-
1
-
-
84866742932
-
A beginners guide to SNP calling from high-throughput DNA-sequencing data
-
Altmann A, Weber P, Bader D, Preuss M, Binder EB, et al. (2012) A beginners guide to SNP calling from high-throughput DNA-sequencing data. Hum Genet 131: 1541-1554.
-
(2012)
Hum Genet
, vol.131
, pp. 1541-1554
-
-
Altmann, A.1
Weber, P.2
Bader, D.3
Preuss, M.4
Binder, E.B.5
-
2
-
-
84861886324
-
SNPs as Supplements in Simple Kinship Analysis or as Core Markers in Distant Pairwise Relationship Tests: When Do SNPs Add Value or Replace Well-Established and Powerful STR Tests?
-
Phillips C, Garcia-Magarinos M, Salas A, Carracedo A, Lareu MV, (2012) SNPs as Supplements in Simple Kinship Analysis or as Core Markers in Distant Pairwise Relationship Tests: When Do SNPs Add Value or Replace Well-Established and Powerful STR Tests? Transfus Med Hemother 39: 202-210.
-
(2012)
Transfus Med Hemother
, vol.39
, pp. 202-210
-
-
Phillips, C.1
Garcia-Magarinos, M.2
Salas, A.3
Carracedo, A.4
Lareu, M.V.5
-
4
-
-
84866378702
-
The role of mutations in epigenetic regulators in myeloid malignancies
-
Shih AH, Abdel-Wahab O, Patel JP, Levine RL, (2012) The role of mutations in epigenetic regulators in myeloid malignancies. Nat Rev Cancer 12: 599-612.
-
(2012)
Nat Rev Cancer
, vol.12
, pp. 599-612
-
-
Shih, A.H.1
Abdel-Wahab, O.2
Patel, J.P.3
Levine, R.L.4
-
5
-
-
84858819435
-
Somatic mitochondrial DNA mutations in human cancers
-
Yu M, (2012) Somatic mitochondrial DNA mutations in human cancers. Adv Clin Chem 57: 99-138.
-
(2012)
Adv Clin Chem
, vol.57
, pp. 99-138
-
-
Yu, M.1
-
6
-
-
84865809311
-
Epigenetic changes associated with oocyte aging
-
Liang X, Ma J, Schatten H, Sun Q, (2012) Epigenetic changes associated with oocyte aging. Sci China Life Sci 55: 670-676.
-
(2012)
Sci China Life Sci
, vol.55
, pp. 670-676
-
-
Liang, X.1
Ma, J.2
Schatten, H.3
Sun, Q.4
-
7
-
-
84869876903
-
Detection of cancer-specific epigenomic changes in biofluids: Powerful tools in biomarker discovery and application
-
Nogueira da Costa A, Herceg Z (2012) Detection of cancer-specific epigenomic changes in biofluids: Powerful tools in biomarker discovery and application. Mol Oncol.
-
(2012)
Mol Oncol
-
-
Nogueira da Costa, A.1
Herceg, Z.2
-
8
-
-
84865450581
-
Sensitive periods in epigenetics: bringing us closer to complex behavioral phenotypes
-
Nagy C, Turecki G, (2012) Sensitive periods in epigenetics: bringing us closer to complex behavioral phenotypes. Epigenomics 4: 445-457.
-
(2012)
Epigenomics
, vol.4
, pp. 445-457
-
-
Nagy, C.1
Turecki, G.2
-
9
-
-
0029670262
-
Molecular beacons: probes that fluoresce upon hybridization
-
Tyagi S, Kramer FR, (1996) Molecular beacons: probes that fluoresce upon hybridization. Nat Biotechnol 14: 303-308.
-
(1996)
Nat Biotechnol
, vol.14
, pp. 303-308
-
-
Tyagi, S.1
Kramer, F.R.2
-
10
-
-
28544438039
-
Real-time assays with molecular beacons and other fluorescent nucleic acid hybridization probes
-
Marras SA, Tyagi S, Kramer FR, (2006) Real-time assays with molecular beacons and other fluorescent nucleic acid hybridization probes. Clin Chim Acta 363: 48-60.
