Modular assembly of yeast cytochrome oxidase

Molecular Biology of the Cell

Volumn 24, Issue 4, 2013, Pages 440-452

  McStay, Gavin P ^a   Su, Chen Hsien ^a   Tzagoloff, Alexander ^a  

^a Och Spine at New York Presbyterian Hospitals   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOCHROME C OXIDASE; CYTOCHROME C OXIDASE 1P; CYTOCHROME C OXIDASE 2P; CYTOCHROME C OXIDASE 3P; ENZYME; HOLOENZYME; PROTON TRANSPORTING ADENOSINE TRIPHOSPHATE SYNTHASE; UNCLASSIFIED DRUG;

ARTICLE; BIOGENESIS; GENE PRODUCT; MITOCHONDRION; NONHUMAN; PRIORITY JOURNAL; PROTEIN EXPRESSION; SACCHAROMYCES CEREVISIAE;

BIOLOGICAL EVOLUTION; ELECTRON TRANSPORT COMPLEX IV; GENE EXPRESSION REGULATION, FUNGAL; HOLOENZYMES; MITOCHONDRIA; MITOCHONDRIAL PROTEINS; MUTATION; PROTEIN BIOSYNTHESIS; PROTEIN SUBUNITS; RECOMBINANT FUSION PROTEINS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS;

EID: 84874428749     PISSN: 10591524     EISSN: 19394586     Source Type: Journal    
DOI: 10.1091/mbc.E12-10-0749     Document Type: Article

References (39)

