메뉴 건너뛰기




Volumn 58, Issue 2, 2013, Pages 79-90

Ribosomal protein SA and its pseudogenes in ruminants: An extremely conserved gene family

Author keywords

37 DA laminin receptor precursor 67 DA laminin receptor; Laminin receptor; Mutation detection; Polymorphism; Prion; RPSA; Sequence conservation

Indexed keywords


EID: 84874608066     PISSN: 12121819     EISSN: None     Source Type: Journal    
DOI: 10.17221/6618-cjas     Document Type: Article
Times cited : (3)

References (44)
  • 5
    • 67649933366 scopus 로고    scopus 로고
    • Eukaryotic snoRNAs: A paradigm for gene expression flexibility
    • Dieci G., Preti M., Montanini B. (2009): Eukaryotic snoRNAs: a paradigm for gene expression flexibility. Genomics, 94, 83-88.
    • (2009) Genomics , vol.94 , pp. 83-88
    • Dieci, G.1    Preti, M.2    Montanini, B.3
  • 6
    • 0034777594 scopus 로고    scopus 로고
    • Detection of cis-element clusters in higher eukaryotic DNA
    • Frith M.C., Hansen U., Weng Z. (2001): Detection of cis-element clusters in higher eukaryotic DNA. Bioinformatics, 17, 878-889. (Pubitemid 32998624)
    • (2001) Bioinformatics , vol.17 , Issue.10 , pp. 878-889
    • Frith, M.C.1    Hansen, U.2    Weng, Z.3
  • 7
    • 0030711050 scopus 로고    scopus 로고
    • Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs
    • Ganot P., Bortolin M.L., Kiss T. (1997): Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs. Cell, 89, 799-809. (Pubitemid 27516183)
    • (1997) Cell , vol.89 , Issue.5 , pp. 799-809
    • Ganot, P.1    Bortolin, M.-L.2    Kiss, T.3
  • 12
    • 34250002786 scopus 로고    scopus 로고
    • Scrapie-Uncertainties, biology and molecular approaches
    • DOI 10.1016/j.bbadis.2007.04.007, PII S0925443907001068, Prion-Related Disorders
    • Hunter N. (2007): Scrapie: uncertainties, biology and molecular approaches. Biochimica et Biophysica Acta, 1772, 619-628. (Pubitemid 46881282)
    • (2007) Biochimica et Biophysica Acta - Molecular Basis of Disease , vol.1772 , Issue.6 , pp. 619-628
    • Hunter, N.1
  • 15
    • 2942718696 scopus 로고    scopus 로고
    • Human box H/ACA pseudouridylation guide RNA machinery
    • DOI 10.1128/MCB.24.13.5797-5807.2004
    • Kiss A.M., Jady B.E., Bertrand E., Kiss T. (2004): Human box H/ACA pseudouridylation guide RNA machinery. Molecular and Cellular Biology, 24, 5797-5807. (Pubitemid 38787965)
    • (2004) Molecular and Cellular Biology , vol.24 , Issue.13 , pp. 5797-5807
    • Kiss, A.M.1    Jady, B.E.2    Bertrand, E.3    Kiss, T.4
  • 16
    • 34247576129 scopus 로고    scopus 로고
    • Characterization of the porcine multicopy ribosomal protein SA/37-kDa laminin receptor gene family
    • DOI 10.1016/j.gene.2007.02.022, PII S0378111907001102
    • Knorr C., Beuermann C., Beck J., Brenig B. (2007): Characterization of the porcine multicopy ribosomal protein SA/37-κDa laminin receptor gene family. Gene, 395, 135-143. (Pubitemid 46670642)
    • (2007) Gene , vol.395 , Issue.1-2 , pp. 135-143
    • Knorr, C.1    Beuermann, C.2    Beck, J.3    Brenig, B.4
  • 17
    • 33846588874 scopus 로고    scopus 로고
    • SNPs, silent but not invisible
    • DOI 10.1126/science.1138239
    • Komar A.A. (2007): Genetics. SNPs, silent but not invisible. Science, 315, 466-467. (Pubitemid 46178389)
