Development of bacteriostatic DNA aptamers for salmonella

Journal of Medicinal Chemistry

Volumn 56, Issue 4, 2013, Pages 1564-1572

  Kolovskaya, Olga S ^a   Savitskaya, Anna G ^a   Zamay, Tatiana N ^a   Reshetneva, Irina T ^a   Zamay, Galina S ^a   Erkaev, Evgeny N ^a   Wang, Xiaoyan ^b   Wehbe, Mohamed ^b   Salmina, Alla B ^a   Perianova, Olga V ^a   Zubkova, Olga A ^a   Spivak, Ekaterina A ^a   Mezko, Vasily S ^a   Glazyrin, Yury E ^a   Titova, Nadezhda M ^c   Berezovski, Maxim V ^b   Zamay, Anna S ^a  

^a KRASNOYARSK STATE MEDICAL UNIVERSITY   (Russian Federation)

^b UNIVERSITY OF OTTAWA   (Canada)

^c SIBERIAN FEDERAL UNIVERSITY   (Russian Federation)

Author keywords

[No Author keywords available]

Indexed keywords

AMIKACIN; AMPICILLIN; ANTIBIOTIC AGENT; APTAMER; BACTERIAL DNA; CHLORAMPHENICOL; STREPTOMYCIN; TETRACYCLINE;

ANTIBACTERIAL ACTIVITY; ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIAL GROWTH; BACTERICIDAL ACTIVITY; BACTERIOSTASIS; BACTERIUM CULTURE; CELL MEMBRANE DEPOLARIZATION; DISSOCIATION CONSTANT; DNA SEQUENCE; DRUG BINDING SITE; DRUG DNA BINDING; HUMAN; MEMBRANE POTENTIAL; NONHUMAN; SALMONELLA ENTERITIDIS; SALMONELLA TYPHIMURIUM; SEROTYPE;

EID: 84874631974     PISSN: 00222623     EISSN: 15204804     Source Type: Journal    
DOI: 10.1021/jm301856j     Document Type: Article

References (26)

