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Volumn 8, Issue 1, 2013, Pages

Genome Anchored QTLs for Biomass Productivity in Hybrid Populus Grown under Contrasting Environments

Author keywords

[No Author keywords available]

Indexed keywords

AFLP GENE; ARTICLE; BIOMASS PRODUCTION; ENVIRONMENTAL CHANGE; GENE; GENE DUPLICATION; GENE IDENTIFICATION; GENE LOCATION; GENETIC LINKAGE; GENETIC MARKER; GENETIC TRAIT; GENOME ANALYSIS; MOLECULAR INTERACTION; NONHUMAN; PHENOTYPE; PLANT GENOME; PLANT GROWTH; PLANT HEIGHT; POPULUS TRICHOCARPA; PROGENY; QUANTITATIVE TRAIT LOCUS; RAPD GENE; SEQUENCE HOMOLOGY; SSR GENE;

EID: 84873839313     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0054468     Document Type: Article
Times cited : (17)

References (31)
  • 1
    • 0023526184 scopus 로고
    • Hardwood energy crops: The technology of intensive culture
    • Ranney JW, Wright LL, Layton PA, (1987) Hardwood energy crops: The technology of intensive culture. Journal of Forestry 85: 17-28.
    • (1987) Journal of Forestry , vol.85 , pp. 17-28
    • Ranney, J.W.1    Wright, L.L.2    Layton, P.A.3
  • 2
    • 0025797704 scopus 로고
    • Improved yields of biomass
    • Abelson PH, (1991) Improved yields of biomass. Science 252: 1469.
    • (1991) Science , vol.252 , pp. 1469
    • Abelson, P.H.1
  • 3
    • 0001836564 scopus 로고    scopus 로고
    • Trends in poplar culture: some global and regional perspectives
    • Stettler RF, Bradshaw HD Jr, Heilman PE, Hinckley TM eds, Ottawa, ON, Canada: NRC Research Press, National Research Council of Canada
    • Zsuffa L, Giordano E, Pryor LD, Stettler RF (1996) Trends in poplar culture: some global and regional perspectives. In: Stettler RF, Bradshaw HD Jr, Heilman PE, Hinckley TM eds. Biology of Populus and its implications for management and conservation. Ottawa, ON, Canada: NRC Research Press, National Research Council of Canada. Pp. 515-539.
    • (1996) Biology of Populus and its implications for management and conservation , pp. 515-539
    • Zsuffa, L.1    Giordano, E.2    Pryor, L.D.3    Stettler, R.F.4
  • 4
    • 0031866687 scopus 로고    scopus 로고
    • Short-rotation woody crop supply systems in the United States: what do we know and what do we need to know?
    • Tuskan GA, (1998) Short-rotation woody crop supply systems in the United States: what do we know and what do we need to know? Biomass Energy 14: 307-315.
    • (1998) Biomass Energy , vol.14 , pp. 307-315
    • Tuskan, G.A.1
  • 6
    • 37249069878 scopus 로고    scopus 로고
    • Extensive allelic variation in gene expression in Populus F1 hybrids
    • Zhuang Y, Adams KL, (2007) Extensive allelic variation in gene expression in Populus F1 hybrids. Genetics 177: 1987-1996.
    • (2007) Genetics , vol.177 , pp. 1987-1996
    • Zhuang, Y.1    Adams, K.L.2
  • 7
    • 0346195899 scopus 로고    scopus 로고
    • Descriptions of clonal characteristics
    • Dickmann DI, Isebrands JG, Eckenwalder JE, Richardson J eds. (2001), Ottawa, ON, Canada: NRC Research Press, National Research Council of Canada
    • Eckenwalder JE (2001) Descriptions of clonal characteristics In: Dickmann DI, Isebrands JG, Eckenwalder JE, Richardson J eds. (2001) Poplar culture in North America 2001. Ottawa, ON, Canada: NRC Research Press, National Research Council of Canada. 331-382.
    • (2001) Poplar culture in North America 2001 , pp. 331-382
    • Eckenwalder, J.E.1
  • 8
    • 0030616703 scopus 로고    scopus 로고
    • Production physiology and morphology of Populus species and their hybrids grown under short rotation II Biomass components and harvest index of hybrid and parental species clones