    • (2007) Science , vol.315 , Issue.5811 , pp. 466-467
    • Komar, A.A.1
  • 18
    • 78651293534 scopus 로고    scopus 로고
    • Mirbase: Integrating microRNA annotation and deep-sequencing data
    • Kozomara A., Griffiths-Jones S. (2011): miRBase: integrating microRNA annotation and deep-sequencing data. Nucleic Acids Research, 39, D152-D157.
    • (2011) Nucleic Acids Research , vol.39
    • Kozomara, A.1    Griffiths-Jones, S.2
  • 20
    • 0242585507 scopus 로고    scopus 로고
    • Sc propagation in scrapie-infected neuronal cells
    • DOI 10.1038/sj.embor.embor768
    • Leucht C., Simoneau S., Rey C., Vana K., Rieger R., Lasmezas C.I., Weiss S. (2003): The 37 κDa/67 κDa laminin receptor is required for PrP(Sc) propagation in scrapie-infected neuronal cells. EMBO Reports, 4, 290-295. (Pubitemid 36511726)
    • (2003) EMBO Reports , vol.4 , Issue.3 , pp. 290-295
    • Leucht, C.1    Simoneau, S.2    Rey, C.3    Vana, K.4    Rieger, R.5    Lasmezas, C.I.6    Weiss, S.7
  • 21
    • 1542436348 scopus 로고    scopus 로고
    • Knock-down of the 37-kDa/67-kDa laminin receptor in mouse brain by transgenic expression of specific antisense LRP RNA
    • DOI 10.1023/B:TRAG.0000017177.35197.89
    • Leucht C., Vana K., Renner-Muller I., Dormont D., Lasmezas C.I., Wolf E., Weiss S. (2004): Knock-down of the 37-κDa/67-κDa laminin receptor in mouse brain by transgenic expression of specific antisense LRP RNA. Transgenic Research, 13, 81-85. (Pubitemid 38335393)
    • (2004) Transgenic Research , vol.13 , Issue.1 , pp. 81-85
    • Leucht, C.1    Vana, K.2    Renner-Muller, I.3    Dormont, D.4    Lasmezas, C.I.5    Wolf, E.6    Weiss, S.7
  • 24
    • 11444271002 scopus 로고    scopus 로고
    • Polymorphisms at codons 141 and 154 in the ovine prion protein gene are associated with scrapie Nor98 cases
    • DOI 10.1099/vir.0.80437-0
    • Moum T., Olsaker I., Hopp P., Moldal T., Valheim M., Bene-stad S.L. (2005): Polymorphisms at codons 141 and 154 in the ovine prion protein gene are associated with scrapie Nor98 cases. Journal of General Virology, 86, 231-235. (Pubitemid 40081170)
    • (2005) Journal of General Virology , vol.86 , Issue.1 , pp. 231-235
    • Moum, T.1    Olsaker, I.2    Hopp, P.3    Moldal, T.4    Valheim, M.5    Moum, T.6    Benestad, S.L.7
  • 26
    • 0030771087 scopus 로고    scopus 로고
    • Small nucleolar RNAs direct site-specific synthesis of pseudouridine in ribosomal RNA
    • Ni J., Tien A.L., Fournier M.J. (1997): Small nucleolar RNAs direct site-specific synthesis of pseudouridine in ribosomal RNA. Cell, 89, 565-573. (Pubitemid 27511767)
    • (1997) Cell , vol.89 , Issue.4 , pp. 565-573
    • Ni, J.1    Tien, A.L.2    Fournier, M.J.3
  • 28
    • 0025831356 scopus 로고
    • SIGNAL SCAN: A computer program that scans DNA sequences for eukaryotic transcriptional elements
    • Prestridge D.S. (1991): SIGNAL SCAN: a computer program that scans DNA sequences for eukaryotic transcriptional elements. Computer Applications in the Biosciences, 7, 203-206.
    • (1991) Computer Applications in the Biosciences , vol.7 , pp. 203-206
    • Prestridge, D.S.1
  • 29
    • 70350323692 scopus 로고    scopus 로고
    • Cloning and characterization of full-length coding sequence (CDS) of the ovine 37/67-κDa laminin receptor (RPSA)
