Spin: Development of sample-specific protein integrity numbers as an index of biospecimen quality

Biopreservation and Biobanking

Volumn 11, Issue 1, 2013, Pages 25-32

  Geddes, Timothy J ^a   Ahmed, Samreen ^a   Pruetz, Barbara L ^a   Larson, Dianna M ^a   Thibodeau, Bryan J ^a   Akervall, Jan ^a   Wilson, George D ^a  

^a WILLIAM BEAUMONT HOSPITAL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL MARKER; RNA; PROTEIN;

BLOOD SAMPLING; CLINICAL RESEARCH; CONFERENCE PAPER; HEALTH CARE FACILITY; PRIORITY JOURNAL; PROTEIN DEGRADATION; QUALITY CONTROL; REPRODUCIBILITY; SURFACE ENHANCED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; TISSUE SECTION; URINALYSIS; VALIDITY; BLOOD; CLUSTER ANALYSIS; HUMAN; MASS SPECTROMETRY; METABOLISM; PATHOLOGY; STANDARDS; TEMPERATURE; THYROID GLAND; THYROID TUMOR; URINE;

BIOLOGICAL MARKERS; BIOLOGICAL SPECIMEN BANKS; CLUSTER ANALYSIS; HUMANS; PROTEINS; QUALITY CONTROL; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; TEMPERATURE; THYROID GLAND; THYROID NEOPLASMS;

EID: 84874300338     PISSN: 19475535     EISSN: 19475543     Source Type: Journal    
DOI: 10.1089/bio.2012.0039     Document Type: Conference Paper

References (15)

1. Bernard AM. Biokinetics and stability aspects of biomarkers: Recommendations for application in population studies. Toxicology 1995;101:65-71.
2. Riegman PH, Morente MM, Betsou F, et al. Biobanking for better healthcare. Mol Oncol 2008;2:213-222.
3. Paltiel L, Ronningen KS, Meltzer HM, et al. Evaluation of freeze thaw cycles on stored plasma in the biobank of the Norwegian Mother and Child Cohort Study. Cell Preserv Technol 2008;6:223-230.
4. Bolelli G, Muti P, Micheli A, et al. Validity for epidemiological studies of long-term cryoconservation of steroid and protein hormones in serum and plasma. Cancer Epidemiol Biomarkers Prev 1995;4:509-513.
5. Wahrendorf J, Hanck AB, Munoz N, et al. Vitamin measurements in pooled blood samples. Am J Epidemiol 1986;123:544-550. (Pubitemid 16101158)
6. Cuypers HT, Bresters D, Winkel IN, et al. Storage conditions of blood samples and primer selection affect the yield of cDNA polymerase chain reaction products of hepatitis C virus. J Clin Microbiol 1992;30:3220-3224.
7. Panicker G, Meadows KS, Lee DR, et al. Effect of storage temperatures on the stability of cytokines in cervical mucous. Cytokine 2007;37:176-179. (Pubitemid 46694341)
8. Evans MJ, Livesey JH, Ellis MJ, et al. Effect of anticoagulants and storage temperatures on stability of plasma and serum hormones. Clin Biochem 2001;34:107-112. (Pubitemid 32322701)
9. Fetsch PA, Simone NL, Bryant-Greenwood PK, et al. Proteomic evaluation of archival cytologic material using SELDI affinity mass spectrometry: Potential for diagnostic applications. Am J Clin Pathol 2002;118:870-876. (Pubitemid 37047827)
10. Traum AZ, Wells MP, Aivado M, et al. SELDI-TOF MS of quadruplicate urine and serum samples to evaluate changes related to storage conditions. Proteomics 2006;6:1676-1680.
11. Bouamrani A, Ternier J, Ratel D, et al. Direct-tissue SELDI-TOF mass spectrometry analysis: A new application for clinical proteomics. Clin Chem 2006;52:2103-2106. (Pubitemid 44658214)
12. Becker CH, Bern M. Recent developments in quantitative proteomics. Mutat Res 722:171-182.
13. Skold K, Svensson M, Norrman M, et al. The significance of biochemical and molecular sample integrity in brain proteomics and peptidomics: Stathmin 2-20 and peptides as sample quality indicators. Proteomics 2007;7:4445-4456.
14. Timms JF, Arslan-Low E, Gentry-Maharaj A, et al. Preanalytic influence of sample handling on SELDI-TOF serum protein profiles. Clin Chem 2007;53:645-656. (Pubitemid 46580234)
15. Haeberle S, Zengerle R. Microfluidic platforms for lab-on-a-chip applications. Lab Chip 2007;7:1094-1110. (Pubitemid 47295976)