-
(2006)
Clin Chim Acta
, vol.363
, pp. 48-60
-
-
Marras, S.A.1
Tyagi, S.2
Kramer, F.R.3
-
11
-
-
58349084656
-
Molecular engineering of DNA: molecular beacons
-
Wang K, Tang Z, Yang CJ, Kim Y, Fang X, et al. (2009) Molecular engineering of DNA: molecular beacons. Angew Chem Int Ed Engl 48: 856-870.
-
(2009)
Angew Chem Int Ed Engl
, vol.48
, pp. 856-870
-
-
Wang, K.1
Tang, Z.2
Yang, C.J.3
Kim, Y.4
Fang, X.5
-
12
-
-
84858698835
-
Recent trends in molecular beacon design and applications
-
Huang K, Marti AA, (2012) Recent trends in molecular beacon design and applications. Anal Bioanal Chem 402: 3091-3102.
-
(2012)
Anal Bioanal Chem
, vol.402
, pp. 3091-3102
-
-
Huang, K.1
Marti, A.A.2
-
13
-
-
84892806894
-
An Elegant Biosensor Molecular Beacon Probe: Challenges and Recent Solutions
-
pages, ID 928783
-
Kolpashchikov DM (2012) An Elegant Biosensor Molecular Beacon Probe: Challenges and Recent Solutions, Scientifica, 2012: 17 pages, ID 928783.
-
(2012)
Scientifica, 2012
, pp. 17
-
-
Kolpashchikov, D.M.1
-
14
-
-
84863707117
-
Signal-on electrochemical Y or junction probe detection of nucleic acid
-
Shen Z, Nakayama S, Semancik S, Sintim HO, (2012) Signal-on electrochemical Y or junction probe detection of nucleic acid. Chem Commun (Camb) 48: 7580-7582.
-
(2012)
Chem Commun (Camb)
, vol.48
, pp. 7580-7582
-
-
Shen, Z.1
Nakayama, S.2
Semancik, S.3
Sintim, H.O.4
-
15
-
-
84861623216
-
A room-temperature adenosine-based molecular beacon for highly sensitive detection of nucleic acids
-
Lin YH, Tseng WL, (2012) A room-temperature adenosine-based molecular beacon for highly sensitive detection of nucleic acids. Chem Commun (Camb) 48: 6262-6264.
-
(2012)
Chem Commun (Camb)
, vol.48
, pp. 6262-6264
-
-
Lin, Y.H.1
Tseng, W.L.2
-
16
-
-
84855832570
-
A polycation-chaperoned in-stem molecular beacon system
-
Asanuma H, Osawa T, Kashida H, Fujii T, Liang X, et al. (2012) A polycation-chaperoned in-stem molecular beacon system. Chem Commun (Camb) 48: 1760-1762.
-
(2012)
Chem Commun (Camb)
, vol.48
, pp. 1760-1762
-
-
Asanuma, H.1
Osawa, T.2
Kashida, H.3
Fujii, T.4
Liang, X.5
-
17
-
-
82355191018
-
Molecular beacon-based half-adder and half-subtractor
-
Yang CN, Hsu CY, Chuang YC, (2012) Molecular beacon-based half-adder and half-subtractor. Chem Commun (Camb) 48: 112-114.
-
(2012)
Chem Commun (Camb)
, vol.48
, pp. 112-114
-
-
Yang, C.N.1
Hsu, C.Y.2
Chuang, Y.C.3
-
18
-
-
84858019925
-
Detection of endogenous K-ras mRNA in living cells at a single base resolution by a PNA molecular beacon
-
Kam Y, Rubinstein A, Nissan A, Halle D, Yavin E, (2012) Detection of endogenous K-ras mRNA in living cells at a single base resolution by a PNA molecular beacon. Mol Pharm 9: 685-693.
-
(2012)
Mol Pharm
, vol.9
, pp. 685-693
-
-
Kam, Y.1
Rubinstein, A.2
Nissan, A.3
Halle, D.4
Yavin, E.5
-
19
-
-
68149169589
-
The method of single-nucleotide variations detection using capillary electrophoresis and molecular beacons
-
Wang J, Wang W, Liu Y, Duo L, Huang L, et al. (2009) The method of single-nucleotide variations detection using capillary electrophoresis and molecular beacons. Mol Biol Rep 36: 1903-1908.