    • Qiao J., Su X., Wang Y., Yang J., Kouadir M., Zhou X., Yin X., Zhao D. (2009): Cloning and characterization of full-length coding sequence (CDS) of the ovine 37/67-κDa laminin receptor (RPSA). Molecular Biology Reports, 36, 2131-2137.
    • (2009) Molecular Biology Reports , vol.36 , pp. 2131-2137
    • Qiao, J.1    Su, X.2    Wang, Y.3    Yang, J.4    Kouadir, M.5    Zhou, X.6    Yin, X.7    Zhao, D.8
  • 30
    • 0034740227 scopus 로고    scopus 로고
    • Application of a time-delay neural network to promoter annotation in the Drosophila melanogaster genome
    • DOI 10.1016/S0097-8485(01)00099-7, PII S0097848501000997
    • Reese M.G. (2001): Application of a time-delay neural network to promoter annotation in the Drosophila melanogaster genome. Computers and Chemistry, 26, 51-56. (Pubitemid 33034559)
    • (2001) Computers and Chemistry , vol.26 , Issue.1 , pp. 51-56
    • Reese, M.G.1
  • 31
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on the WWW for general users and for biologist programmers
    • Rozen S., Skaletsky H. (2000): Primer3 on the WWW for general users and for biologist programmers. Methods in Molecular Biology, 132, 365-386.
    • (2000) Methods in Molecular Biology , vol.132 , pp. 365-386
    • Rozen, S.1    Skaletsky, H.2
  • 33
    • 78650414544 scopus 로고    scopus 로고
    • Extraribosomal functions associated with the C terminus of the 37/67 kDa laminin receptor are required for maintaining cell viability
    • accessed Oct 22, 2011
    • Scheiman J., Jamieson K.V., Ziello J., Tseng J.C., Meruelo D. (2010): Extraribosomal functions associated with the C terminus of the 37/67 kDa laminin receptor are required for maintaining cell viability. Cell Death and Disease [serial online]. 1, e42. Available from http://www.nature.com/cddis/journal/v1/ n5/full/cddis201019a.html (accessed Oct 22, 2011).
    • (2010) Cell Death and Disease [Serial Online] , vol.1
    • Scheiman, J.1    Jamieson, K.V.2    Ziello, J.3    Tseng, J.C.4    Meruelo, D.5
  • 34
    • 0023046874 scopus 로고
    • Codon usage in yeast: Cluster analysis clearly differentiates highly and lowly expressed genes
    • Sharp P.M., Tuohy T.M., Mosurski K.R. (1986): Codon usage in yeast: cluster analysis clearly differentiates highly and lowly expressed genes. Nucleic Acids Research, 14, 5125-5143.
    • (1986) Nucleic Acids Research , vol.14 , pp. 5125-5143
    • Sharp, P.M.1    Tuohy, T.M.2    Mosurski, K.R.3
  • 35
    • 67650657838 scopus 로고    scopus 로고
    • Definition, conservation and epigenetics of housekeeping and tissue-enriched genes
    • accessed Sept 10, 2010
    • She X., Rohl C.A., Castle J.C., Kulkarni A.V., Johnson J.M., Chen R. (2009): Definition, conservation and epigenetics of housekeeping and tissue-enriched genes. BMC Genomics [serial online]. 10, 269. Available from http://www.biomedcentral.com/1471-2164/10/269 (accessed Sept 10, 2010).
    • (2009) BMC Genomics [Serial Online] , vol.10 , pp. 269
    • She, X.1    Rohl, C.A.2    Castle, J.C.3    Kulkarni, A.V.4    Johnson, J.M.5    Chen, R.6
  • 36
    • 77951621301 scopus 로고    scopus 로고
    • The genome sequence of taurine cattle: A window to ruminant biology and evolution
    • The Bovine Genome Sequencing and Analysis Consortium