1. Barrientos A, Zambrano A, Tzagoloff A (2004). Mss51p and Cox14p jointly regulate mitochondrial Cox1p expression in Saccharomyces cerevisiae. EMBO J 23, 3472-3482.
2. Bestwick MM, Jeong Y, Khalimonchuk O, Kim Y, Winge DR (2010). Analysis of Leigh syndrome mutations in the yeast SURF1 homolog reveals a new member of the cytochrome oxidase assembly factor family. Mol Cell Biol 30, 4480-4491.
3. Bonnefoy N, Fox TD (2007). Directed alteration of Saccharomyces cerevisiae mitochondrial DNA by biolistic transformation and homologous recombination. Methods Mol Biol 372, 153-166.
4. Carr HS, Winge DR (2003). Assembly of cytochrome c oxidase within the mitochondrion. Acc Chem Res 36, 309-316.
5. Choquet Y, Wostrikoff K, Rimbault B, Zito F, Girard-Bascou J, Drapier D, Wollman FA (2001). Assembly-controlled regulation of chloroplast gene translation. Biochem Soc Trans 29, 421-426.
6. Cobine PA, Pierrel F, Winge DR (2006). Copper trafficking to the mitochondrion and assembly of copper metalloenzymes. Biochim Biophys Acta 1763, 759-772.
7. Dieckmann C L, Tzagoloff A (1985). Assembly of the mitochondrial membrane system. CBP6, a yeast nuclear gene necessary for synthesis of cytochrome b. J Biol Chem 260, 1513-1520.
8. Fontanesi F, Clemente P, Barrientos A (2011). Cox25 teams up with Mss51, Ssc1, and Cox14 to regulate mitochondrial cytochrome c oxidase subunit 1 expression and assembly in Saccharomyces cerevisiae. J Biol Chem 286, 555-566.
9. Fontanesi F, Soto IC, Horn D, Barrientos A (2010). Mss51 and Ssc1 facilitate translational regulation of cytochrome c oxidase biogenesis. Mol Cell Biol 30, 245-259.
10. Glerum DM, Tzagoloff A (1997). Submitochondrial distributions and stabilities of subunits 4, 5, and 6 of yeast cytochrome oxidase in assembly defective mutants. FEBS Lett 412, 410-414.
11. Hannappel AF, Bundschuh A, Ludwig B (2012). Role of Surf1 in heme recruitment for bacterial COX biogenesis. Biochim Biophys Acta 1817, 928-937.
12. Heinemeyer J, Braun HP, Boekema EJ, Kouril R (2007). A structural model of the cytochrome c reductase/oxidase supercomplex from yeast mitochondria. J Biol Chem 282, 12240-12248.
13. Herrmann JM, Foelsch H, Neupert W, Stuart RA (1994). Isolation of yeast mitochondria and study of mitochondrial protein translation. In: Cell Biology: A Laboratory Handbook, Vol. I, ed. JE Celis, San Diego, CA: Academic Press, 538-544.
14. Hill JE, Myers AM, Koerner TJ, Tzagoloff A (1986). Yeast/E. coli shuttle vectors with multiple unique restriction sites. Yeast 2, 163-167.
15. Horan S, Bourges I, Taanman JW, Meunier B (2005). Analysis of COX2 mutants reveals cytochrome oxidase subassemblies in yeast. Biochem J 390, 703-708.
16. Khalimonchuk O, Bestwick M, Meunier B, Watts TC, Winge DR (2010). Formation of the redox cofactor centers during Cox1 maturation in yeast cytochrome oxidase. Mol Cell Biol 30, 1004-1017.
17. Kim HJ, Khalimonchuk O, Smith PM, Winge DR (2012). Structure, function, and assembly of heme centers in mitochondrial respiratory complexes. Biochim Biophys Acta 1823, 1604-1616.
18. Laemmli UK (1970). Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227, 680-685.
19. Lowry OH, Rosebrough NJ, Farr AL, Randall RJ (1951). Protein measurement with the Folin phenol reagent. J Biol Chem 193, 265-275.
20. Mick DU, Fox TD, Rehling P (2011). Inventory control: Cytochrome c oxidase assembly regulates mitochondrial translation. Nat Rev Mol Cell Biol 12, 14-20.
21. Mick DU, Vukotic M, Piechura H, Meyer HE, Warscheid B, Deckers M, Rehling P (2010). Coa3 and Cox14 are essential for negative feedback regulation of COX1 translation in mitochondria. J Cell Biol 191, 141-154.
22. Mick DU, Wagner K, van der Laan M, Frazier AE, Perschil I, Pawlas M, Meyer HE, Warscheid B, Rehling P (2007). Shy1 couples Cox1 translational regulation to cytochrome c oxidase assembly. EMBO J 26, 4347-4358.
23. Mileykovskaya E, Penczek PA, Fang J, Mallampalli VK, Sparagna GC, Dowhan D (2012). Arrangement of the respiratory chain complexes in Saccharomyces cerevisiae supercomplex III2IV2 revealed by single particle cryo-electron microscopy. J Biol Chem 287, 23095-23103.
24. Moreno-Lastres D, Fontanesi F, García-Consuegra I, Martín MA, Arenas J, Barrientos A, Ugalde C (2012). Mitochondrial complex I plays an essential role in human respirasome assembly. Cell Metab 15, 324-335.
25. Perez-Martinez X, Broadley SA, Fox TD (2003). Mss51p promotes mitochondrial Cox1p synthesis and interacts with newly synthesized Cox1p. EMBO J 22, 5951-5961.
26. Perez-Martinez X, Butler CA, Shingu-Vazquez M, Fox TD (2009). Dual functions of Mss51 couple synthesis of Cox1 to assembly of cytochrome c oxidase in Saccharomyces cerevisiae mitochondria. Mol Biol Cell 20, 4371-4380.
27. Pierrel F, Bestwick ML, Cobine PA, Khalimonchuk O, Cricco JA, Winge DR (2007). Coa1 links the Mss51 post-translational function to Cox1 cofactor insertion in cytochrome c oxidase assembly. EMBO J 26, 4335-4346.
28. Pierrel F, Khalimonchuk O, Cobine PA, Bestwick M, Winge DR (2008). Coa2 is an assembly factor for yeast cytochrome c oxidase biogenesis that facilitates the maturation of Cox1. Mol Cell Biol 28, 4927-4939.
29. Rak M, Gokova S, Tzagoloff A (2011). Modular assembly of yeast mitochondrial ATP synthase. EMBO J 30, 920-930.
30. Rothstein RJ (1983). One-step gene disruption in yeast. Methods Enzymol 101, 202-211.
31. Sambrook J, Fritsch EF, Maniatis T (1989). Molecular Cloning: A Laboratory Manual, Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
32. Schiestl RH, Gietz RD (1989). High efficiency transformation of intact yeast cells using single stranded nucleic acids as a carrier. Curr Genet 16, 339-346.
33. Soto IC, Fontanesi F, Liu J, Barrientos A (2012). Biogenesis and assembly of eukaryotic cytochrome c oxidase catalytic core. Biochim Biophys Acta 1817, 883-897.
34. Steele DF, Butler CA, Fox TD (1996). Expression of a recoded nuclear gene inserted into yeast mitochondrial DNA is limited by mRNA-specific translational activation. Proc Natl Acad Sci USA 93, 5253-5257.
35. Strogolova V, Furness A, Robb-McGrath M, Garlich J, Stuart RA (2012). Rcf1 and Rcf2, members of the hypoxia-induced gene 1 protein family, are critical components of the mitochondrial cytochrome bc1-cytochrome c oxidase supercomplex. Mol Cell Biol 32, 1363-1373.
36. Tsukihara T, Aoyama H, Yamashita E, Tomizaki T, Yamaguchi H, Shinzawa-Itoh K, Nakashima R, Yaono R, Yoshikawa S (1996). The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 A. Science 272, 1136-1144.
37. Tzagoloff A, Barrientos A, Neupert W, Herrmann JM (2004). Atp10p assists assembly of Atp6p into the F0 unit of the yeast mitochondrial ATPase. J Biol Chem 279, 19775-19780.
38. Wittig I, Braun HP, Schagger H (2006). Blue native PAGE. Nat Protoc 1, 418-428.
39. Zeng X, Barros MH, Shulman T, Tzagoloff A (2008). ATP25, a new nuclear gene of Saccharomyces cerevisiae required for expression and assembly of the Atp9p subunit of mitochondrial ATPase. Mol Biol Cell 19, 1366-1377.