-
1
-
-
38949170716
-
Prospects of HIV Env modification as an approach to HIV vaccine design
-
Hu, S. L., Stamatatos, L. (2007) Prospects of HIV Env modification as an approach to HIV vaccine design. Curr. HIV Res. 5, 507-513.
-
(2007)
Curr. HIV Res.
, vol.5
, pp. 507-513
-
-
Hu, S.L.1
Stamatatos, L.2
-
3
-
-
34249940652
-
Neutralizing antibody responses in acute human immunodeficiency virus type 1 subtype C infection
-
Gray, E. S., Moore, P. L., Choge, I. A., Decker, J. M., Bibollet-Ruche, F., Li, H., Leseka, N., Treurnicht, F., Mlisana, K., Shaw, G. M. (2007) Neutralizing antibody responses in acute human immunodeficiency virus type 1 subtype C infection. J. Virol. 81, 6187-6196.
-
(2007)
J. Virol.
, vol.81
, pp. 6187-6196
-
-
Gray, E.S.1
Moore, P.L.2
Choge, I.A.3
Decker, J.M.4
Bibollet-Ruche, F.5
Li, H.6
Leseka, N.7
Treurnicht, F.8
Mlisana, K.9
Shaw, G.M.10
-
4
-
-
84856482137
-
Vaccine protection against acquisition of neutralization-resistant SIV challenges in rhesus monkeys
-
Barouch, D. H., Liu, J., Li, H., Maxfield, L. F., Abbink, P., Lynch, D. M., Iampietro, M. J., SanMiguel, A., Seaman, M. S., Ferrari, G. (2012) Vaccine protection against acquisition of neutralization-resistant SIV challenges in rhesus monkeys. Nature 482, 89-93.
-
(2012)
Nature
, vol.482
, pp. 89-93
-
-
Barouch, D.H.1
Liu, J.2
Li, H.3
Maxfield, L.F.4
Abbink, P.5
Lynch, D.M.6
Iampietro, M.J.7
SanMiguel, A.8
Seaman, M.S.9
Ferrari, G.10
-
5
-
-
61949216736
-
Effector memory T cell responses are associated with protection of rhesus monkeys from mucosal simian immunodeficiency virus challenge
-
Hansen, S. G., Vieville, C., Whizin, N., Coyne-Johnson, L., Siess, D. C., Drummond, D. D., Legasse, A. W., Axthelm, M. K., Oswald, K., Trubey, C. M. (2009) Effector memory T cell responses are associated with protection of rhesus monkeys from mucosal simian immunodeficiency virus challenge. Nat. Med. 15, 293-299.
-
(2009)
Nat. Med.
, vol.15
, pp. 293-299
-
-
Hansen, S.G.1
Vieville, C.2
Whizin, N.3
Coyne-Johnson, L.4
Siess, D.C.5
Drummond, D.D.6
Legasse, A.W.7
Axthelm, M.K.8
Oswald, K.9
Trubey, C.M.10
-
6
-
-
0037122719
-
Replication-incompetent adenoviral vaccine vector elicits effective antiimmunodeficiency-virus immunity
-
Shiver, J. W., Fu, T. M., Chen, L., Casimiro, D. R., Davies, M. E., Evans, R. K., Zhang, Z. Q., Simon, A. J., Trigona, W. L., Dubey, S. A. (2002) Replication-incompetent adenoviral vaccine vector elicits effective antiimmunodeficiency-virus immunity. Nature 415, 331-335.
-
(2002)
Nature
, vol.415
, pp. 331-335
-
-
Shiver, J.W.1
Fu, T.M.2
Chen, L.3
Casimiro, D.R.4
Davies, M.E.5
Evans, R.K.6
Zhang, Z.Q.7
Simon, A.J.8
Trigona, W.L.9
Dubey, S.A.10
-
7
-
-
67449101823
-
Vaccine-induced cellular responses control simian immunodeficiency virus replication after heterologous challenge
-
Wilson, N. A., Keele, B. F., Reed, J. S., Piaskowski, S. M., MacNair, C. E., Bett, A. J., Liang, X., Wang, F., Thoryk, E., Heidecker, G. J. (2009) Vaccine-induced cellular responses control simian immunodeficiency virus replication after heterologous challenge. J. Virol. 83, 6508-6521.