    • The Bovine Genome Sequencing and Analysis Consortium, Elsik C.G., Tellam R.L., Worley K.C. (2009): The genome sequence of taurine cattle: a window to ruminant biology and evolution. Science, 324, 522-528.
    • (2009) Science , vol.324 , pp. 522-528
    • Elsik, C.G.1    Tellam, R.L.2    Worley, K.C.3
  • 39
    • 80051585052 scopus 로고    scopus 로고
    • The first report of RPSA polymorphisms, also called 37/67 kDa LRP/LR gene, in sporadic Creutzfeldt- Jakob disease (CJD)
    • accessed Sept 20, 2011
    • Yun J., Jin H.T., Lee Y.J., Choi E.K., Carp R.I., Jeong B.H., Kim Y.S. (2011): The first report of RPSA polymorphisms, also called 37/67 kDa LRP/LR gene, in sporadic Creutzfeldt- Jakob disease (CJD). BMC Medical Genetics [serial online]. 12, 108. Available from http://www.biomedcentral. com/1471-2350/12/108 (accessed Sept 20, 2011).
    • (2011) BMC Medical Genetics [Serial Online] , vol.12 , pp. 108
    • Yun, J.1    Jin, H.T.2    Lee, Y.J.3    Choi, E.K.4    Carp, R.I.5    Jeong, B.H.6    Kim, Y.S.7
  • 40
    • 1542286776 scopus 로고    scopus 로고
    • Mammalian Housekeeping Genes Evolve More Slowly than Tissue-Specific Genes
    • DOI 10.1093/molbev/msh010
    • Zhang L., Li W.H. (2004): Mammalian housekeeping genes evolve more slowly than tissue-specific genes. Molecular Biology and Evolution, 21, 236-239. (Pubitemid 38314611)
    • (2004) Molecular Biology and Evolution , vol.21 , Issue.2 , pp. 236-239
    • Zhang, L.1    Li, W.-H.2
  • 41
    • 0036796620 scopus 로고    scopus 로고
    • Identification and analysis of over 2000 ribosomal protein pseudogenes in the human genome
    • DOI 10.1101/gr.331902
    • Zhang Z., Harrison P., Gerstein M. (2002): Identification and analysis of over 2000 ribosomal protein pseudogenes in the human genome. Genome Research, 12, 1466-1482. (Pubitemid 35189531)
    • (2002) Genome Research , vol.12 , Issue.10 , pp. 1466-1482
    • Zhang, Z.1    Harrison, P.2    Gerstein, M.3
  • 42
    • 1642473033 scopus 로고    scopus 로고
    • Comparative analysis of processed pseudogenes in the mouse and human genomes
    • DOI 10.1016/j.tig.2003.12.005
    • Zhang Z., Carriero N., Gerstein M. (2004): Comparative analysis of processed pseudogenes in the mouse and human genomes. Trends in Genetics, 20, 62-67. (Pubitemid 38121355)
    • (2004) Trends in Genetics , vol.20 , Issue.2 , pp. 62-67
    • Zhang, Z.1    Carriero, N.2    Gerstein, M.3
  • 43
    • 38349110922 scopus 로고    scopus 로고
    • Analysis of nuclear receptor pseudogenes in vertebrates: How the silent tell their stories
    • Zhang Z.D., Cayting P., Weinstock G., Gerstein M. (2008): Analysis of nuclear receptor pseudogenes in vertebrates: how the silent tell their stories. Molecular Biology and Evolution, 25, 131-143.
    • (2008) Molecular Biology and Evolution , vol.25 , pp. 131-143
    • Zhang, Z.D.1    Cayting, P.2    Weinstock, G.3    Gerstein, M.4
  • 44
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • DOI 10.1093/nar/gkg595
    • Zuker M. (2003): Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Research, 31, 3406-3415. (Pubitemid 37442169)
    • (2003) Nucleic Acids Research , vol.31 , Issue.13 , pp. 3406-3415
    • Zuker, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.