    • Scarascia-Mugnozza GE, Ceulemans R, Heilman PE, Isebrands JG, Stettler RF, et al. (1997) Production physiology and morphology of Populus species and their hybrids grown under short rotation II Biomass components and harvest index of hybrid and parental species clones. Canadian Journal of Forestry Research 27: 285-294.
    • (1997) Canadian Journal of Forestry Research , vol.27 , pp. 285-294
    • Scarascia-Mugnozza, G.E.1    Ceulemans, R.2    Heilman, P.E.3    Isebrands, J.G.4    Stettler, R.F.5
  • 9
    • 0001848568 scopus 로고    scopus 로고
    • The role of hybridization in the genetic manipulation of Populus
    • Stettler RF, Bradshaw HD Jr, Heilman PE, Hinckley TM eds, Ottawa, ON, Canada: NRC Research Press, National Research Council of Canada
    • Stettler RF, Wu R, Zsuffa L (1996) The role of hybridization in the genetic manipulation of Populus In: Stettler RF, Bradshaw HD Jr, Heilman PE, Hinckley TM eds. Biology of Populus and its implications for management and conservation. Ottawa, ON, Canada: NRC Research Press, National Research Council of Canada. 87-112.
    • (1996) Biology of Populus and its implications for management and conservation , pp. 87-112
    • Stettler, R.F.1    Wu, R.2    Zsuffa, L.3
  • 10
    • 33646469710 scopus 로고    scopus 로고
    • Phenotypic variation and QTL identification for osmotic potential in an interspecific hybrid inbred F2 poplar pedigree growing under contrasting environments
    • Tschaplinski TJ, Tuskan GA, Sewell MM, Gebre GM, Todd DE, et al. (2006) Phenotypic variation and QTL identification for osmotic potential in an interspecific hybrid inbred F2 poplar pedigree growing under contrasting environments. Tree Physiology 26: 595-604.
    • (2006) Tree Physiology , vol.26 , pp. 595-604
    • Tschaplinski, T.J.1    Tuskan, G.A.2    Sewell, M.M.3    Gebre, G.M.4    Todd, D.E.5
  • 11
    • 36448937818 scopus 로고    scopus 로고
    • QTL for yield in bioenergy Populus: identifying GxE interactions from growth at three contrasting sites
    • Rae AM, Pinel MPC, Bastien C, Sabatti M, Street NR, et al. (2008) QTL for yield in bioenergy Populus: identifying GxE interactions from growth at three contrasting sites. Tree Genetics and Genomes 4: 97-112.
    • (2008) Tree Genetics and Genomes , vol.4 , pp. 97-112
    • Rae, A.M.1    Pinel, M.P.C.2    Bastien, C.3    Sabatti, M.4    Street, N.R.5
  • 12
    • 0031019997 scopus 로고    scopus 로고
    • Genetic control of macro- and micro-environmental sensitivities in Populus
    • Wu R, (1997) Genetic control of macro- and micro-environmental sensitivities in Populus. Theoretical Applied Genetics 94: 104-114.
    • (1997) Theoretical Applied Genetics , vol.94 , pp. 104-114
    • Wu, R.1
  • 13
    • 0028190923 scopus 로고
    • Molecular genetics of growth and development in Populus III A genetic linkage map of a hybrid poplar composed of RFLP, STS, and RAPD markers
    • Bradshaw HD Jr, Villar M, Watson BD, Otto KG, Stewart S, et al. (1994) Molecular genetics of growth and development in Populus III A genetic linkage map of a hybrid poplar composed of RFLP, STS, and RAPD markers. Theoretical Applied Genetics 89: 167-178.
    • (1994) Theoretical Applied Genetics , vol.89 , pp. 167-178
    • Bradshaw Jr., H.D.1    Villar, M.2    Watson, B.D.3    Otto, K.G.4    Stewart, S.5
  • 14
    • 0028815909 scopus 로고
    • Molecular genetics of growth and development in Populus IV Mapping QTLs with large effects on growth, form, and phenology traits in a forest tree
    • Bradshaw HD Jr, Stettler RF, (1995) Molecular genetics of growth and development in Populus IV Mapping QTLs with large effects on growth, form, and phenology traits in a forest tree. Genetics 139: 963-973.
