D. 2007. Construction of a Vibrio splendidus mutant lacking the metalloprotease gene vsm by use of a novel counterselectable suicide vector. Appl. Environ. Microbiol. 73:777-784.
37. Dunlap PV. 1989. Regulation of luminescence by cyclic AMP in cya-like and crp-like mutants of Vibrio fischeri. J. Bacteriol. 171:1199-1202.
38. Graf J, Dunlap PV, Ruby EG. 1994. Effect of transposon-induced motility mutations on colonization of the host light organ by Vibrio fischeri. J. Bacteriol. 176:6986-6991.
39. Yip ES, Grublesky BT, Hussa EA, Visick KL. 2005. A novel, conserved cluster of genes promotes symbiotic colonization and 54-dependent biofilm formation by Vibrio fischeri. Mol. Microbiol. 57:1485-1498.
40. Ruby EG, Nealson KH. 1977. Pyruvate production and excretion by the luminous marine bacteria. Appl. Environ. Microbiol. 34:164-169.
41. DeLoney-Marino CR, Wolfe AJ, Visick KL. 2003. Chemoattraction of Vibrio fischeri to serine, nucleosides, and N-acetylneuraminic acid, a component of squid light-organ mucus. Appl. Environ. Microbiol.69:7527-7530.
42. Davis RW, Botstein D, Roth JR. 1980. Advanced bacterial genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
43. Stabb EV, Ruby EG. 2002. RP4-based plasmids for conjugation between Escherichia coli and members of the Vibrionaceae. Methods Enzymol. 358: 413-426
44. Aeckersberg F, Lupp C, Feliciano B, Ruby EG. 2001. Vibrio fischeri outer membrane protein OmpU plays a role in normal symbiotic colonization. J. Bacteriol. 183:6590-6597.
45. Horton RM, Hunt HD, Ho SN, Pullen JK, Pease LR. 1989. Engineering hybrid genes without the use of restriction enzymes: gene splicing by overlap extension. Gene 77:61-68.
46. Shibata S, Visick KL. 2012. Sensor kinase RscS induces the production of antigenically distinct outer membrane vesicles that depend on the symbiosis polysaccharide locus in Vibrio fischeri. J. Bacteriol. 194:185-194.
47. Lyell NL, Dunn AK, Bose JL, Vescovi SL, Stabb EV. 2008. Effective mutagenesis of Vibrio fischeri by using hyperactive mini-Tn5 derivatives. Appl. Environ. Microbiol. 74: 7059-7063
48. Miller JH. 1972. Experiments in molecular genetics. Cold Spring Harbor Laboratory, New York, NY.
49. Lowry OH, Rosebrough NJ, Farr AL, Randall RJ. 1951. Protein measurement with the Folin phenol reagent. J. Biol. Chem. 193: 265-275
50. McCann J, Stabb EV, Millikan DS, Ruby EG. 2003. Population dynamics of Vibrio fischeri during infection of Euprymna scolopes. Appl. Environ. Microbiol. 69:5928-5934.
51. Wolfe AJ, Millikan DS, Campbell JM, Visick KL. 2004. Vibrio fischeri 54 controls motility, biofilm formation, luminescence, and colonization. Appl. Environ. Microbiol. 70:2520-2524.
52. Ruby EG, Urbanowski M, Campbell J, Dunn A, Faini M, Gunsalus R, Lostroh P, Lupp C, McCann J, Millikan D, Schaefer A, Stabb E, Stevens A, Visick K, Whistler C, Greenberg EP. 2005. Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with pathogenic congeners. Proc. Natl. Acad. Sci. U. S. A. 102:3004-3009.
53. Lin ECC. 1996. Dissimilatory pathways for sugars, polyols, and carboxylates, p 307-342. In Neidhardt FC, Curtiss R, III, Ingraham JL, Lin ECC, Low KB, Magasanik B, Reznikoff WS, Riley M, Schaechter M, Umbarger HE (ed), Escherichia coli and Salmonella: 2nd ed, vol 1. ASM Press, Washington, DC.
54. Yap MN, Yang CH, Barak JD, Jahn CE, Charkowski AO. 2005. The Erwinia chrysanthemi type III secretion system is required for multicellular behavior. J. Bacteriol. 187: 639-648
55. Kavita K, Mishra A, Jha B. 2011. Isolation and physico-chemical characterisation of extracellular polymeric substances produced by the marine bacterium Vibrio parahaemolyticus. Biofouling 27:309-317.