-
(2009)
J. Virol.
, vol.83
, pp. 6508-6521
-
-
Wilson, N.A.1
Keele, B.F.2
Reed, J.S.3
Piaskowski, S.M.4
McNair, C.E.5
Bett, A.J.6
Liang, X.7
Wang, F.8
Thoryk, E.9
Heidecker, G.J.10
-
8
-
-
61849103667
-
Sustained suppression of SHIV89.6P replication in macaques by vaccine-induced CD8+ memory T cells
-
Yin, J., Dai, A., Kutzler, M. A., Shen, A., Lecureux, J., Lewis, M. G., Waldmann, T., Weiner, D. B., Boyer, J. D. (2008) Sustained suppression of SHIV89.6P replication in macaques by vaccine-induced CD8+ memory T cells. AIDS 22, 1739-1748.
-
(2008)
AIDS
, vol.22
, pp. 1739-1748
-
-
Yin, J.1
Dai, A.2
Kutzler, M.A.3
Shen, A.4
Lecureux, J.5
Lewis, M.G.6
Waldmann, T.7
Weiner, D.B.8
Boyer, J.D.9
-
9
-
-
56649105122
-
Efficacy assessment of a cell-mediated immunity HIV-1 vaccine (the Step Study): A double-blind, randomised, placebo-controlled, test-of-concept trial
-
Buchbinder, S. P., Mehrotra, D. V., Duerr, A., Fitzgerald, D. W., Mogg, R., Li, D., Gilbert, P. B., Lama, J. R., Marmor, M., Del Rio, C. (2008) Efficacy assessment of a cell-mediated immunity HIV-1 vaccine (the Step Study): a double-blind, randomised, placebo-controlled, test-of-concept trial. Lancet 372, 1881-1893.
-
(2008)
Lancet
, vol.372
, pp. 1881-1893
-
-
Buchbinder, S.P.1
Mehrotra, D.V.2
Duerr, A.3
Fitzgerald, D.W.4
Mogg, R.5
Li, D.6
Gilbert, P.B.7
Lama, J.R.8
Marmor, M.9
Del Rio, C.10
-
10
-
-
73349094086
-
Vaccination with ALVAC and AIDSVAX to prevent HIV-1 infection in Thailand
-
Rerks-Ngarm, S., Pitisuttithum, P., Nitayaphan, S., Kaewkungwal, J., Chiu, J., Paris, R., Premsri, N., Namwat, C., de Souza, M., Adams, E. (2009) Vaccination with ALVAC and AIDSVAX to prevent HIV-1 infection in Thailand. N. Engl. J. Med. 361, 2209-2220.
-
(2009)
N. Engl. J. Med.
, vol.361
, pp. 2209-2220
-
-
Rerks-Ngarm, S.1
Pitisuttithum, P.2
Nitayaphan, S.3
Kaewkungwal, J.4
Chiu, J.5
Paris, R.6
Premsri, N.7
Namwat, C.8
de Souza, M.9
Adams, E.10
-
11
-
-
0032146171
-
Protective immunity induced by live attenuated simian immunodeficiency virus
-
Johnson, R. P., Desrosiers, R. C. (1998) Protective immunity induced by live attenuated simian immunodeficiency virus. Curr. Opin. Immunol. 10, 436-443.
-
(1998)
Curr. Opin. Immunol.
, vol.10
, pp. 436-443
-
-
Johnson, R.P.1
Desrosiers, R.C.2
-
12
-
-
29244455769
-
Attenuation of simian immunodeficiency virus SIVmac239 infection by prophylactic immunization with DNA and recombinant adenoviral vaccine vectors expressing Gag
-
Casimiro, D. R., Wang, F., Schleif, W. A., Liang, X., Zhang, Z. Q., Tobery, T. W., Davies, M. E., McDermott, A. B., O'Connor, D. H., Fridman, A. (2005) Attenuation of simian immunodeficiency virus SIVmac239 infection by prophylactic immunization with DNA and recombinant adenoviral vaccine vectors expressing Gag. J. Virol. 79, 15547-15555.
-
(2005)
J. Virol.
, vol.79
, pp. 15547-15555
-
-
Casimiro, D.R.1
Wang, F.2
Schleif, W.A.3
Liang, X.4
Zhang, Z.Q.5
Tobery, T.W.6
Davies, M.E.7
McDermott, A.B.8
O'Connor, D.H.9
Fridman, A.10
-
13
-
-
79551653511
-
Vaccine-induced T cells provide partial protection against high-dose rectal SIVmac239 challenge of rhesus macaques
-
Lasaro, M. O., Haut, L. H., Zhou, X., Xiang, Z., Zhou, D., Li, Y., Giles-Davis, W., Li, H., Engram, J. C., Dimenna, L. J. (2011) Vaccine-induced T cells provide partial protection against high-dose rectal SIVmac239 challenge of rhesus macaques. Mol. Ther. 19, 417-426.
