Electrochemical biosensing method for the detection of DNA methylation and assay of the methyltransferase activity

Sensors and Actuators, B: Chemical

Volumn 178, Issue , 2013, Pages 412-417

  Xu, Zhenning ^a   Wang, Mo ^a   Zhou, Tingting ^a   Yin, Huanshun ^a   Ai, Shiyun ^a  

^a SHANDONG AGRICULTURAL UNIVERSITY   (China)

Author keywords

Differential pulse voltammetry; DNA methylation; Methylene blue; Methyltransferase

Indexed keywords

DIFFERENTIAL PULSE VOLTAMMETRY; DNA METHYLATION; DNA METHYLTRANSFERASES; ELECTROCHEMICAL BIOSENSING; ELECTROCHEMICAL METHODS; ELECTROCHEMICAL SIGNALS; ENDONUCLEASES; METHYLENE BLUE; METHYLTRANSFERASE ACTIVITY; METHYLTRANSFERASES; VOLTAMMETRIC SIGNALS;

ALKYLATION; AROMATIC COMPOUNDS; DNA; METHYLATION; SIGNAL DETECTION; VOLTAMMETRY;

CHEMICAL DETECTION;

EID: 84873868408     PISSN: 09254005     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.snb.2012.12.124     Document Type: Article

References (33)

