메뉴 건너뛰기




Volumn 7803 LNAI, Issue PART 2, 2013, Pages 196-205

A descriptive method for generating siRNA design rules

Author keywords

Apriori algorithm; descriptive method; design rules; discriminative learning techniques; RNAi; siRNA

Indexed keywords

APRIORI ALGORITHMS; DESCRIPTIVE METHOD; DESIGN RULES; DISCRIMINATIVE LEARNING; RNAI; SIRNA;

EID: 84874597853     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-36543-0_21     Document Type: Conference Paper
Times cited : (1)

References (15)
  • 1
    • 0035863097 scopus 로고    scopus 로고
    • RNA interference is mediated by 21- and 22-nucleotide RNAs
    • Elbashir, S.M., Lendeckel, W., Tuschl, T.: RNA interference is mediated by 21- and 22-nucleotide RNAs. Genes Dev. 15, 188-200 (2001)
    • (2001) Genes Dev. , vol.15 , pp. 188-200
    • Elbashir, S.M.1    Lendeckel, W.2    Tuschl, T.3
  • 2
    • 0035803583 scopus 로고    scopus 로고
    • Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate
    • Elbashir, S.M., Martinez, J., Patkaniowska, A., Lendeckel, W., Tuschl, T.: Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate. EMBO J. 20, 6877-6888 (2001)
    • (2001) EMBO J. , vol.20 , pp. 6877-6888
    • Elbashir, S.M.1    Martinez, J.2    Patkaniowska, A.3    Lendeckel, W.4    Tuschl, T.5
  • 3
    • 0036351317 scopus 로고    scopus 로고
    • Analysis of gene function in somatic mammalian cells using small interfering RNAs
    • Elbashir, S.M., Harborth, J., Weber, K., Tuschl, T.: Analysis of gene function in somatic mammalian cells using small interfering RNAs. Methods 26, 199-213 (2002)
    • (2002) Methods , vol.26 , pp. 199-213
    • Elbashir, S.M.1    Harborth, J.2    Weber, K.3    Tuschl, T.4
  • 4
    • 0348014774 scopus 로고    scopus 로고
    • Approaches for the sequence-specific knockdown of mRNA
    • Scherer, L.J., Rossi, J.J.: Approaches for the sequence-specific knockdown of mRNA. Nat. Biotechnol. 21, 1457-1465 (2003)
    • (2003) Nat. Biotechnol. , vol.21 , pp. 1457-1465
    • Scherer, L.J.1    Rossi, J.J.2
  • 7
    • 1642273831 scopus 로고    scopus 로고
    • An algorithm for selection of functional siRNA sequences
    • Amarzguioui, M., Prydz, H.: An algorithm for selection of functional siRNA sequences. Biochem. Biophys. Res. Commun. 316(4), 1050-1058 (2004)
    • (2004) Biochem. Biophys. Res. Commun. , vol.316 , Issue.4 , pp. 1050-1058
    • Amarzguioui, M.1    Prydz, H.2
  • 8
    • 2342564353 scopus 로고    scopus 로고
    • A library of siRNA duplexes targeting the phosphoinositide 3-kinase pathway: Determinants of gene silencing for use in cell-based screens
    • Hsieh, A.C., Bo, R., Manola, J., Vazquez, F., Bare, O., Khvorova, A., Scaringe, S., Sellers, W.R.: A library of siRNA duplexes targeting the phosphoinositide 3-kinase pathway: determinants of gene silencing for use in cell-based screens. Nucleic Acids Res. 32(3), 893-901 (2004)
    • (2004) Nucleic Acids Res. , vol.32 , Issue.3 , pp. 893-901
    • Hsieh, A.C.1    Bo, R.2    Manola, J.3    Vazquez, F.4    Bare, O.5    Khvorova, A.6    Scaringe, S.7    Sellers, W.R.8
  • 11
    • 19444386649 scopus 로고    scopus 로고
    • Prediction of siRNA functionality using generalized string kernel and support vector machine
    • Teramoto, R., Aoki, M., Kimura, T., Kanaoka, M.: Prediction of siRNA functionality using generalized string kernel and support vector machine. FEBS Lett. 579, 2878-2882 (2005)
    • (2005) FEBS Lett. , vol.579 , pp. 2878-2882
    • Teramoto, R.1    Aoki, M.2    Kimura, T.3    Kanaoka, M.4
  • 12
    • 33846906687 scopus 로고    scopus 로고
    • More complete gene silencing by fewer siRNAs: Transparent optimized design and biophysical signature
    • Ladunga, I.: More complete gene silencing by fewer siRNAs: Transparent optimized design and biophysical signature. Nucleic Acids Res. 35, 433-440 (2007)
    • (2007) Nucleic Acids Res. , vol.35 , pp. 433-440
    • Ladunga, I.1
  • 14
    • 33747761923 scopus 로고    scopus 로고
    • On the art of identifying effective and specific siRNAs
    • Pei, Y., Tuschl, T.: On the art of identifying effective and specific siRNAs. Nat. Methods 3, 670-676 (2006)
    • (2006) Nat. Methods , vol.3 , pp. 670-676
    • Pei, Y.1    Tuschl, T.2
  • 15
    • 77649184817 scopus 로고    scopus 로고
    • Efficient prediction methods for selecting effective siRNA sequences
    • Takasaki, S.: Efficient prediction methods for selecting effective siRNA sequences. Comput. Biol. Med. 40, 149-158 (2010)
    • (2010) Comput. Biol. Med. , vol.40 , pp. 149-158
    • Takasaki, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.