-
(2011)
Mol. Ther.
, vol.19
, pp. 417-426
-
-
Lasaro, M.O.1
Haut, L.H.2
Zhou, X.3
Xiang, Z.4
Zhou, D.5
Li, Y.6
Giles-Davis, W.7
Li, H.8
Engram, J.C.9
Dimenna, L.J.10
-
14
-
-
73649083403
-
Gene expression profiles in peripheral blood mononuclear cells can distinguish patients with non-small cell lung cancer from patients with nonmalignant lung disease
-
Showe, M. K., Vachani, A., Kossenkov, A. V., Yousef, M., Nichols, C., Nikonova, E. V., Chang, C., Kucharczuk, J., Tran, B., Wakeam, E. (2009) Gene expression profiles in peripheral blood mononuclear cells can distinguish patients with non-small cell lung cancer from patients with nonmalignant lung disease. Cancer Res. 69, 9202-9210.
-
(2009)
Cancer Res.
, vol.69
, pp. 9202-9210
-
-
Showe, M.K.1
Vachani, A.2
Kossenkov, A.V.3
Yousef, M.4
Nichols, C.5
Nikonova, E.V.6
Chang, C.7
Kucharczuk, J.8
Tran, B.9
Wakeam, E.10
-
15
-
-
77955801615
-
Galaxy: A comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
-
Goecks, J., Nekrutenko, A., Taylor, J. (2010) Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences. Genome Biol. 11, R86.
-
(2010)
Genome Biol.
, vol.11
-
-
Goecks, J.1
Nekrutenko, A.2
Taylor, J.3
-
16
-
-
65449136284
-
TopHat: Discovering splice junctions with RNA-Seq
-
Trapnell, C., Pachter, L., Salzberg, S. L. (2009) TopHat: discovering splice junctions with RNA-Seq. Bioinformatics 25, 1105-1111.
-
(2009)
Bioinformatics
, vol.25
, pp. 1105-1111
-
-
Trapnell, C.1
Pachter, L.2
Salzberg, S.L.3
-
17
-
-
77952123055
-
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
-
Trapnell, C., Williams, B. A., Pertea, G., Mortazavi, A., Kwan, G., van Baren, M. J., Salzberg, S. L., Wold, B. J., Pachter, L. (2010) Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. Nat. Biotechnol. 28, 511-515.
-
(2010)
Nat. Biotechnol.
, vol.28
, pp. 511-515
-
-
Trapnell, C.1
Williams, B.A.2
Pertea, G.3
Mortazavi, A.4
Kwan, G.5
van Baren, M.J.6
Salzberg, S.L.7
Wold, B.J.8
Pachter, L.9
-
18
-
-
0242287052
-
Statistical methods for identifying differentially expressed genes in DNA microarrays
-
Storey, J. D., Tibshirani, R. (2003) Statistical methods for identifying differentially expressed genes in DNA microarrays. Methods Mol. Biol. 224, 149-157.
-
(2003)
Methods Mol. Biol.
, vol.224
, pp. 149-157
-
-
Storey, J.D.1
Tibshirani, R.2
-
19
-
-
0032582688
-
Processing of an HIV replication intermediate by the human DNA replication enzyme FEN1
-
Rumbaugh, J. A., Fuentes, G. M., Bambara, R. A. (1998) Processing of an HIV replication intermediate by the human DNA replication enzyme FEN1. J. Biol. Chem. 273, 28740-28745.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 28740-28745
-
-
Rumbaugh, J.A.1
Fuentes, G.M.2
Bambara, R.A.3
-
20
-
-
79955423371
-
Duffy-nullassociated low neutrophil counts influence HIV-1 susceptibility in highrisk South African black women
-
Ramsuran, V., Kulkarni, H., He, W., Mlisana, K., Wright, E. J., Werner, L., Castiblanco, J., Dhanda, R., Le, T., Dolan, M. J. (2011) Duffy-nullassociated low neutrophil counts influence HIV-1 susceptibility in highrisk South African black women. Clin. Infect. Dis. 52, 1248-1256.
-
(2011)
Clin. Infect. Dis.