-
(2009)
Mol Biol Rep
, vol.36
, pp. 1903-1908
-
-
Wang, J.1
Wang, W.2
Liu, Y.3
Duo, L.4
Huang, L.5
-
20
-
-
84862910980
-
Molecular beacon-based fluorescence biosensor for the detection of gene fragment and PCR amplification products related to chronic myelogenous leukemia
-
Liu A, Sun Z, Wang K, Chen X, Xu X, et al. (2012) Molecular beacon-based fluorescence biosensor for the detection of gene fragment and PCR amplification products related to chronic myelogenous leukemia. Anal Bioanal Chem 402: 805-812.
-
(2012)
Anal Bioanal Chem
, vol.402
, pp. 805-812
-
-
Liu, A.1
Sun, Z.2
Wang, K.3
Chen, X.4
Xu, X.5
-
21
-
-
84871116172
-
AFM-imaging diagnosis method for single nucleotide polymorphism using molecular beacon DNA as an intramolecular ligation template of target DNA and a viewable indicator
-
Yoshinaga H, Nakano K, Soh N, Imato T, (2012) AFM-imaging diagnosis method for single nucleotide polymorphism using molecular beacon DNA as an intramolecular ligation template of target DNA and a viewable indicator. Anal Sci. 28: 939-945.
-
(2012)
Anal Sci
, vol.28
, pp. 939-945
-
-
Yoshinaga, H.1
Nakano, K.2
Soh, N.3
Imato, T.4
-
22
-
-
84858019925
-
Detection of endogenous K-ras mRNA in living cells at a single base resolution by a PNA molecular beacon
-
Kam Y, Rubinstein A, Nissan A, Halle D, Yavin E, (2012) Detection of endogenous K-ras mRNA in living cells at a single base resolution by a PNA molecular beacon. Mol Pharm. 9: 685-693.
-
(2012)
Mol Pharm
, vol.9
, pp. 685-693
-
-
Kam, Y.1
Rubinstein, A.2
Nissan, A.3
Halle, D.4
Yavin, E.5
-
23
-
-
80052950773
-
Simultaneous detection of intracellular tumor mRNA with bi-color imaging based on a gold nanoparticle/molecular beacon
-
Qiao G, Gao Y, Li N, Yu Z, Zhuo L, et al. (2011) Simultaneous detection of intracellular tumor mRNA with bi-color imaging based on a gold nanoparticle/molecular beacon. Chemistry 17: 11210-11215.
-
(2011)
Chemistry
, vol.17
, pp. 11210-11215
-
-
Qiao, G.1
Gao, Y.2
Li, N.3
Yu, Z.4
Zhuo, L.5
-
24
-
-
78650601509
-
Simultaneous detection of dual single-base mutations by capillary electrophoresis using quantum dot-molecular beacon probe
-
Li YQ, Guan LY, Wang JH, Zhang HL, Chen J, et al. (2011) Simultaneous detection of dual single-base mutations by capillary electrophoresis using quantum dot-molecular beacon probe. Biosens Bioelectron 26: 2317-2322.
-
(2011)
Biosens Bioelectron
, vol.26
, pp. 2317-2322
-
-
Li, Y.Q.1
Guan, L.Y.2
Wang, J.H.3
Zhang, H.L.4
Chen, J.5
-
25
-
-
13644266825
-
Sequence-specific, self-reporting hairpin inversion probes
-
Browne KA, (2005) Sequence-specific, self-reporting hairpin inversion probes. J Am Chem Soc 127: 1989-1994.
-
(2005)
J Am Chem Soc
, vol.127
, pp. 1989-1994
-
-
Browne, K.A.1
-
26
-
-
37549007569
-
Superior structure stability and selectivity of hairpin nucleic acid probes with an L-DNA stem
-
Kim Y, Yang CJ, Tan W, (2007) Superior structure stability and selectivity of hairpin nucleic acid probes with an L-DNA stem. Nucleic Acids Res 35: 7279-7287.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 7279-7287
-
-
Kim, Y.1
Yang, C.J.2
Tan, W.3
-
28
-
-
80555144145
-
Molecular-beacon-based tricomponent probe for SNP analysis in folded nucleic acids
-
Nguyen C, Grimes J, Gerasimova YV, Kolpashchikov DM, (2011) Molecular-beacon-based tricomponent probe for SNP analysis in folded nucleic acids. Chemistry 17: 13052-13058.
