Erratum: Diversification of rhacophorid frogs provides evidence for accelerated faunal exchange between India and Eurasia during the Oligocene (Proceedings of the National Academy of Sciences of the United States of America (2013) 110:9 (3441-3446) DOI:10.1073/pnas.1300881110);Diversification of rhacophorid frogs provides evidence for accelerated faunal exchange between India and Eurasia during the Oligocene

Proceedings of the National Academy of Sciences of the United States of America

Volumn 110, Issue 9, 2013, Pages 3441-3446

  Li, Jia Tang ^a,b   Li, Yang ^a,c   Klaus, Sebastian ^d   Rao, Ding Qi ^a   Hillis, David M ^e   Zhang, Ya Ping ^a,f  

^a KUNMING INSTITUTE OF ZOOLOGY   (China)

^b CHENGDU INSTITUTE OF BIOLOGY   (China)

^c SICHUAN UNIVERSITY   (China)

^d GOETHE UNIVERSITY   (Germany)

^e UNIVERSITY OF TEXAS AT AUSTIN   (United States)

^f YUNNAN UNIVERSITY   (China)

Author keywords

Molecular dating; Phylogeography; Tectonics

Indexed keywords

ANIMAL TISSUE; ANURA; ARTICLE; CONTROLLED STUDY; EOCENE; FAUNA; FOSSIL; GEOLOGY; INDIA; MIDDLE MIOCENE; NONHUMAN; OLIGOCENE; PHYLOGENY; PRIORITY JOURNAL; SOUTHEAST ASIA; SPECIES DISTRIBUTION; SPECIES DIVERSITY;

EID: 84874499148     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1304031110     Document Type: Erratum

References (62)