, vol.52
, pp. 1248-1256
-
-
Ramsuran, V.1
Kulkarni, H.2
He, W.3
Mlisana, K.4
Wright, E.J.5
Werner, L.6
Castiblanco, J.7
Dhanda, R.8
Le, T.9
Dolan, M.J.10
-
21
-
-
12144291130
-
Identification of Staufen in the human immunodeficiency virus type 1 Gag ribonucleoprotein complex and a role in generating infectious viral particles
-
Chatel-Chaix, L., Clement, J. F., Martel, C., Beriault, V., Gatignol, A., DesGroseillers, L., Mouland, A. J. (2004) Identification of Staufen in the human immunodeficiency virus type 1 Gag ribonucleoprotein complex and a role in generating infectious viral particles. Mol. Cell. Biol. 24, 2637-2648.
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 2637-2648
-
-
Chatel-Chaix, L.1
Clement, J.F.2
Martel, C.3
Beriault, V.4
Gatignol, A.5
DesGroseillers, L.6
Mouland, A.J.7
-
22
-
-
33747131064
-
A novel antioxidant N-acetylcysteine amide prevents gp120-and Tat-induced oxidative stress in brain endothelial cells
-
Price, T. O., Uras, F., Banks, W. A., Ercal, N. (2006) A novel antioxidant N-acetylcysteine amide prevents gp120-and Tat-induced oxidative stress in brain endothelial cells. Exp. Neurol. 201, 193-202.
-
(2006)
Exp. Neurol.
, vol.201
, pp. 193-202
-
-
Price, T.O.1
Uras, F.2
Banks, W.A.3
Ercal, N.4
-
23
-
-
33845427457
-
Nuclear export of simian immunodeficiency virus Vpx protein
-
Singhal, P. K., Rajendra Kumar, P., Subba Rao, M. R., Mahalingam, S. (2006) Nuclear export of simian immunodeficiency virus Vpx protein. J. Virol. 80, 12271-12282.
-
(2006)
J. Virol.
, vol.80
, pp. 12271-12282
-
-
Singhal, P.K.1
Rajendra Kumar, P.2
Subba Rao, M.R.3
Mahalingam, S.4
-
24
-
-
68049145094
-
Tetraspanins regulate cell-to-cell transmission of HIV-1
-
Krementsov, D. N., Weng, J., Lambele, M., Roy, N. H., Thali, M. (2009) Tetraspanins regulate cell-to-cell transmission of HIV-1. Retrovirology 6, 64.
-
(2009)
Retrovirology
, vol.6
, pp. 64
-
-
Krementsov, D.N.1
Weng, J.2
Lambele, M.3
Roy, N.H.4
Thali, M.5
-
25
-
-
77956569249
-
A role for the histone deacetylase HDAC4 in the life-cycle of HIV-1-based vectors
-
Smith, J. A., Yeung, J., Kao, G. D., Daniel, R. (2010) A role for the histone deacetylase HDAC4 in the life-cycle of HIV-1-based vectors. Virol. J. 7, 237.
-
(2010)
Virol. J.
, vol.7
, pp. 237
-
-
Smith, J.A.1
Yeung, J.2
Kao, G.D.3
Daniel, R.4
-
26
-
-
79952605355
-
Chromatin reassembly factors are involved in transcriptional interference promoting HIV latency
-
Gallastegui, E., Millan-Zambrano, G., Terme, J. M., Chavez, S., Jordan, A. (2011) Chromatin reassembly factors are involved in transcriptional interference promoting HIV latency. J. Virol. 85, 3187-3202.
-
(2011)
J. Virol.
, vol.85
, pp. 3187-3202
-
-
Gallastegui, E.1
Millan-Zambrano, G.2
Terme, J.M.3
Chavez, S.4
Jordan, A.5
-
27
-
-
34247185736
-
Leukemia inhibitor factor (LIF) inhibits HIV-1 replication via restriction of stat 3 activation
-
Tjernlund, A., Walther-Jallow, L., Behbahani, H., Screpanti, V., Nowak, P., Grandien, A., Andersson, J., Patterson, B. K. (2007) Leukemia inhibitor factor (LIF) inhibits HIV-1 replication via restriction of stat 3 activation. AIDS Res. Hum. Retroviruses 23, 398-406.
-
(2007)
AIDS Res. Hum. Retroviruses
, vol.23
, pp. 398-406
-
-
Tjernlund, A.1
Walther-Jallow, L.2
Behbahani, H.3
Screpanti, V.4
Nowak, P.5
Grandien, A.6
Andersson, J.7
Patterson, B.K.8
-
28
-
-
77952499961
-
T cell-based functional cDNA library screening identified SEC14-like 1a carboxy-terminal domain as a negative regulator of human immunodeficiency virus replication
-
Urano, E., Ichikawa, R., Morikawa, Y., Yoshida, T., Koyanagi, Y., Komano, J. (2010) T cell-based functional cDNA library screening identified SEC14-like 1a carboxy-terminal domain as a negative regulator of human immunodeficiency virus replication. Vaccine 28 (Suppl. 2), B68-B74.