-
(2011)
Chemistry
, vol.17
, pp. 13052-13058
-
-
Nguyen, C.1
Grimes, J.2
Gerasimova, Y.V.3
Kolpashchikov, D.M.4
-
29
-
-
33645158637
-
Nanostructured probes for RNA detection in living cells
-
Santangelo P, Nitin N, Bao G, (2006) Nanostructured probes for RNA detection in living cells. Ann Biomed Eng 34: 39-50.
-
(2006)
Ann Biomed Eng
, vol.34
, pp. 39-50
-
-
Santangelo, P.1
Nitin, N.2
Bao, G.3
-
30
-
-
41149172344
-
Target accessibility and signal specificity in live-cell detection of BMP-4 mRNA using molecular beacons
-
Rhee WJ, Santangelo PJ, Jo H, Bao G, (2008) Target accessibility and signal specificity in live-cell detection of BMP-4 mRNA using molecular beacons. Nucleic Acids Res 36: e30.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Rhee, W.J.1
Santangelo, P.J.2
Jo, H.3
Bao, G.4
-
31
-
-
26944491886
-
Molecular beacons as probes of RNA unfolding under native conditions
-
Hopkins JF, Woodson SA, (2005) Molecular beacons as probes of RNA unfolding under native conditions. Nucleic Acids Res 33: 5763-5770.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 5763-5770
-
-
Hopkins, J.F.1
Woodson, S.A.2
-
32
-
-
77955618054
-
A single molecular beacon probe is sufficient for the analysis of multiple nucleic acid sequences
-
Gerasimova YV, Hayson A, Ballantyne J, Kolpashchikov DM, (2010) A single molecular beacon probe is sufficient for the analysis of multiple nucleic acid sequences. Chembiochem 11: 1762-1768.
-
(2010)
Chembiochem
, vol.11
, pp. 1762-1768
-
-
Gerasimova, Y.V.1
Hayson, A.2
Ballantyne, J.3
Kolpashchikov, D.M.4
-
33
-
-
33747619872
-
A binary DNA probe for highly specific nucleic Acid recognition
-
Kolpashchikov DM, (2006) A binary DNA probe for highly specific nucleic Acid recognition. J Am Chem Soc 128: 10625-10628.
-
(2006)
J Am Chem Soc
, vol.128
, pp. 10625-10628
-
-
Kolpashchikov, D.M.1
-
34
-
-
84870790859
-
Detection of bacterial 16S rRNA using a molecular beacon-based X sensor
-
Gerasimova YV, Kolpashchikov DM, (2013) Detection of bacterial 16S rRNA using a molecular beacon-based X sensor. Biosens Bioelectron. 41: 386-390.
-
(2013)
Biosens Bioelectron
, vol.41
, pp. 386-390
-
-
Gerasimova, Y.V.1
Kolpashchikov, D.M.2
-
35
-
-
81555214650
-
DNA nanotechnology for nucleic acid analysis: DX motif-based sensor
-
Kolpashchikov DM, Gerasimova YV, Khan MS, (2011) DNA nanotechnology for nucleic acid analysis: DX motif-based sensor. Chembiochem 12: 2564-2567.
-
(2011)
Chembiochem
, vol.12
, pp. 2564-2567
-
-
Kolpashchikov, D.M.1
Gerasimova, Y.V.2
Khan, M.S.3
-
36
-
-
84865842821
-
Molecular logic gates for DNA analysis: detection of rifampin resistance in M. tuberculosis DNA
-
Cornett EM, Campbell EA, Gulenay G, Peterson E, Bhaskar N, et al. (2012) Molecular logic gates for DNA analysis: detection of rifampin resistance in M. tuberculosis DNA. Angew Chem Int Ed Engl. 51: 9075-9077.
-
(2012)
Angew Chem Int Ed Engl
, vol.51
, pp. 9075-9077
-
-
Cornett, E.M.1
Campbell, E.A.2
Gulenay, G.3
Peterson, E.4
Bhaskar, N.5
-
37
-
-
0027255843
-
DNA double-crossover molecules
-
Fu TJ, Seeman NC, (1993) DNA double-crossover molecules. Biochemistry 32: 3211-3220.