    • (1995) Genetics , vol.139 , pp. 963-973
    • Bradshaw Jr., H.D.1    Stettler, R.F.2
  • 15
    • 0031055213 scopus 로고    scopus 로고
    • Quantitative genetics of growth and development in Populus II The partitioning of genotype × environment interaction in stem growth
    • Wu R, Stettler RF, (1997) Quantitative genetics of growth and development in Populus II The partitioning of genotype × environment interaction in stem growth. Heredity 78: 124-134.
    • (1997) Heredity , vol.78 , pp. 124-134
    • Wu, R.1    Stettler, R.F.2
  • 17
    • 65549107375 scopus 로고    scopus 로고
    • Quantitative genetic analysis of biomass and wood chemistry of Populus under different nitrogen levels
    • Novaes E, Osorio L, Drost DR, Miles BL, Boaventura-Novaes CRD, et al. (2009) Quantitative genetic analysis of biomass and wood chemistry of Populus under different nitrogen levels. New Phytologist 182: 878-890.
    • (2009) New Phytologist , vol.182 , pp. 878-890
    • Novaes, E.1    Osorio, L.2    Drost, D.R.3    Miles, B.L.4    Boaventura-Novaes, C.R.D.5
  • 18
    • 33748760611 scopus 로고    scopus 로고
    • The genome of black cottonwood, Populus trichocarpa (Torr & Gray)
    • Tuskan GA, DiFazio S, Jansson S, Bohlmann J, Grigoriev I, et al. (2006) The genome of black cottonwood, Populus trichocarpa (Torr & Gray). Science 313: 1596-1604.
    • (2006) Science , vol.313 , pp. 1596-1604
    • Tuskan, G.A.1    DiFazio, S.2    Jansson, S.3    Bohlmann, J.4    Grigoriev, I.5
  • 19
    • 84867402003 scopus 로고    scopus 로고
    • Genome resequencing reveals multiscale geographic structure and extensive linkage disequilibrium in the forest tree Populus trichocarpa
    • doi: 10.1111/j.1469-8137.2012.04258.x
    • Slavov GT, DiFazio SP, Martin J, Schackwitz W, Muchero W, et al. (2012) Genome resequencing reveals multiscale geographic structure and extensive linkage disequilibrium in the forest tree Populus trichocarpa. New Phytologist. doi: 10.1111/j.1469-8137.2012.04258.x.
    • (2012) New Phytologist
    • Slavov, G.T.1    DiFazio, S.P.2    Martin, J.3    Schackwitz, W.4    Muchero, W.5
  • 20
    • 77952426659 scopus 로고    scopus 로고
    • Bioinformatics-Based Identification of Candidate Genes from QTLs Associated with Cell Wall Traits in Populus
    • Ranjan P, Yin T, Zhang X, Kalluri UC, Yang X, et al. (2010) Bioinformatics-Based Identification of Candidate Genes from QTLs Associated with Cell Wall Traits in Populus. Bioenergy Research 3: 172-182.
    • (2010) Bioenergy Research , vol.3 , pp. 172-182
    • Ranjan, P.1    Yin, T.2    Zhang, X.3    Kalluri, U.C.4    Yang, X.5
  • 21
    • 78649506381 scopus 로고    scopus 로고
    • Differential detection of genetic loci underlying stem and root lignin content in Populus
    • Yin T, Zhang X, Gunter L, Ranjan P, Sykes R, et al. (2010) Differential detection of genetic loci underlying stem and root lignin content in Populus. Plos One 5: e14021.
    • (2010) Plos One , vol.5
    • Yin, T.1    Zhang, X.2    Gunter, L.3    Ranjan, P.4    Sykes, R.5
  • 22
    • 10744223698 scopus 로고    scopus 로고
    • Identification of quantitative trait loci influencing wood property traits in loblolly pine (Pinus taeda L) III QTL verification and candidate gene mapping
    • Brown GR, Bassoni DL, Gill GP, Fontana JR, Wheeler NC, et al. (2003) Identification of quantitative trait loci influencing wood property traits in loblolly pine (Pinus taeda L) III QTL verification and candidate gene mapping. Genetics 164: 1537-1546.
    • (2003) Genetics , vol.164 , pp. 1537-1546
    • Brown, G.R.1    Bassoni, D.L.2    Gill, G.P.3    Fontana, J.R.4    Wheeler, N.C.5
