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Volumn 84, Issue 1, 2013, Pages 60-74

Microbial community changes at a terrestrial volcanic CO2 vent induced by soil acidification and anaerobic microhabitats within the soil column

Author keywords

carbon capture and storage; DGGE; Gas flux measurement; qPCR; Soil ecology

Indexed keywords

BIOLOGICAL MARKER; CARBON DIOXIDE; NITROGEN; RIBOSOME RNA; RNA 16S;

EID: 84874701141     PISSN: 01686496     EISSN: 15746941     Source Type: Journal    
DOI: 10.1111/1574-6941.12040     Document Type: Article
Times cited : (48)

References (39)
  • 1
    • 0029751291 scopus 로고    scopus 로고
    • Quantification of gas fluxes from the subcontinental mantle: the example of Laacher See, a maar lake in Germany
    • Aeschbach-Hertig W, Kipfer R, Hofer M, Imboden DM, Wieler R & Signer P (1996) Quantification of gas fluxes from the subcontinental mantle: the example of Laacher See, a maar lake in Germany. Geochim Cosmochim Acta 60: 31-41.
    • (1996) Geochim Cosmochim Acta , vol.60 , pp. 31-41
    • Aeschbach-Hertig, W.1    Kipfer, R.2    Hofer, M.3    Imboden, D.M.4    Wieler, R.5    Signer, P.6
  • 3
    • 39149118031 scopus 로고    scopus 로고
    • Mesophilic crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota
    • Brochier-Armanet C, Boussau B, Gribaldo S & Forterre P (2008) Mesophilic crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota. Nat Rev Microbiol 6: 245-252.
    • (2008) Nat Rev Microbiol , vol.6 , pp. 245-252
    • Brochier-Armanet, C.1    Boussau, B.2    Gribaldo, S.3    Forterre, P.4
  • 4
    • 0031839789 scopus 로고    scopus 로고
    • Organic carbon partitioning during spring phytoplankton blooms in the Ross Sea polynya and the Sargasso Sea
    • Carlson CA, Ducklow HW, Hansell DA & Smith WO (1998) Organic carbon partitioning during spring phytoplankton blooms in the Ross Sea polynya and the Sargasso Sea. Limnol Oceanogr 43: 375-386.
    • (1998) Limnol Oceanogr , vol.43 , pp. 375-386
    • Carlson, C.A.1    Ducklow, H.W.2    Hansell, D.A.3    Smith, W.O.4
  • 6
    • 0021836170 scopus 로고
    • A quick method for the determination of dissolved and precipitated sulfides in cultures of sulfate-reducing bacteria
    • Cord-Ruwisch R (1985) A quick method for the determination of dissolved and precipitated sulfides in cultures of sulfate-reducing bacteria. J Microbiol Methods 4: 33-36.
    • (1985) J Microbiol Methods , vol.4 , pp. 33-36
    • Cord-Ruwisch, R.1
  • 7
    • 0024259139 scopus 로고
    • The lipids of archaebacteria
    • De Rosa M & Gambacorta A (1988) The lipids of archaebacteria. Prog Lipid Res 27: 153-175.
    • (1988) Prog Lipid Res , vol.27 , pp. 153-175
    • De Rosa, M.1    Gambacorta, A.2
  • 10
    • 34250088572 scopus 로고
    • Microenvironments of soil microorganisms
    • Foster RC (1988) Microenvironments of soil microorganisms. Biol Fertil Soils 6: 189-203.
    • (1988) Biol Fertil Soils , vol.6 , pp. 189-203
    • Foster, R.C.1
  • 11
    • 78049277482 scopus 로고    scopus 로고
    • Archaea rather than bacteria control nitrification in two agricultural acidic soils
    • Gubry-Rangin C, Nicol GW & Prosser JI (2010) Archaea rather than bacteria control nitrification in two agricultural acidic soils. FEMS Microbiol Ecol 74: 566-574.
    • (2010) FEMS Microbiol Ecol , vol.74 , pp. 566-574
    • Gubry-Rangin, C.1    Nicol, G.W.2    Prosser, J.I.3
  • 12
    • 73449128271 scopus 로고    scopus 로고
    • Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data
    • Hamady M, Lozupone C & Knight R (2009) Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data. ISME J 4: 17-27.
    • (2009) ISME J , vol.4 , pp. 17-27
    • Hamady, M.1    Lozupone, C.2    Knight, R.3
  • 13
    • 70349553629 scopus 로고    scopus 로고
    • Carbon capture and storage: how green can black be?
    • Haszeldine RS (2009) Carbon capture and storage: how green can black be? Science 325: 1647-1652.