1. C. Frauer, and H. Leonhardt Twists and turns of DNA methylation Proceedings of the National Academy of Science 108 2011 8919 8920
2. J.S. Choy, S. Wei, J.Y. Lee, S. Tan, S. Chu, and T.H. Lee DNA methylation increases nucleosome compaction and rigidity Journal of the American Chemical Society 132 2010 1782 1783
3. A. Jeltsch, R.Z. Jurkowska, T.P. Jurkowski, K. Liebert, P. Rathert, and M. Schlickenrieder Application of DNA methyltransferases in targeted DNA methylation Applied Microbiology and Biotechnology 75 2007 1233 1240 (Pubitemid 46976679)
4. J. Lewandowska, and A. Bartoszek DNA methylation in cancer development, diagnosis and therapy - multiple opportunities for genotoxic agents to act as methylome disruptors or remediators Mutagenesis 26 2011 475 487
5. P. Wang, Z. Mai, Z. Dai, and X. Zou Investigation of DNA methylation by direct electrocatalytic oxidation Chemical Communications 46 2010 7781 7783
6. M. Ehrlich DNA methylation in cancer: too much, but also too little Oncogene 21 2002 5400 5413 (Pubitemid 34983477)
7. P.A. Jones, and P.W. Laird Cancer-epigenetics comes of age Nature Genetics 21 1999 163 167
8. J.G. Herman, and S.B. Baylin Gene silencing in cancer in association with promoter hypermethylation New England Journal of Medicine 349 2003 2042 2054 (Pubitemid 37448928)
9. M. Esteller CpG island hypermethylation and tumor suppressor genes: a booming present, a brighter future Oncogene 21 2002 5427 5440 (Pubitemid 34983479)
10. J.R. Horton, K. Liebert, M. Bekes, A. Jeltsch, and X. Cheng Structure and substrate recognition of the Escherichia coli DNA adenine methyltransferase Journal of Molecular Biology 358 2006 559 570
11. X. Ouyang, J. Liu, J. Li, and R. Yang A carbon nanoparticle-based low-background biosensing platform for sensitive and label-free fluorescent assay of DNA methylation Chemical Communications 48 2012 88 90
12. J.G. Herman, J.R. Graff, S. Myöhänen, B.D. Nelkin, and S.B. Baylin Methylation-specific PCR: a novel PCR assay for methylation status of CpG islands Proceedings of the National Academy of Science 93 1996 9821 9826 (Pubitemid 26296693)
13. Z. Dai, X. Hu, H. Wu, and X. Zou A label-free electrochemical assay for quantification of gene-specific methylation in a nucleic acid sequence Chemical Communications 48 2012 1769 1771
14. J. Hu, and C. Zhang Single base extension reaction-based surface enhanced Raman spectroscopy for DNA methylation assay Biosensors and Bioelectronics 31 2011 451 457
15. J.D. Suter, D.J. Howard, H. Shi, C.W. Caldwell, and X. Fan Label-free DNA methylation analysis using opto-fluidic ring resonators Biosensors and Bioelectronics 26 2010 1016 1020
16. S. Pan, J. Xu, Y. Shu, F. Wang, W. Xia, Q. Ding, T. Xu, C. Zhao, M. Zhang, and P. Huang Double recognition of oligonucleotide and protein in the detection of DNA methylation with surface plasmon resonance biosensors Biosensors and Bioelectronics 26 2010 850 853
17. Z. Wu, J. Luo, Q. Ge, and Z. Lu Microarray-based Ms-SNuPE: near-quantitative analysis for a high-throughput DNA methylation Biosensors and Bioelectronics 23 2008 1333 1339
18. Y. Wan, Y. Wang, J.F. Luo, and Z.H. Lu Bisulfite modification of immobilized DNAs for methylation detection Biosensors and Bioelectronics 22 2007 2415 2421 (Pubitemid 46484227)
19. F. Feng, H. Wang, L. Han, and S. Wang Fluorescent conjugated polyelectrolyte as an indicator for convenient detection of DNA methylation Journal of the American Chemical Society 130 2008 11338 11343
20. X. Wang, Y. Song, M. Song, Z. Wang, T. Li, and H. Wang Fluorescence polarization combined capillary electrophoresis immunoassay for the sensitive detection of genomic DNA methylation Analytical Chemistry 81 2009 7885 7891
21. J. Li, H. Yan, K. Wang, W. Tan, and X. Zhou Hairpin fluorescence DNA probe for real-time monitoring of DNA methylation Analytical Chemistry 79 2007 1050 1056
22. T. Liu, J. Zhao, D. Zhang, and G. Li Novel method to detect DNA methylation using gold nanoparticles coupled with enzyme-linkage reactions Analytical Chemistry 82 2009 229 233
23. C. Ge, Z. Fang, J. Chen, J. Liu, X. Lu, and L. Zeng A simple colorimetric detection of DNA methylation Analyst 137 2012 2032 2035
24. Y. Li, C. Huang, J. Zheng, and H. Qi Electrogenerated chemiluminescence biosensing method for the detection of DNA methylation and assay of the methyltransferase activity Biosensors and Bioelectronics 38 2012 407 410
25. R. Kurita, K. Arai, K. Nakamoto, D. Kato, and O. Niwa Determination of DNA methylation using electrochemiluminescence with surface accumulable coreactant Analytical Chemistry 84 2012 1799 1803
26. K. Goto, D. Kato, N. Sekioka, A. Ueda, S. Hirono, and O. Niwa Direct electrochemical detection of DNA methylation for retinoblastoma and CpG fragments using a nanocarbon film Analytical Biochemistry 405 2010 59 66
27. S. Liu, P. Wu, W. Li, H. Zhang, and C. Cai An electrochemical approach for detection of DNA methylation and assay of the methyltransferase activity Chemical Communications 47 2011 2844 2846
28. H. Wu, S. Liu, J.H. Jiang, G.L. Shen, and R. Yu A sensitive electrochemical biosensor for DNA methyltransferase activity by combining DNA methylation-sensitive cleavage and terminal transferase-mediated extension Chemical Communications 48 2012 6280 6282
29. J. Su, X. He, Y. Wang, K. Wang, Z. Chen, and G. Yan A sensitive signal-on assay for MTase activity based on methylation-responsive hairpin-capture DNA probe Biosensors and Bioelectronics 36 2012 123 128
30. X. He, J. Su, Y. Wang, K. Wang, X. Ni, and Z. Chen A sensitive signal-on electrochemical assay for MTase activity using AuNPs amplification Biosensors and Bioelectronics 28 2011 298 303
31. M. Wang, Z. Xu, L. Chen, H. Yin, and S. Ai An electrochemical immunosensing platform for DNA methyltransferase activity analysis and inhibitor screening Analytical Chemistry 84 2012 9072 9078
32. G. Song, C. Chen, J. Ren, and X. Qu A simple, universal colorimetric assay for endonuclease/methyltransferase activity and inhibition based on an enzyme-responsive nanoparticle system ACS Nano 3 2009 1183 1189
33. B. Brueckner, R. Garcia Boy, P. Siedlecki, T. Musch, H.C. Kliem, P. Zielenkiewicz, S. Suhai, M. Wiessler, and F. Lyko Epigenetic reactivation of tumor suppressor genes by a novel small-molecule inhibitor of human DNA methyltransferases Cancer Research 65 2005 6305 6311 (Pubitemid 40994416)