1. Karanth KP (2006) Out-of-India Gondwanan origin of some tropical Asian biota. Curr Sci 90: 789-792.
2. Biju SD, Bossuyt F (2003) New frog family from India reveals an ancient biogeographical link with the Seychelles. Nature 425(6959): 711-714.
3. Bossuyt F, Milinkovitch MC (2001) Amphibians as indicators of early tertiary "out-of- India" dispersal of vertebrates. Science 292(5514): 93-95.
4. Conti E, Eriksson T, Schönenberger J, Sytsma KJ, Baum DA (2002) Early Tertiary out-of- India dispersal of Crypteroniaceae: Evidence from phylogeny and molecular dating. Evolution 56(10): 1931-1942.
5. Datta-Roy A, Karanth KP (2009) The out-of-India hypothesis: What do molecules suggest? J Biosci 34(5): 687-697.
6. Gower DJ, et al. (2002) A molecular phylogeny of ichthyophiid caecilians (Amphibia: Gymnophiona: Ichthyophiidae): out of India or out of South East Asia? Proc Biol Sci 269(1500): 1563-1569.
7. Roelants K, Jiang J, Bossuyt F (2004) Endemic ranid (Amphibia: Anura) genera in southern mountain ranges of the Indian subcontinent represent ancient frog lineages: Evidence from molecular data. Mol Phylogenet Evol 31(2): 730-740.
8. Wilkinson M, A Sheps J, Oommen OV, Cohen BL (2002) Phylogenetic relationships of Indian caecilians (Amphibia: Gymnophiona) inferred from mitochondrial rRNA gene sequences. Mol Phylogenet Evol 23(3): 401-407.
9. Marshall LG (1988) Land mammals and the Great American Interchange. Am Sci 76: 380-388.
10. Aitchison JC, Ali JR, Davis AM (2007) When and where did India and Asia collide? J Geophys Res 112:B05423.
11. Aitchison JC, Ali JR (2012) India-Asia collision timing. Proc Natl Acad Sci USA 109(40): E2645-, author reply E2646.
12. Ali JR, Aitchison JC (2008) Gondwana to Asia: Plate tectonics, paleogeography and the biological connectivity of the Indian sub-continent from the Middle Jurassic through latest Eocene (166-35 Ma). Earth Sci Rev 88: 145-166.
13. Ali JR, Aitchison JC (2012) Comment on "Restoration of Cenozoic deformation in Asia and the size of Greater India" by D. J. J. van Hinsbergen et al. Tectonics 31:TC4006.
14. van Hinsbergen DJ, et al. (2011) Restoration of Cenozoic deformation in Asia and the size of Greater India. Tectonics 30:TC5003.
15. van Hinsbergen DJ, et al. (2012) Reply to comment by Ali and Aitchison on "Restoration of Cenozoic deformation in Asia, and the size of Greater India" Tectonics 31: TC4007.
16. van Hinsbergen DJ, et al. (2012) Greater India Basin hypothesis and a two-stage Cenozoic collision between India and Asia. Proc Natl Acad Sci USA 109(20): 7659-7664.
17. van Hinsbergen DJ, et al. (2012) Reply to Aitchison and Ali: Reconciling Himalayan ophiolite and Asian magmatic arc records with a two-stage India-Asia collision model. Proc Natl Acad Sci USA 109:E2646.
18. Beck RA, et al. (1995) Stratigraphic evidence for an early collision between northwest India and Asia. Nature 373: 55-58.
19. Klaus S, Schubart CD, Streit B, Pfenninger M (2010) When Indian crabs were not yet Asian - biogeographic evidence for Eocene proximity of India and Southeast Asia. BMC Evol Biol 10: 287.
20. Che J, et al. (2010) Spiny frogs (Paini) illuminate the history of the Himalayan region and Southeast Asia. Proc Natl Acad Sci USA 107(31): 13765-13770.
21. Duellman WE, Trueb L (1986) Biology of Amphibians (McGraw-Hill, New York).
22. Heinicke MP, Duellman WE, Hedges SB (2007) Major Caribbean and Central American frog faunas originated by ancient oceanic dispersal. Proc Natl Acad Sci USA 104(24): 10092-10097.
23. Zeisset I, Beebee TJC (2008) Amphibian phylogeography: A model for understanding historical aspects of species distributions. Heredity (Edinb) 101(2): 109-119.
24. Zhang P, et al. (2006) Phylogeny, evolution, and biogeography of Asiatic Salamanders (Hynobiidae). Proc Natl Acad Sci USA 103(19): 7360-7365.
25. Amphibian Species of the World. Version 5.5. Electronic Database. (American Museum of Natural History, New York). Available at http://research.amnh.org/vz/herpetology/amphibia/. Accessed January 31, 2011.
26. Frost DR, et al. (2006) The amphibian tree of life. Bull Am Mus Nat Hist 297: 1-370.
27. Pyron RA, Wiens JJ (2011) A large-scale phylogeny of Amphibia including over 2800 species, and a revised classification of extant frogs, salamanders, and caecilians. Mol Phylogenet Evol 61(2): 543-583.
28. Liem SS (1970) The morphology, systematics, and evolution of the Old World tree frogs (Rhacophoridae and Hyperoliidae). Fieldiana: Zool 57: 1-145.
29. Richards CM, Moore WS (1998) A molecular phylogenetic study of the Old World tree frog family Rhacophoridae. Herpetol J 8: 41-46.
30. Bossuyt F, Brown RM, Hillis DM, Cannatella DC, Milinkovitch MC (2006) Phylogeny and biogeography of a cosmopolitan frog radiation: Late cretaceous diversification resulted in continent-scale endemism in the family ranidae. Syst Biol 55(4): 579-594.
31. Van Bocxlaer I, Roelants K, Biju SD, Nagaraju J, Bossuyt F (2006) Late Cretaceous vicariance in Gondwanan amphibians. PLoS ONE 1:e74.