    • (2009) Science , vol.325 , pp. 1647-1652
    • Haszeldine, R.S.1
  • 14
    • 36849085899 scopus 로고    scopus 로고
    • Subsurface clade of Geobacteraceae that predominates in a diversity of Fe(III)-reducing subsurface environments
    • Holmes DE, O'Neil RA, Vrionis HA et al. (2007) Subsurface clade of Geobacteraceae that predominates in a diversity of Fe(III)-reducing subsurface environments. ISME J 1: 663-677.
    • (2007) ISME J , vol.1 , pp. 663-677
    • Holmes, D.E.1    O'Neil, R.A.2    Vrionis, H.A.3
  • 15
    • 36549072572 scopus 로고    scopus 로고
    • The Physical Science Basis
    • IPCC (2007) (Solomon S, Qin D, Manning M, Chen Z, Marquis M, Averyt KB, Tignor M & Miller HL, eds) Cambridge University Press, Cambridge, UK, New York, NY.
    • IPCC (2007) The Physical Science Basis. Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change (Solomon S, Qin D, Manning M, Chen Z, Marquis M, Averyt KB, Tignor M & Miller HL, eds), pp. 996. Cambridge University Press, Cambridge, UK, New York, NY.
    • Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change , pp. 996
  • 17
    • 0030894624 scopus 로고    scopus 로고
    • Novel group within the kingdom Crenarchaeota from boreal forest soil
    • Jurgens G, Lindstrom K & Saano A (1997) Novel group within the kingdom Crenarchaeota from boreal forest soil. Appl Environ Microbiol 63: 803-805.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 803-805
    • Jurgens, G.1    Lindstrom, K.2    Saano, A.3
  • 18
    • 34249106390 scopus 로고    scopus 로고
    • High abundance of Crenarchaeota in a temperate acidic forest soil
    • Kemnitz D, Kolb S & Conrad R (2007) High abundance of Crenarchaeota in a temperate acidic forest soil. FEMS Microbiol Ecol 60: 442-448.
    • (2007) FEMS Microbiol Ecol , vol.60 , pp. 442-448
    • Kemnitz, D.1    Kolb, S.2    Conrad, R.3
  • 20
    • 0028993640 scopus 로고
    • The temperature dependence of soil organic matter decomposition, and the effect of global warming on soil organic C storage
    • Kirschbaum MUF (1995) The temperature dependence of soil organic matter decomposition, and the effect of global warming on soil organic C storage. Soil Biol Biochem 27: 753-760.
    • (1995) Soil Biol Biochem , vol.27 , pp. 753-760
    • Kirschbaum, M.U.F.1
  • 21
    • 0036113246 scopus 로고    scopus 로고
    • 4 oxidation in rice fields determined by stable carbon isotopes and specific inhibitors
    • 4 oxidation in rice fields determined by stable carbon isotopes and specific inhibitors. Glob Change Biol 8: 265-280.
    • (2002) Glob Change Biol , vol.8 , pp. 265-280
    • Krüger, M.1    Eller, G.2    Conrad, R.3    Frenzel, P.4
  • 22
    • 80051471757 scopus 로고    scopus 로고
    • Effects of elevated CO2 concentrations on the vegetation and microbial populations at a terrestrial CO2 vent at Laacher See, Germany
    • Krüger M, Jones D, Frerichs J et al. (2011) Effects of elevated CO2 concentrations on the vegetation and microbial populations at a terrestrial CO2 vent at Laacher See, Germany. Int J Green Gas Con 5: 1093-1098.
    • (2011) Int J Green Gas Con , vol.5 , pp. 1093-1098
    • Krüger, M.1    Jones, D.2    Frerichs, J.3
  • 23
    • 2542523843 scopus 로고    scopus 로고
    • ARB: a software environment for sequence data
    • Ludwig W, Strunk O, Westram R et al. (2004) ARB: a software environment for sequence data. Nucleic Acids Res 32: 1363-1371.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1363-1371
    • Ludwig, W.1    Strunk, O.2    Westram, R.3
  • 24
    • 20444421893 scopus 로고    scopus 로고
    • Root respiration response to high CO2 concentrations in plants from natural CO2 springs
    • Macek I, Pfanz H, Francetic V, Batic F & Vodnik D (2005) Root respiration response to high CO2 concentrations in plants from natural CO2 springs. Environ Exp Bot 54: 90-99.
    • (2005) Environ Exp Bot , vol.54 , pp. 90-99
    • Macek, I.1    Pfanz, H.2    Francetic, V.3    Batic, F.4    Vodnik, D.5