-
(1993)
Biochemistry
, vol.32
, pp. 3211-3220
-
-
Fu, T.J.1
Seeman, N.C.2
-
38
-
-
0442323636
-
Two sides of the coin: affinity and specificity of nucleic acid interactions
-
Demidov VV, Frank-Kamenetskii MD, (2004) Two sides of the coin: affinity and specificity of nucleic acid interactions. Trends Biochem Sci. 29: 62-71.
-
(2004)
Trends Biochem Sci
, vol.29
, pp. 62-71
-
-
Demidov, V.V.1
Frank-Kamenetskii, M.D.2
-
39
-
-
33646557707
-
A multiplex assay with 52 single nucleotide polymorphisms for human identification
-
Sanchez JJ, Phillips C, Borsting C, Balogh K, Bogus M, et al. (2006) A multiplex assay with 52 single nucleotide polymorphisms for human identification. Electrophoresis 27: 1713-1724.
-
(2006)
Electrophoresis
, vol.27
, pp. 1713-1724
-
-
Sanchez, J.J.1
Phillips, C.2
Borsting, C.3
Balogh, K.4
Bogus, M.5
-
40
-
-
84861713751
-
Efficient detection of secondary structure folded nucleic acids related to Alzheimer's disease based on junction probes
-
Li J, Qi XJ, Du YY, Fu HE, Chen GN, Yang HH, (2012) Efficient detection of secondary structure folded nucleic acids related to Alzheimer's disease based on junction probes. Biosens Bioelectron. 36: 142-146.
-
(2012)
Biosens Bioelectron
, vol.36
, pp. 142-146
-
-
Li, J.1
Qi, X.J.2
Du, Y.Y.3
Fu, H.E.4
Chen, G.N.5
Yang, H.H.6
-
41
-
-
68549112871
-
Molecular diagnostics in tuberculosis: basis and implications for therapy
-
Balasingham SV, Davidsen T, Szpinda I, Frye SA, Tonjum T, (2009) Molecular diagnostics in tuberculosis: basis and implications for therapy. Mol Diagn Ther 13: 137-151.
-
(2009)
Mol Diagn Ther
, vol.13
, pp. 137-151
-
-
Balasingham, S.V.1
Davidsen, T.2
Szpinda, I.3
Frye, S.A.4
Tonjum, T.5
-
42
-
-
84870837985
-
Dental diagnostics: molecular analysis of oral biofilms
-
Hiyari S, Bennett KM, (2011) Dental diagnostics: molecular analysis of oral biofilms. J Dent Hyg 85: 256-263.
-
(2011)
J Dent Hyg
, vol.85
, pp. 256-263
-
-
Hiyari, S.1
Bennett, K.M.2
-
44
-
-
34248190165
-
Saliva-based diagnostics using 16S rRNA microarrays and microfluidics
-
Starke EM, Smoot JC, Wu JH, Liu WT, Chandler D, et al. (2007) Saliva-based diagnostics using 16S rRNA microarrays and microfluidics. Ann N Y Acad Sci 1098: 345-361.
-
(2007)
Ann N Y Acad Sci
, vol.1098
, pp. 345-361
-
-
Starke, E.M.1
Smoot, J.C.2
Wu, J.H.3
Liu, W.T.4
Chandler, D.5
-
45
-
-
0038558598
-
Sequence versus structure for the direct detection of 16S rRNA on planar oligonucleotide microarrays
-
Chandler DP, Newton GJ, Small JA, Daly DS, (2003) Sequence versus structure for the direct detection of 16S rRNA on planar oligonucleotide microarrays. Appl Environ Microbiol 69: 2950-2958.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 2950-2958
-
-
Chandler, D.P.1
Newton, G.J.2
Small, J.A.3
Daly, D.S.4
-
46
-
-
7444246694
-
Amplicon secondary structure prevents target hybridization to oligonucleotide microarrays
-
Lane S, Evermann J, Loge F, Call DR, (2004) Amplicon secondary structure prevents target hybridization to oligonucleotide microarrays. Biosens Bioelectron 20: 728-735.
-
(2004)
Biosens Bioelectron
, vol.20
, pp. 728-735
-
-
Lane, S.1
Evermann, J.2
Loge, F.3
Call, D.R.4
|