1. Pegues, D. A.; Ohl, M. E.; Miller, S. I. Salmonella species, including Salmonella typhi. In Principles and Practice of Infectious Diseases, 6 th ed.; Mandell, G. L., Bennet, J. E., Dolin, R., Eds.; Churchill Livingstone: Elsevier: New York, 2005; pp 2636-2654.
2. Helms, M.; Ethelberg, S.; Molbak, K. International Salmonella typhimurium DT104 infections, 1992-2001 Emerging Infect. Dis. 2005, 11, 859-867 (Pubitemid 40720846)
3. Pui, C. F.; Wong, W. C.; Chai, L. C.; Tunung, R.; Jeyaletchumi, P.; Noor Hidayah, M. S.; Ubong, A.; Farinazleen, M. G.; Cheah, Y. K.; Son, R. Salmonella: A foodborne pathogen Int. Food Res. J. 2011, 18, 465-473
4. Schlesinger, S. R.; Lahousse, M. J.; Foster, T. O.; Kim, S.-K. Metallo-β-lactamases and aptamer-based inhibition Pharmaceuticals 2011, 4, 419-428
5. Vivekananda, J.; Keil, J. L. US20036569630, 2003.
6. Xiaolian, Z.; Fan, C. CN101109013, 2008.
7. Morrissey, D.; Haeberli, P. WO03106476, 2003.
8. Ellington, A.; Szostak, J. In vitro selection of RNA molecules that bind specific ligands Nature 1990, 346, 818-822
9. Tuerk, C.; Gold, L. Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase Science 1990, 249, 505-510
10. Berezovski, M. V.; Lechmann, M.; Musheev, M. U.; Mak, T. W.; Krylov, S. N. Aptamer-facilitated biomarker discovery (AptaBiD) J. Am. Chem. Soc. 2008, 130, 9137-9143 (Pubitemid 352000854)
11. Shangguan, D.; Meng, L.; Cao, Z. C.; Xiao, Z.; Fang, X.; Li, Y.; Cardona, D.; Witek, R. P.; Liu, C.; Tan, W. Identification of liver cancer-specific aptamers using whole live cells Anal. Chem. 2008, 80, 721-728 (Pubitemid 351206860)
12. Javaherian, S.; Musheev, M. U.; Kanoatov, M.; Berezovski, M. V.; Krylov, S. N. Selection of aptamers for a protein target in cell lysate and their application to protein purification Nucleic Acids Res. 2009, 37 (8) e62
13. Labib, M.; Zamay, A. S.; Muharemagic, D.; Chechik, A.; Bell, J. C.; Berezovski, M. V. electrochemical sensing of aptamer-facilitated virus immunoshielding Anal. Chem. 2012, 84, 1677-1686
14. Labib, M.; Zamay, A. S.; Muharemagic, D.; Chechik, A.; Bell, J. C.; Berezovski, M. V. Aptamer-based viability impedimetric sensor for viruses Anal. Chem. 2012, 84, 1813-1816
15. Labib, M.; Zamay, A. S.; Muharemagic, D.; Chechik, A.; Bell, J. C.; Berezovski, M. V. Electrochemical differentiation of epitope-specific aptamers Anal. Chem. 2012, 84, 2548-2556
16. Ulrich, H. RNA aptamers: from basic science towards therapy Handb. Exp. Pharmacol. 2006, 173, 305-326
17. Vavvas, D.; D'Amico, D. J. Pegaptanib (Macugen): treating neovascular age-related macular degeneration and current role in clinical practice Ophthalmol. Clin. North. Am. 2006, 19, 353-360 (Pubitemid 44403945)
18. Keefe, A. D.; Pai, S.; Ellington, A. Aptamers as therapeutics Nat. Rev. Drug Discovery 2012, 9, 538-550
19. Hamula, C. L. A.; Zhang, H.; Guan, L. L.; Li, X.-F.; Le, X. C. Selection of aptamers against live bacterial cells Anal. Chem. 2008, 80 (20) 7812-7819
20. Hamula, C. L. A.; Le, X. C.; Li, X.-F. DNA Aptamers binding to multiple prevalent M-types of streptococcus pyogenes Anal. Chem. 2011, 83 (10) 3640-3647
21. Joshi, R.; Janagama, H.; Dwivedi, H. P.; Kumar, S. T. M. A.; Jaykus, L.-A.; Schefers, J.; Sreevatsan, S. Selection, characterization, and application of DNA aptamers for the capture and detection of Salmonella enterica serovars Mol. Cell. Probes 2009, 23, 20-28
22. Fubin, Wang; Ming-Sheng, Zhang; Jian-Ming, Hu; Bing Xia Qin, Pan; Xiao-Lian, Zhang; Hong-Yan, Wu; Pan-Wen, He; Jianguo, Wu. Aptamers that preferentially bind type IVB pili and inhibit human monocytic-cell invasion by Salmonella enterica serovar typhi Antimicrob. Agents Chemother. 2005, 49 (10) 4052-4060
23. Sefah, K.; Shangguan, D.; Xiong, X.; O'Donoghue, M. B.; Tan, W. Development of DNA aptamers using Cell-SELEX Nat. Protoc. 2010, 5, 1169-1185
24. Miles, A. A.; Misra, S. S.; Irwin, J. O. The estimation of the bactericidal power of the blood J. Hyg. 1938, 38 (6) 732-749
25. Lopez-Amoros, R.; Comas, J.; Vives-Rego, J. Flow cytometric assessment of Escherichia coli and Salmonella typhimurium starvation-survival in seawater using rhodamine 123, propidium iodide, and oxonol Appl. Environ. Microbiol. 1995, 61 (7) 2521-2526
26. Kennedy, D.; Cronin, U. P.; Wilkinson, M. G. Responses of Escherichia coli, Listeria monocytogenes, and Staphylococcus aureus to simulated food processing treatments, determined using Fluorescence-Activated Cell Sorting and plate counting Appl. Environ. Microbiol. 2011, 77 (13) 4657-4668