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Volumn 29, Issue 4, 2013, Pages 528-531

A comprehensive SNP and indel imputability database

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; ASIAN; COMPUTER PROGRAM; GENE FREQUENCY; GENETIC ASSOCIATION; GENETICS; GENOME; GENOTYPE; HUMAN; INDEL MUTATION; NUCLEIC ACID DATABASE; PHILIPPINES; SINGLE NUCLEOTIDE POLYMORPHISM;

EID: 84874316009     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts724     Document Type: Article
Times cited : (16)

References (25)
  • 1
    • 79954614472 scopus 로고    scopus 로고
    • Cohort profile: The Cebu longitudinal health and nutrition survey
    • Adair, L.S. et al. (2011) Cohort profile: the Cebu longitudinal health and nutrition survey. Int. J. Epidemiol., 40, 619-625.
    • (2011) Int. J. Epidemiol , vol.40 , pp. 619-625
    • Adair, L.S.1
  • 2
    • 71149112981 scopus 로고    scopus 로고
    • Simultaneous genotype calling and haplotype phasing improves genotype accuracy and reduces false-positive associations for genome-wide association studies
    • Browning, B.L. and Yu, Z. (2009) Simultaneous genotype calling and haplotype phasing improves genotype accuracy and reduces false-positive associations for genome-wide association studies. Am. J. Hum. Genet., 85, 847-861.
    • (2009) Am. J. Hum. Genet , vol.85 , pp. 847-861
    • Browning, B.L.1    Yu, Z.2
  • 3
    • 84855393631 scopus 로고    scopus 로고
    • Population-specific coding variant underlies genome-wide association with adiponectin level
    • Croteau-Chonka, D.C. et al. (2012) Population-specific coding variant underlies genome-wide association with adiponectin level. Hum. Mol. Genet., 21, 463-471.
    • (2012) Hum. Mol. Genet , vol.21 , pp. 463-471
    • Croteau-Chonka, D.C.1
  • 4
    • 77952363272 scopus 로고    scopus 로고
    • Chromosome 9p21 SNPs associated with multiple disease phenotypes correlate with ANRIL expression
    • Cunnington, M.S. et al. (2010) Chromosome 9p21 SNPs associated with multiple disease phenotypes correlate with ANRIL expression. PLoS Genet., 6, e1000899.
    • (2010) PLoS Genet , vol.6
    • Cunnington, M.S.1
  • 5
    • 80052736294 scopus 로고    scopus 로고
    • A variant in MCF2L is associated with osteoarthritis
    • Day-Williams, A. et al. (2011) A variant in MCF2L is associated with osteoarthritis. Am. J. Hum. Genet., 89, 446-450.
    • (2011) Am. J. Hum. Genet , vol.89 , pp. 446-450
    • Day-Williams, A.1
  • 6
    • 77956197018 scopus 로고    scopus 로고
    • Utilizing genotype imputation for the augmentation of sequence data
    • Fridley, B.L. et al. (2010) Utilizing genotype imputation for the augmentation of sequence data. PloS ONE, 5, e11018.
    • (2010) PloS ONE , vol.5
    • Fridley, B.L.1
  • 8
    • 84864417548 scopus 로고    scopus 로고
    • Fast and accurate genotype imputation in genome-wide association studies through pre-phasing
    • Howie, B. et al. (2012) Fast and accurate genotype imputation in genome-wide association studies through pre-phasing. Nat. Genet., 44, 955-959.
    • (2012) Nat. Genet , vol.44 , pp. 955-959
    • Howie, B.1
  • 9
    • 79953212557 scopus 로고    scopus 로고
    • A rare variant in MYH6 is associated with high risk of sick sinus syndrome
    • Holm, H. et al. (2011) A rare variant in MYH6 is associated with high risk of sick sinus syndrome. Nat. Genet., 43, 316-320.
    • (2011) Nat. Genet , vol.43 , pp. 316-320
    • Holm, H.1
  • 10
    • 84863724842 scopus 로고    scopus 로고
    • 1000 Genomes-based imputation identifies novel and refined associations for the. Wellcome Trust Case Control Consortium phase 1 Data
    • Huang, J. et al. (2012) 1000 Genomes-based imputation identifies novel and refined associations for the. Wellcome Trust Case Control Consortium phase 1 Data. Eur. J. Hum. Genet., 20, 801-805.
    • (2012) Eur. J. Hum. Genet , vol.20 , pp. 801-805
    • Huang, J.1
  • 11
    • 77952469251 scopus 로고    scopus 로고
    • Genome-wide association study of homocysteine levels in Filipinos provides evidence for CPS1 in women and a stronger MTHFR effect in young adults
    • Lange, L.A. et al. (2010) Genome-wide association study of homocysteine levels in Filipinos provides evidence for CPS1 in women and a stronger MTHFR effect in young adults. Hum. Mol. Genet., 19, 2050-2058.
    • (2010) Hum. Mol. Genet , vol.19 , pp. 2050-2058
    • Lange, L.A.1
  • 12
    • 80052877813 scopus 로고    scopus 로고
    • Performance of genotype imputation for rare variants identified in exons and flanking regions of genes
    • Li, L. et al. (2011a) Performance of genotype imputation for rare variants identified in exons and flanking regions of genes. PloS ONE, 6, e24945.