32. Vences M, Kosuch J, Glaw F, Böhme W, Veith M (2003) Molecular phylogeny of hyperoliid treefrogs: Biogeographic origin of Malagasy and Seychellean taxa and reanalysis of familial pa-raphyly. J Zoological Syst Evol Res 41: 205-215.
33. Folie A, et al. (2012) Early Eocene frogs from Vastan Lignite Mine, Gujarat, India. Acta Palaeontol Pol, 10.4202/app.2011.0063.
34. Rutschmann F, Eriksson T, Schönenberger J, Conti E (2004) Did Crypteroniaceae really disperse out-of-India? Molecular dating evidence from rbcL, ndhF, and rpl16 intron sequences. Int J Plant Sci 165: 69-83.
35. Ali JR, Aitchison JC (2006) Positioning Palaeogene Eurasia problem: Solution for 60-50 Ma and broader tectonic implications. Earth Planet Sci Lett 251: 148-155.
36. Patriat P, Achache J (1984) India-Eurasia collision chronology has implcations for crustal shortening and driving mechanisms of plates. Nature 311: 615-621.
37. Leech ML, Singh S, Jain AK, Klemperer SL, Manickavasagam RM (2005) The onset of India-Asia continental collision: Early, steep subduction required by the timing of UHP metamorphism in the western Himalaya. Earth Planet Sci Lett 234: 83-97.
38. Clyde WC, Khan IH, Gingerich PD (2003) Stratigraphic response and mammalian dispersal during initial India-Asia collision: Evidence from the Ghazji Formation, Balochistan, Pakistan. Geology 31: 1097-1100.
39. Sahni A (2006) Biotic response to the India-Asia collision: Changing palaeoenvironments and vertebrate faunal relationships. Palaeont Abt A Palaozool-Stratigr 278: 15-26.
40. Acton GD (1999) Apparent polar wander of India since the Cretaceous with implications for regional tectonics and true polar wander. Mem Geol Soc India 44: 129-175.
41. Morley RJ (2011) Tropical Rainforest Responses to Climate Change, eds Bush MB, Flenley JR (Springer, Heidelberg), pp 1-34.
42. Royden LH, Burchfiel BC, van der Hilst RD (2008) The geological evolution of the Tibetan Plateau. Science 321(5892): 1054-1058.
43. Liu XD, Yin ZY (2002) Sensitivity of East Asian monsoon climate to the uplift of the Tibetan Plateau. Palaeogeogr Palaeoclimatol Palaeoecol 183: 223-245.
44. Guo ZT, et al. (2002) Onset of Asian desertification by 22 Myr ago inferred from loess deposits in China. Nature 416(6877): 159-163.
45. Qiu ZD, Li C (2004) The evolution of mammal fauna in China and the uplift of Qinghai-Xizang Plateau. Sci China Ser D 34: 845-854.
46. Sun X, Wang P (2005) How old is the Asian monsoon system? Palaeobotanical records from China. Palaeogeogr Palaeoclimatol Palaeoecol 222: 181-222.
47. Meegaskumbura M, et al. (2010) Taruga (Anura: Rhacophoridae), a new genus of foam-nesting tree frogs endemic to Sri Lanka. Ceylon J Sci. Biol Sci 39(2): 75-94.
48. Hillis DM, Moritz C, Mable BK (1996) Molecular Systematics (Sinauer, Sunderland, MA), 2nd Ed.
49. Sambrook J, Fritsch EF, Mantiatis T (1989) Molecular Cloning: A Laboratory Manual (Cold Spring Harbor Lab Press, NY), 2nd Ed.
50. Li JT, Che J, Bain RH, Zhao EM, Zhang YP (2008) Molecular phylogeny of Rhacophoridae (Anura): A framework of taxonomic reassignment of species within the genera Aquixalus, Chiromantis, Rhacophorus, and Philautus. Mol Phylogenet Evol 48(1): 302-312.
51. Li JT, et al. (2009) New insights to the molecular phylogenetics and generic assessment in the Rhacophoridae (Amphibia: Anura) based on five nuclear and three mitochondrial genes, with comments on the evolution of reproduction. Mol Phylogenet Evol 53(2): 509-522.
52. Wilkinson JA, Drewes RC, Tatum OL (2002) A molecular phylogenetic analysis of the family Rhacophoridae with an emphasis on the Asian and African genera. Mol Phylogenet Evol 24(2): 265-273.
53. Altschul SF, et al. (1997) Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res 25(17): 3389-3402.
54. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25(24): 4876-4882.
55. Xia X (2000) DAMBE: Data Analysis in Molecular Biology and Evolution (Kluwer Academic, Boston).
56. Drummond AJ, Rambaut A (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7: 214.
57. Brandley MC, Schmitz A, Reeder TW (2005) Partitioned Bayesian analyses, partition choice, and the phylogenetic relationships of scincid lizards. Syst Biol 54(3): 373-390.
58. Rambaut A, Drummond AJ (2007) Tracer v1.4. Available at http://beast.bio.ed.ac.uk/Tracer. Accessed June 15, 2009.
59. Nylander JAA, Wilgenbusch JC, Warren DL, Swofford DL (2008) AWTY (are we there yet?): A system for graphical exploration of MCMC convergence in Bayesian phylogenetics. Bioinformatics 24(4): 581-583.
60. Vences M, et al. (2003) Multiple overseas dispersal in amphibians. Proc Biol Sci 270(1532): 2435-2442.
61. Yu Y, Harris AJ, He XJ (2011) RASP (Reconstruct Ancestral State in Phylogenies) 2.0 beta. Available at http://mnh.scu.edu.cn/soft/blog/RASP. Accessed July 15, 2012.
62. Ree RH, Smith SA (2008) Maximum likelihood inference of geographic range evolution by dispersal, local extinction, and cladogenesis. Syst Biol 57(1): 4-14.