56. Yadav KK, Mandal AK, Sen IK, Chakraborti S, Islam SS, Chakraborty R. 2012. Flocculating property of extracellular polymeric substances produced by a biofilm-forming bacterium Acinetobacter junii BB1A. Appl. Biochem. Biotechnol. 168:1621-1634.
57. Kanmani P, Satish kumar R, Yuvaraj RN, Paari KA, Pattukumar V, Arul V. 2011. Production and purification of a novel exopolysaccharide from lactic acid bacterium Streptococcus phocae PI80 and its functional characteristics activity in vitro. Bioresour. Technol.102,4827-4833
58. O'Shea TM, Deloney-Marino CR, Shibata S, Aizawa S, Wolfe AJ, Visick KL. 2005. Magnesium promotes flagellation of Vibrio fischeri. J. Bacteriol. 187:2058-2065.
59. Krispin O, Allmansberger R. 1998. The Bacillus subtilis galE gene is essential in the presence of glucose and galactose. J. Bacteriol. 180:2265-2270.
60. Sarker RI, Okabe Y, Tsuda M, Tsuchiya T. 1996. Sequence of a Na/glucose symporter gene and its flanking regions of Vibrio parahaemolyticus. Biochim. Biophys. Acta 1281:1-4.
61. Turk E, Kim O, le Coutre J, Whitelegge JP, Eskandari S, Lam JT, Kreman M, Zampighi G, Faull KF, Wright EM. 2000. Molecular characterization of Vibrio parahaemolyticus vSGLT: a model for sodiumcoupled sugar cotransporters. J. Biol. Chem. 275:25711-25716.
62. Xie Z, Turk E, Wright EM. 2000. Characterization of the Vibrio parahaemolyticus Na/glucose cotransporter. A bacterial member of the sodium/glucose transporter (SGLT) family. J. Biol. Chem. 275: 25959-25964.
63. Geddes BA, Oresnik IJ. 2012. Inability to catabolize galactose leads to increased ability to compete for nodule occupancy in Sinorhizobium meliloti. J. Bacteriol.1945044-5053
64. Houot L, Watnick PI. 2008. A novel role for enzyme I of the Vibrio cholerae phosphoenolpyruvate phosphotransferase system in regulation of growth in a biofilm. J. Bacteriol.190,311-320
65. Peng F, Peng P, Xu F, Sun RC. 2012. Fractional purification and bioconversion of hemicelluloses. Biotechnol. Adv. 30:879-903.
66. Rao EV, Ramana KS. 1991. Structural studies of a polysaccharide isolated from the green seaweed Chaetomorpha anteninna. Carbohydr. Res. 217: 163-170.
67. Steinberg PD, Rene S, Kjelleberg S. 1997. Chemical defenses of seaweeds against microbial colonization. Biodegradation 8:211-220.
68. Yuvaraj N, Kanmani P, Satishkumar R, Paari KA, Pattukumar V, Arul V. 2011. Extraction, purification and partial characterization of Cladophora glomerata against multidrug resistant human pathogen Acinetobacter baumannii and fish pathogens. World J. Fish Mar. Sci. 3:51-57.
69. Mahmud ZH, Neogi SB, Kassu A, Mai Huong BT, Jahid IK, Islam MS, Ota F. 2008. Occurrence, seasonality and genetic diversity of Vibrio vulnificus in coastal seaweeds and water along the Kii Channel, Japan. FEMS Microbiol. Ecol. 64:209-218.
70. Mahmud ZH, Neogi SB, Kassu A, Wada T, Islam MS, Nair GB, Ota F. 2007. Seaweeds as a reservoir for diverse Vibrio parahaemolyticus populations in Japan. Int. J. Food Microbiol. 118:92-96.
71. Dalisay DS, Webb JS, Scheffel A, Svenson C, James S, Holmstrom C, Egan S, Kjelleberg S. 2006. A mannose-sensitive haemagglutinin (MSHA)-like pilus promotes attachment of Pseudoalteromonas tunicata cells to the surface of the green alga Ulva australis. Microbiology 152: 2875-2883.
72. Ray VA, Visick KL. 2012. LuxU connects quorum sensing to biofilm formation in Vibrio fischeri. Mol. Microbiol. 86:954-970.