    • (2011) PloS ONE , vol.6
    • Li, L.1
  • 13
    • 0347361674 scopus 로고    scopus 로고
    • Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism data
    • Li, N. and Stephens, M. (2003) Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism data. Genetics, 165, 2213-2233.
    • (2003) Genetics , vol.165 , pp. 2213-2233
    • Li, N.1    Stephens, M.2
  • 14
    • 70350231628 scopus 로고    scopus 로고
    • Genotype imputation
    • Li, Y. et al. (2009) Genotype imputation. Ann. Rev. Genomics Hum. Genet., 10, 387-406.
    • (2009) Ann. Rev. Genomics Hum. Genet , vol.10 , pp. 387-406
    • Li, Y.1
  • 15
    • 79957951017 scopus 로고    scopus 로고
    • Low-coverage sequencing: Implications for design of complex trait association studies
    • Li, Y. et al. (2011b) Low-coverage sequencing: implications for design of complex trait association studies. Genome Res., 21, 940-951.
    • (2011) Genome Res , vol.21 , pp. 940-951
    • Li, Y.1
  • 16
    • 78649508578 scopus 로고    scopus 로고
    • MaCH: Using sequence and genotype data to estimate haplotypes and unobserved genotypes
    • Li, Y. et al. (2010)MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypes. Genet. Epidemiol., 34, 816-834.
    • (2010) Genet. Epidemiol , vol.34 , pp. 816-834
    • Li, Y.1
  • 17
    • 84859120701 scopus 로고    scopus 로고
    • Genotype imputation of metabochip SNPs using a study-specific reference panel of 4 000 haplotypes in African Americans from the women's health initiative
    • Liu, E.Y. et al. (2012a) Genotype imputation of metabochip SNPs using a study-specific reference panel of-4, 000 haplotypes in African Americans from the women's health initiative. Genet. Epidemiol., 117, 107-117.
    • (2012) Genet. Epidemiol , vol.117 , pp. 107-117
    • Liu, E.Y.1
  • 18
    • 84874320546 scopus 로고    scopus 로고
    • MaCH-admix: Genotype imputation for admixed populations
    • 00
    • Liu, E.Y. et al. (2012b) MaCH-admix: genotype imputation for admixed populations. Genet. Epidemiol., 00, 1-13.
    • (2012) Genet. Epidemiol , pp. 1-13
    • Liu, E.Y.1
  • 19
    • 77953808087 scopus 로고    scopus 로고
    • Genotype imputation for genome-wide association studies. Nature reviews
    • Marchini, J. and Howie, B. (2010) Genotype imputation for genome-wide association studies. Nature reviews. Genetics, 11, 499-511.
    • (2010) Genetics , vol.11 , pp. 499-511
    • Marchini, J.1    Howie, B.2
  • 20
    • 34548581977 scopus 로고    scopus 로고
    • Comparison of ENCODE region SNPs between Cebu Filipino and Asian HapMap samples
    • Marvelle, A.F. et al. (2007) Comparison of ENCODE region SNPs between Cebu Filipino and Asian HapMap samples. J. Hum. Genet., 52, 729-737.
    • (2007) J. Hum. Genet , vol.52 , pp. 729-737
    • Marvelle, A.F.1
  • 21
    • 34249996115 scopus 로고    scopus 로고
    • A common allele on chromosome 9 associated with coronary heart disease
    • McPherson, R. et al. (2007) A common allele on chromosome 9 associated with coronary heart disease. Science, 316, 1488-1491.
    • (2007) Science , vol.316 , pp. 1488-1491
    • McPherson, R.1
  • 22
    • 84860316355 scopus 로고    scopus 로고
    • A two-platform design for next generation genome-wide association studies
    • Sampson, J.N. et al. (2012) A two-platform design for next generation genome-wide association studies. Genet. Epidemiol., 36, 400-408.
    • (2012) Genet. Epidemiol , vol.36 , pp. 400-408
    • Sampson, J.N.1
  • 23
    • 84975742565 scopus 로고    scopus 로고
    • A map of human genome variation from population-scale sequencing
    • The 1000 Genomes Project Consortium
    • The 1000 Genomes Project Consortium. (2010) A map of human genome variation from population-scale sequencing. Nature, 467, 1061-1073.
    • (2010) Nature , vol.467 , pp. 1061-1073
  • 24
    • 77956331627 scopus 로고    scopus 로고
    • Integrating common and rare genetic variation in diverse human populations
    • The International HapMap 3 Consortium
    • The International HapMap 3 Consortium. (2010) Integrating common and rare genetic variation in diverse human populations. Nature, 467, 52-58.
    • (2010) Nature , vol.467 , pp. 52-58
  • 25
    • 78751490178 scopus 로고    scopus 로고
    • A comparison of approaches to account for uncertainty in analysis of imputed genotypes
    • Zheng, J. et al. (2011) A comparison of approaches to account for uncertainty in analysis of imputed genotypes. Genet. Epidemiol., 35, 102-110.
    • (2011) Genet. Epidemiol , vol.35 , pp. 102-110
    • Zheng, J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.