-
(2010)
Vaccine
, vol.28
, Issue.SUPPL. 2
-
-
Urano, E.1
Ichikawa, R.2
Morikawa, Y.3
Yoshida, T.4
Koyanagi, Y.5
Komano, J.6
-
29
-
-
33845966418
-
SerpinB2 is an inducible host factor involved in enhancing HIV-1 transcription and replication
-
Darnell, G. A., Schroder, W. A., Gardner, J., Harrich, D., Yu, H., Medcalf, R. L., Warrilow, D., Antalis, T. M., Sonza, S., Suhrbier, A. (2006) SerpinB2 is an inducible host factor involved in enhancing HIV-1 transcription and replication. J. Biol. Chem. 281, 31348-31358.
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 31348-31358
-
-
Darnell, G.A.1
Schroder, W.A.2
Gardner, J.3
Harrich, D.4
Yu, H.5
Medcalf, R.L.6
Warrilow, D.7
Antalis, T.M.8
Sonza, S.9
Suhrbier, A.10
-
30
-
-
0029055286
-
Identification of a novel human zinc finger protein that specifically interacts with the activation domain of lentiviral Tat proteins
-
Fridell, R. A., Harding, L. S., Bogerd, H. P., Cullen, B. R. (1995) Identification of a novel human zinc finger protein that specifically interacts with the activation domain of lentiviral Tat proteins. Virology 209, 347-357.
-
(1995)
Virology
, vol.209
, pp. 347-357
-
-
Fridell, R.A.1
Harding, L.S.2
Bogerd, H.P.3
Cullen, B.R.4
-
31
-
-
79959312832
-
Long-term programming of antigen-specific immunity from gene expression signatures in the PBMC of rhesus macaques immunized with an SIV DNA vaccine
-
Belisle, S. E., Yin, J., Shedlock, D. J., Dai, A., Yan, J., Hirao, L., Kutzler, M. A., Lewis, M. G., Andersen, H., Lank, S. M. (2011) Long-term programming of antigen-specific immunity from gene expression signatures in the PBMC of rhesus macaques immunized with an SIV DNA vaccine. PLoS One 6, e19681.
-
(2011)
PLoS One
, vol.6
-
-
Belisle, S.E.1
Yin, J.2
Shedlock, D.J.3
Dai, A.4
Yan, J.5
Hirao, L.6
Kutzler, M.A.7
Lewis, M.G.8
Andersen, H.9
Lank, S.M.10
-
32
-
-
78650655851
-
Genomic analysis reveals pre-and postchallenge differences in a rhesus macaque AIDS vaccine trial: Insights into mechanisms of vaccine efficacy
-
Palermo, R. E., Patterson, L. J., Aicher, L. D., Korth, M. J., Robert-Guroff, M., Katze, M. G. (2011) Genomic analysis reveals pre-and postchallenge differences in a rhesus macaque AIDS vaccine trial: insights into mechanisms of vaccine efficacy. J. Virol. 85, 1099-1116.
-
(2011)
J. Virol.
, vol.85
, pp. 1099-1116
-
-
Palermo, R.E.1
Patterson, L.J.2
Aicher, L.D.3
Korth, M.J.4
Robert-Guroff, M.5
Katze, M.G.6
-
33
-
-
79957912712
-
Comparative transcriptomics of extreme phenotypes of human HIV-1 infection and SIV infection in sooty mangabey and rhesus macaque
-
Rotger, M., Dalmau, J., Rauch, A., McLaren, P., Bosinger, S. E., Martinez, R., Sandler, N. G., Roque, A., Liebner, J., Battegay, M. (2011) Comparative transcriptomics of extreme phenotypes of human HIV-1 infection and SIV infection in sooty mangabey and rhesus macaque. J. Clin. Invest. 121, 2391-2400.
-
(2011)
J. Clin. Invest.
, vol.121
, pp. 2391-2400
-
-
Rotger, M.1
Dalmau, J.2
Rauch, A.3
McLaren, P.4
Bosinger, S.E.5
Martinez, R.6
Sandler, N.G.7
Roque, A.8
Liebner, J.9
Battegay, M.10
|