  • 25
    • 0036045379 scopus 로고    scopus 로고
    • In vitro demonstration of anaerobic oxidation of methane coupled to sulphate reduction in sediment from a marine gas hydrate area
    • Nauhaus K, Boetius A, Krüger M & Widdel F (2002) In vitro demonstration of anaerobic oxidation of methane coupled to sulphate reduction in sediment from a marine gas hydrate area. Environ Microbiol 4: 296-305.
    • (2002) Environ Microbiol , vol.4 , pp. 296-305
    • Nauhaus, K.1    Boetius, A.2    Krüger, M.3    Widdel, F.4
  • 26
    • 52949137846 scopus 로고    scopus 로고
    • The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria
    • Nicol GW, Leininger S, Schleper C & Prosser JI (2008) The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria. Environ Microbiol 10: 2966-2978.
    • (2008) Environ Microbiol , vol.10 , pp. 2966-2978
    • Nicol, G.W.1    Leininger, S.2    Schleper, C.3    Prosser, J.I.4
  • 28
    • 79959289950 scopus 로고    scopus 로고
    • The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology
    • Pester M, Schleper C & Wagner M (2011) The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology. Curr Opin Microbiol 14: 300-306.
    • (2011) Curr Opin Microbiol , vol.14 , pp. 300-306
    • Pester, M.1    Schleper, C.2    Wagner, M.3
  • 29
    • 34548262724 scopus 로고    scopus 로고
    • Photosynthetic performance (CO2-compensation point, carboxylation efficiency, and net photosynthesis) of timothy grass (Phleum pratense L.) is affected by elevated carbon dioxide in post-volcanic mofette areas
    • Pfanz H, Vodnik D, Wittmann C, Aschan G, Batic F, Turk B & Macek I (2007) Photosynthetic performance (CO2-compensation point, carboxylation efficiency, and net photosynthesis) of timothy grass (Phleum pratense L.) is affected by elevated carbon dioxide in post-volcanic mofette areas. Environ Exp Bot 61: 41-48.
    • (2007) Environ Exp Bot , vol.61 , pp. 41-48
    • Pfanz, H.1    Vodnik, D.2    Wittmann, C.3    Aschan, G.4    Batic, F.5    Turk, B.6    Macek, I.7
  • 30
    • 71249092511 scopus 로고    scopus 로고
    • 2 emissions on plant and microbial communities
    • 2 emissions on plant and microbial communities. Plant Soil 325: 197-205.
    • (2009) Plant Soil , vol.325 , pp. 197-205
    • Pierce, S.1    Sjögersten, S.2
  • 31
    • 37549027613 scopus 로고    scopus 로고
    • SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
    • Pruesse E, Quast C, Knittel K, Fuchs BM, Ludwig W, Peplies J & Gloeckner FO (2007) SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res 35: 7188-7196.
    • (2007) Nucleic Acids Res , vol.35 , pp. 7188-7196
    • Pruesse, E.1    Quast, C.2    Knittel, K.3    Fuchs, B.M.4    Ludwig, W.5    Peplies, J.6    Gloeckner, F.O.7
  • 32
    • 80053631233 scopus 로고    scopus 로고
    • Assessing the health risks of natural CO2 seeps in Italy
    • Roberts JJ, Wood RA & Haszeldine RS (2011) Assessing the health risks of natural CO2 seeps in Italy. P Natl Acad Sci USA 108: 16545-16548.
    • (2011) P Natl Acad Sci USA , vol.108 , pp. 16545-16548
    • Roberts, J.J.1    Wood, R.A.2    Haszeldine, R.S.3
  • 36
    • 0022225621 scopus 로고
    • The distinctive properties of andosols
    • Wada K (1985) The distinctive properties of andosols. Adv Soil Sci 2: 173-229.
    • (1985) Adv Soil Sci , vol.2 , pp. 173-229
    • Wada, K.1
  • 37
    • 0142091782 scopus 로고    scopus 로고
    • Assessment of bacterial community structure in the deep sub-seafloor biosphere by 16S rDNA-based techniques: a cautionary tale
    • Webster G, Newberry CJ, Fry JC & Weightman AJ (2003) Assessment of bacterial community structure in the deep sub-seafloor biosphere by 16S rDNA-based techniques: a cautionary tale. J Microbiol Methods 55: 155-164.
    • (2003) J Microbiol Methods , vol.55 , pp. 155-164
    • Webster, G.1    Newberry, C.J.2    Fry, J.C.3    Weightman, A.J.4


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