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Volumn 29, Issue 4, 2013, Pages 494-496

NGSUtils: A software suite for analyzing and manipulating next-generation sequencing datasets

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; COMPUTER PROGRAM; GENOMICS; HIGH THROUGHPUT SEQUENCING; METHODOLOGY;

EID: 84874312025     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts731     Document Type: Article
Times cited : (187)

References (9)
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    • Cock, P.J.A.1
  • 2
    • 79960405019 scopus 로고    scopus 로고
    • The variant call format and VCFtools
    • Danecek, P. et al. (2011) The variant call format and VCFtools. Bioinformatics, 27, 2156-2158.
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    • The human genome browser at UCSC
    • Kent, W.J. et al. (2002) The human genome browser at UCSC. Genome Res., 12, 996-1006.
    • (2002) Genome Res , vol.12 , pp. 996-1006
    • Kent, W.J.1
  • 4
    • 68549104404 scopus 로고    scopus 로고
    • The sequence alignment/map format and SAMtools
    • Li, H. et al. (2009) The sequence alignment/map format and SAMtools. Bioinformatics, 25, 2078-2079.
    • (2009) Bioinformatics , vol.25 , pp. 2078-2079
    • Li, H.1
  • 5
    • 46249106990 scopus 로고    scopus 로고
    • Mapping and quantifying mammalian transcriptomes by RNA-Seq
    • Mortazavi, A. et al. (2008) Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nat. Methods, 5, 621-628.
    • (2008) Nat. Methods , vol.5 , pp. 621-628
    • Mortazavi, A.1
  • 6
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    • BEDTools: A flexible suite of utilities for comparing genomic features
    • Quinlan, A.R. and Hall, I.M. (2010) BEDTools: a flexible suite of utilities for comparing genomic features. Bioinformatics, 26, 841-842.
    • (2010) Bioinformatics , vol.26 , pp. 841-842
    • Quinlan, A.R.1    Hall, I.M.2
  • 7
    • 67650908913 scopus 로고    scopus 로고
    • Managing and analyzing next-generation sequence data
    • Richter, B.G. and Sexton, D.P. (2009) Managing and analyzing next-generation sequence data. PLoS Comput. Biol., 5, e1000369.
    • (2009) PLoS Comput. Biol , vol.5
    • Richter, B.G.1    Sexton, D.P.2
  • 9
    • 0019887799 scopus 로고
    • Identification of common molecular subsequences
    • Smith, T.F. and Waterman, M.S. (1981) Identification of common molecular subsequences. J. Mol. Biol., 147, 195-197.
    • (1981) J. Mol. Biol , vol.147 , pp. 195-197
    • Smith, T.F.1    Waterman, M.S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.