  • 23
    • 75849147915 scopus 로고    scopus 로고
    • Restriction site polymorphism-based candidate gene mapping for seedling drought tolerance in cowpea [Vigna unguiculata (L.) Walp.]
    • Muchero W, Ehlers JD, Roberts PA, (2010) Restriction site polymorphism-based candidate gene mapping for seedling drought tolerance in cowpea [Vigna unguiculata (L.) Walp.]. Theoretical Applied Genetics 120: 509-518.
    • (2010) Theoretical Applied Genetics , vol.120 , pp. 509-518
    • Muchero, W.1    Ehlers, J.D.2    Roberts, P.A.3
  • 24
    • 78650768337 scopus 로고    scopus 로고
    • Genic SNP markers and legume synteny reveal candidate genes underlying QTL for Macrophomina phaseolina resistance and maturity in cowpea [Vigna unguiculata (L) Walp]
    • Muchero W, Ehlers JD, Close TJ, Roberts PA, (2011) Genic SNP markers and legume synteny reveal candidate genes underlying QTL for Macrophomina phaseolina resistance and maturity in cowpea [Vigna unguiculata (L) Walp]. BMC Genomics 12: 8.
    • (2011) BMC Genomics , vol.12 , pp. 8
    • Muchero, W.1    Ehlers, J.D.2    Close, T.J.3    Roberts, P.A.4
  • 25
    • 40449120616 scopus 로고    scopus 로고
    • Genome structure and emerging evidence of an incipient sex chromosome in Populus
    • Yin T, DiFazio SP, Gunter LE, Zhang X, Sewell MM, et al. (2008) Genome structure and emerging evidence of an incipient sex chromosome in Populus. Genome Research 18: 422-430.
    • (2008) Genome Research , vol.18 , pp. 422-430
    • Yin, T.1    DiFazio, S.P.2    Gunter, L.E.3    Zhang, X.4    Sewell, M.M.5
  • 26
    • 0036256695 scopus 로고    scopus 로고
    • MapChart: Software for the graphical presentation of linkage maps and QTLs
    • Voorrips RE, (2002) MapChart: Software for the graphical presentation of linkage maps and QTLs. Heredity 93: 77-78.
    • (2002) Heredity , vol.93 , pp. 77-78
    • Voorrips, R.E.1
  • 28
    • 0028151261 scopus 로고
    • Empirical threshold values for quantitative trait mapping
    • Churchill GA, Doerge RW, (1994) Empirical threshold values for quantitative trait mapping. Genetics 138: 963-971.
    • (1994) Genetics , vol.138 , pp. 963-971
    • Churchill, G.A.1    Doerge, R.W.2
  • 29
    • 0030944530 scopus 로고    scopus 로고
    • Molecular Genetics of Growth and Development in Populus (Salicaceae). V. Mapping Quantitative Trait Loci Affecting Leaf Variation
    • Wu R, Bradshaw HD, Stettler R, (1997) Molecular Genetics of Growth and Development in Populus (Salicaceae). V. Mapping Quantitative Trait Loci Affecting Leaf Variation. American Journal of Botany 84: 143-153.
    • (1997) American Journal of Botany , vol.84 , pp. 143-153
    • Wu, R.1    Bradshaw, H.D.2    Stettler, R.3
  • 30
    • 0000502954 scopus 로고
    • Model selection and validation for yield trials with interactions
    • Gauch HG, (1988) Model selection and validation for yield trials with interactions. Biometrics 44: 705-715.
    • (1988) Biometrics , vol.44 , pp. 705-715
    • Gauch, H.G.1
  • 31
    • 0037418206 scopus 로고    scopus 로고
    • Single-locus heterotic effects and dominance by dominance interactions can adequately explain the genetic basis of heterosis in an elite rice hybrid
    • Hua J, Xing Y, Wu W, Xu C, Sun X, et al. (2003) Single-locus heterotic effects and dominance by dominance interactions can adequately explain the genetic basis of heterosis in an elite rice hybrid. Proceedings of the National Academy of Sciences 100: 2574-2579.
    • (2003) Proceedings of the National Academy of Sciences , vol.100 , pp. 2574-2579
    • Hua, J.1    Xing, Y.2    Wu, W.3    Xu, C.4    Sun, X.5


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