Modeling the long-term impacts of logging on genetic diversity and demography of hymenaea courbaril

Forest Science

Volumn 59, Issue 1, 2013, Pages 15-26

  de Lacerda, André Eduardo Biscaia ^a   Nimmo, Evelyn Roberta ^b   Sebbenn, Alexandre Magno ^c  

^a EMBRAPA CERRADOS   (Brazil)

^b UNIVERSITY OF MANITOBA   (Canada)

^c Instituto Florestal de São Paulo   (Brazil)

Author keywords

Genetic diversity; Hymenaea courbaril; Microsatellite loci; Neotropics; Selective logging; Tropical tree species

Indexed keywords

FORESTRY; HARVESTING; POPULATION STATISTICS; SOFTWARE TESTING; SUSTAINABLE DEVELOPMENT;

GENETIC DIVERSITY; HYMENAEA COURBARIL; MICROSATELLITE LOCI; NEOTROPICS; SELECTIVE LOGGING; TROPICAL TREE SPECIES;

BIODIVERSITY;

BIODIVERSITY; COMPUTER PROGRAMS; FORESTRY; HARVESTING; LOGGING; SPECIES IDENTIFICATION; TESTING; TREES;

EID: 84874444797     PISSN: 0015749X     EISSN: None     Source Type: Journal    
DOI: 10.5849/forsci.10-118     Document Type: Article

References (52)

1. AYRES, J.M., and A.D. JOHNS. 1987. Conservation of white uacaries in Amazonian várzea. Oryx 21:74-80.
2. AZEVEDO, V.C.R., M. KANASHIRO, A.Y. CIAMPI and D. GRAT-TAPAGLIA. 2007. Genetic structure and mating system of Manilkara huberi (Ducke) A. Chev., a heavily logged Amazonian timber species. J. Hered. 98:646-654.
3. BRIENEN, R.J.W., and P.A. ZUIDEMA. 2006. The use of tree rings in tropical forest management: Projecting timber yields of four Bolivian tree species. For. Ecol. Manage. 226:256-267.
4. BUENAFLOR, V. 1989. Logging in Papua New Guinea. Food and Agriculture Organization of the United Nations, Rome, Italy. 67 p.
5. BURGESS, P.F. 1971. Effect of logging on hill dipterocarp forest. Malaysan Nat. J. 24:231-237.
6. CARNEIRO, F.S., B. DEGEN, M. KANASHIRO, A.E.B. LACERDA, and A.M. SEBBENN. 2009. High levels of pollen dispersal detected through paternity analysis from a continuous Symphonia globulifera population in the Brazilian Amazon. For. Ecol. Manage. 258:1260-1266.
7. CLOUTIER, D., M. KANASHIRO, A.Y. CIAMPI, and D.J. SCHOEN. 2007. Impact of selective logging on inbreeding and gene dispersal in an Amazonian tree population of Carapa guianensis Aubl. Mol. Ecol. 16:797-809.
8. CONAMA. 2009. Resoluçãono406,de02defevereirode2009. Estabelece parâmetros técnicos a serem adotados na elaboração, apresentação, avaliação técnica e execução de Plano de Manejo Florestal Sustentável-PMFS com fins madeireiros, para florestas nativas e suas formas de sucessão no bioma Amazônia. Diário Oficial [da República Federativa do Brasil], no. 26, p. 100. Brasília, Brazil.
9. DEGEN, B., L. BLANC, H. CARON, L. MAGGIA, A. KREMER, and S. GOURLET-FLEURY. 2006. Impact of selective logging ongenetic composition and demographic structure of four tropical tree species. Biol. Cons. 131:386-401.
10. DEGEN, B., H.R. GREGORIUS, and F. SCHOLTZ. 1996. ECOGENE: A model for simulation studies on the spatial and temporal dynamics of genetic structures of tree populations. Silvae Genet. 45:323-329.
11. DEGEN, B., and D.W. ROUBIK. 2004. Effects of animal pollination on pollen dispersal, selfing, and effective population size of tropical trees: A simulation study. Biotropica 36:165-179.
12. DYKSTRA, D.P. 2002. Reduced impact logging: Concepts and issues. P. 9-17 in Applying reduced impact logging to advance sustainable forest management, Enters, T., P.B. Durst, G.B. Applegate, P.C.S. Kho, and G. Man (eds.). Food and Agriculture Organization of the United Nations, Bangkok, Thailand.
13. DYKSTRA, D.P., and HEINRICH, R. 1996. FAO model code of forest harvesting practice. Food and Agriculture Organization of the United Nations, Rome, Italy. 85 pp.
14. FOOD AND AGRICULTURE ORGANIZATION. 1993. Forest resources assessment 1990: Tropical countries. FAO Forestry Paper No. 112. Food and Agriculture Organization of the United Nations, Rome, Italy.
15. GALLOZZI, M.R. 2007. ICITA-FSC Public Audit Report SEFAC Group-Douala, Cameroon. ICITA-FSC, Lissone, Italy. 42 P:
16. GENTRY, A.H. 1988. Tree species richness of upper Amazonian forests. Proc. Nat. Acad. Sci. U.S.A. 85:156-159.
17. GORCHOV, D.L., J.M. PALMEIRIM, and C.F. ASCORRA. 2004. Dispersal of seeds of Hymenaea courbaril (Fabaceae) in a logged rain forest in the Peruvian Amazonian. Acta Amazonica 34:251-259.
18. GOURLET-FLEURY, S., G. CORNU, S. JÉSEL, H. DESSARD, J.-G. JOURGET, L. BLANC, and N. PICARD. 2005. Using models to predict recovery and assess tree species vulnerability in logged tropical forests: A case study from French Guiana. For. Ecol. Manage. 209:69-86.
19. GOURLET-FLEURY, S., V. FAVRICHON, and P. PETRONELLI. 2004. Consequences of silvicultural treatments on stand dynamics at Paracou. P. 254-280 in Lessons drawn from Paracou, a longterm experimental research site in French Guiana, GourletFleury, S., J.M. Guehl, and O. Laroussinie (eds.). Elsevier, Paris, France.
20. GUARIGUATA, M.R., and M.A. PINARD. 1998. Ecological knowledge of regeneration from seed in neotropical forest trees: Implications for natural forest management. For. Ecol. Manage. 112:87-99.
21. IBAMA. 2004. Floresta Nacional do Tapajós-Plano de manejo. Brazilian Institute of Environment and Renewable Natural Resources (IBAMA), Brasília, Brazil. 373 p.
22. INTERNATIONAL TROPICAL TIMBER ORGANIZATION. 1990. ITTO guidelines for the sustainable management of natural tropical forests. Tech. Ser. 5. International Tropical Timber Organization, Yokohama, Japan.
23. JANZEN, D.H. 1975. Behavior of Hymenaea courbaril when its predispersal seed predator is absent. Science 89:145-147.
24. JOHNS, A.D. 1988. Effects of "selective" timber extraction on rain forest structure and composition and some consequences for frugivores and folivores. Biotropica 20:31-37.
25. KANASHIRO, M., I.S. THOMPSON, J.A.G. YARED, M.D. LOVELLESS, P. COVENTRY, R.C.V. MARTINS-DA-SILVA, B. DEGEN, and W.A. AMARAL. 2002. Improving conservation values of managed forest: The Dendrogene Project in the Brazilian Amazon. Unasylva 209:26-33.
26. LACERDA, A.E.B. 2007. Ecological and genetic impacts of reducedimpact logging in the Brazilian Amazonian forest-The case of Hymenaea courbaril L. PhD thesis, Univ. of Reading, Reading, UK. 310 p.
27. LACERDA, A.E.B., M. KANASHIRO, and A.M. SEBBENN. 2008a. Long-pollen movement and deviation of random mating in a low-density continuous population of a tropical tree Hymenaea courbaril in the Brazilian Amazon. Biotropica 40:462-470.
28. LACERDA, A.E.B., M. KANASHIRO, and A.M. SEBBENN. 2008b. Effects of reduced impact logging on genetic diversity and spatial genetic structure of a Hymenaea courbaril population in the Brazilian Amazon forest. For. Ecol. Manage. 255: 1034-1043.
29. LACERDA, A.E.B., and E.R. NIMMO. 2010. Can we really manage tropical forests without knowing the species within? Getting back to the basics of forest management through taxonomy. For. Ecol. Manage. 259:995-1002.
30. LEE, Y.T., and J.H. LANGENHEIM. 1975. Systematics of the genus Hymenaea L. (Leguminosae, Caesalpiniodeae, Detarieae). University of California Publications in Botany, vol. 69. University of California Press, Berkeley, CA. 109 p.
31. LEE, C.-T., R. WICKNESWARI, M.C. MAHANI, and A.H. ZAKRI. 2002. Effect of selective logging on the genetic diversity of Scaphium macropodum. Biol. Conserv. 104:107-118.
32. MARSHALL, T.C., J. SLATE, L.E.B. KRUUK, and J.M. PEMBERTON. 1998. Statistical confidence for likelihood-based paternity inference in natural populations. Mol. Ecol. 7:639-655.
33. MAUES, M.M. 2006. Estratégias reprodutivas de espécies arbóreas e sua importância para o manejo e a conservaç̃o florestal: Floresta Nacional do Tapajós (Beletera-Pará). PhD thesis, Univ. Federal de Brasília, Brasília, Brazil. 206 p.
34. NICHOLSON, D.I. 1958. An analysis of logging damage in tropical rain forest. N. Borneo Malaysan For. 21:235-245.
35. OLIVEIRA, P.S., M. GALETTI, F. PEDRONI, and L.P.C. MORELLATO. 1995. Seed cleaning by Mycocepurus goeldii ants (Attini) facilitates germination in Hymenaea courbaril (Caesalpiniaceae). Biotropica 27:518-522.
36. PHILLIPS, O.L., P. HALL, A.H. GENTRY, S.A. SAWYER, and R. V ÁSQUEZ. 1994. Dynamics and species richness of tropical forests. Proc. Natl. Acad. Sci. U.S.A. 91:2805-2809.
37. PHILLIPS, P.D., C.P. AZEVEDO, B. DEGEN, P.R. VAN GARDINGEN, I.S. THOMPSON, and J.N.M. SILVA. 2004. An individual-based spatially explicit simulation model for strategic forest management planning in the eastern Amazon. Ecol. Model. 173: 335-354.
38. PINARD, M.A., and F.E. PUTZ. 1996. Conserving forest biomass by reducing logging damage. Biotropica 28:278-295.
39. PINARD, M.A., F.E. PUTZ, J. TAY, AND T.E. SULLIVAN. 1995. Creating timber harvest guidelines for a reduced-impact logging project in Malaysia. J. For. 93:41-45.
40. PUTZ, F.E., and M.A. PINARD. 1993. Reduced-impact logging as a carbon-offset method. Conserv. Biol. 7:755-757.
41. RITLAND, K., and S. JAIN. 1981. A model for the estimation of outcrossing rate and gene frequencies using independent loci. Heredity 47:35-52.
42. SAVOLAINEN, O., and K. Kärkkäinen. 1992. Effect of forest management on gene pools. New For. 6:329-345.
43. SEBBENN, A.M., A.C.M. CARVALHO, M.L.M. FREITAS, S.M.B. MORAES, A.P.S.C. GAINO, J.M. DA SILVA, C. JOLIVET, and M.L.T. MORAES. 2011. Low levels of realized seed and pollen gene flow and strong spatial genetic structure in a small, isolated and fragmented population of the tropical tree Copaifera langsdorffii Desf. Heredity 106:134-145.
44. SEBBENN, A.M., B. DEGEN, V.C.R. AZEVEDO, M.B. SILVA, A.E.B. LACERDA, A.Y. CIAMPI, M. KANASHIRO, F.S. CARNEIRO, I. THOMPSON, and M.D. LOVELESS. 2008. Modelling the longterm impacts of selective logging on genetic diversity and demographic structure of four tropical tree species in the Amazon forest. For. Ecol. Manage. 254:335-349.
45. SILVA, J.N.M., J.O.P. CARVALHO, J.C.A. LOPES, B.F. ALMEIDA, D.H.M. COSTA, L.C. OLIVEIRA, J.K. VANCLAY, and J.P. SKOVSGAARD. 1995. Growth and yield of a tropical rain forest in the Brazilian Amazon 13 years after logging. For. Ecol. Manage. 71:267-274.
46. SILVA, M.B., M. KANASHIRO, A.Y. CIAMPI, I. THOMPSON, and A.M. SEBBENN. 2008. Genetic effects of selective logging and pollen gene flow in a low-density population of the dioecious tropical tree Bagassa guianensis in the Brazilian Amazon. For. Ecol. Manage. 255:1548-1558.
47. UHL, C., and I.C.G. VIERA. 1989. Ecological impacts of selective logging in the Brazilian Amazon: A case study from the Paragominas region of the State of Para. Biotropica 21:98-106.
48. VAN GARDINGEN, P.R., D. VALLE, and I. THOMPSON. 2006. Evaluation of yield regulation options for primary forest in Tapajós National Forest, Brazil. For. Ecol. Manage. 231:184-195.
49. VINSON, C.C. 2009. Impact of selective logging on inbreeding and gene flow in two Amazonian timber species with contrasting ecological and reproductive characteristics. PhD thesis, Univ. of Oxford, Oxford, UK. 172 p.
50. WERNSD ÖRFER, H., H. CARON, S. GERBER, G. CORNU, V. ROSSI, F. MORTIER, and S. GOURLET-FLEURY. 2011. Relationships between demography and gene flow and their importance for the conservation of tree populations in tropical forests under selective felling regimes. Conserv. Genet. 12:15-29.
51. YEOM, F.B.C. 1984. Lesser-known tropical wood species: How bright is their future? Unasylva 36:3-16.
52. ZARIN, D.J., M.D. SCHULZE, E. VIDAL, and M. LENTINI. 2007. Beyond reaping the first harvest: Management objectives for timber production in the Brazilian Amazon. Conserv. Biol. 21:916-925.