메뉴 건너뛰기




Volumn 195, Issue 4, 2013, Pages 655-671

Sequence determinants of circadian gene expression phase in cyanobacteria

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIAL GENOME; BACTERIAL STRAIN; BACTERIUM CULTURE; BIOINFORMATICS; CIRCADIAN GENE EXPRESSION PHASE; MOLECULAR CLONING; MOLECULAR GENETICS; MUTAGENESIS; NONHUMAN; OPEN READING FRAME; PRIORITY JOURNAL; PROMOTER REGION; SINGLE NUCLEOTIDE POLYMORPHISM; SYNECHOCOCCUS ELONGATUS; TRANSCRIPTION INITIATION SITE; CIRCADIAN RHYTHM; GENE; GENE EXPRESSION REGULATION; GENETICS; LIGHT; LUMINESCENCE; METABOLISM; NUCLEOTIDE SEQUENCE; PHYSIOLOGY; POINT MUTATION; POLYMERASE CHAIN REACTION; RADIATION EXPOSURE; SYNECHOCOCCUS;

EID: 84873559841     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.02012-12     Document Type: Article
Times cited : (9)

References (23)
  • 3
    • 76049087668 scopus 로고    scopus 로고
    • Oscillations in supercoiling drive circadian gene expression in cyanobacteria
    • Vijayan V, Zuzow R, O'Shea EK. 2009. Oscillations in supercoiling drive circadian gene expression in cyanobacteria. Proc. Natl. Acad. Sci. U. S. A. 106:22564-22568.
    • (2009) Proc. Natl. Acad. Sci. U. S. A. , vol.106 , pp. 22564-22568
    • Vijayan, V.1    Zuzow, R.2    O'Shea, E.K.3
  • 4
    • 4344699146 scopus 로고    scopus 로고
    • The adaptive value of circadian clocks: an experimental assessment in cyanobacteria
    • Woelfle MA, Ouyang Y, Phanvijhitsiri K, Johnson CH. 2004. The adaptive value of circadian clocks: an experimental assessment in cyanobacteria. Curr. Biol. 14:1481-1486.
    • (2004) Curr. Biol. , vol.14 , pp. 1481-1486
    • Woelfle, M.A.1    Ouyang, Y.2    Phanvijhitsiri, K.3    Johnson, C.H.4
  • 5
    • 78349307885 scopus 로고    scopus 로고
    • Simplicity and complexity in the cyanobacterial circadian clock mechanism
    • Dong G, Kim YI, Golden SS. 2010. Simplicity and complexity in the cyanobacterial circadian clock mechanism. Curr. Opin. Genet. Dev. 20: 619-625.
    • (2010) Curr. Opin. Genet. Dev. , vol.20 , pp. 619-625
    • Dong, G.1    Kim, Y.I.2    Golden, S.S.3
  • 8
    • 33744779947 scopus 로고    scopus 로고
    • Circadian rhythms in gene transcription imparted by chromosome compaction in the cyanobacterium Synechococcus elongatus
    • Smith RM, Williams SB. 2006. Circadian rhythms in gene transcription imparted by chromosome compaction in the cyanobacterium Synechococcus elongatus. Proc. Natl. Acad. Sci. U. S. A. 103:8564-8569.
    • (2006) Proc. Natl. Acad. Sci. U. S. A. , vol.103 , pp. 8564-8569
    • Smith, R.M.1    Williams, S.B.2
  • 9
    • 1642285223 scopus 로고    scopus 로고
    • Phase determination of circadian gene expression in Synechococcus elongatus PCC 7942
    • Min H, Liu Y, Johnson CH, Golden SS. 2004. Phase determination of circadian gene expression in Synechococcus elongatus PCC 7942. J. Biol. Rhythms 19:103-112.
    • (2004) J. Biol. Rhythms , vol.19 , pp. 103-112
    • Min, H.1    Liu, Y.2    Johnson, C.H.3    Golden, S.S.4
  • 10
    • 23844525522 scopus 로고    scopus 로고
    • Transcriptional regulation of the circadian clock operon kaiBC by upstream regions in cyanobacteria
    • Kutsuna S, Nakahira Y, Katayama M, Ishiura M, Kondo T. 2005. Transcriptional regulation of the circadian clock operon kaiBC by upstream regions in cyanobacteria. Mol. Microbiol. 57:1474-1484.
    • (2005) Mol. Microbiol. , vol.57 , pp. 1474-1484
    • Kutsuna, S.1    Nakahira, Y.2    Katayama, M.3    Ishiura, M.4    Kondo, T.5
  • 11
    • 34248592701 scopus 로고    scopus 로고
    • Detection of rhythmic bioluminescence from luciferase reporters in cyanobacteria
    • Mackey SR, Ditty JL, Clerico EM, Golden SS. 2007. Detection of rhythmic bioluminescence from luciferase reporters in cyanobacteria. Methods Mol. Biol. 362:115-129.
    • (2007) Methods Mol. Biol. , vol.362 , pp. 115-129
    • Mackey, S.R.1    Ditty, J.L.2    Clerico, E.M.3    Golden, S.S.4
  • 12
    • 80955173627 scopus 로고    scopus 로고
    • A high resolution map of a cyanobacterial transcriptome
    • Vijayan V, Jain IH, O'Shea EK. 2011. A high resolution map of a cyanobacterial transcriptome. Genome Biol. 12:R47.
    • (2011) Genome Biol , vol.12
    • Vijayan, V.1    Jain, I.H.2    O'Shea, E.K.3
  • 14
    • 0016658183 scopus 로고
    • Nucleotide sequence of an RNA polymerase binding site from the DNA of bacteriophage fd
    • Schaller H, Gray C, Herrmann K. 1975. Nucleotide sequence of an RNA polymerase binding site from the DNA of bacteriophage fd. Proc. Natl. Acad. Sci. U. S. A. 72:737-741.
    • (1975) Proc. Natl. Acad. Sci. U. S. A. , vol.72 , pp. 737-741
    • Schaller, H.1    Gray, C.2    Herrmann, K.3
  • 15
    • 0343597687 scopus 로고
    • Nucleotide sequence of an RNA polymerase binding site at an early T7 promoter
    • Pribnow D. 1975. Nucleotide sequence of an RNA polymerase binding site at an early T7 promoter. Proc. Natl. Acad. Sci. U. S. A. 72:784-788.
    • (1975) Proc. Natl. Acad. Sci. U. S. A. , vol.72 , pp. 784-788
    • Pribnow, D.1
  • 17
    • 0028918572 scopus 로고
    • Bacterial luciferase as a reporter of circadian gene expression in cyanobacteria
    • Liu Y, Golden SS, Kondo T, Ishiura M, Johnson CH. 1995. Bacterial luciferase as a reporter of circadian gene expression in cyanobacteria. J. Bacteriol. 177:2080-2086.
    • (1995) J. Bacteriol. , vol.177 , pp. 2080-2086
    • Liu, Y.1    Golden, S.S.2    Kondo, T.3    Ishiura, M.4    Johnson, C.H.5
  • 18
    • 0035110832 scopus 로고    scopus 로고
    • Functional elements of the strong psbAI promoter of Synechococcus elongatus PCC 7942
    • Nair U, Thomas C, Golden SS. 2001. Functional elements of the strong psbAI promoter of Synechococcus elongatus PCC 7942. J. Bacteriol. 183: 1740-1747.
    • (2001) J. Bacteriol. , vol.183 , pp. 1740-1747
    • Nair, U.1    Thomas, C.2    Golden, S.S.3
  • 19
    • 0030005494 scopus 로고    scopus 로고
    • Circadian expression of genes involved in the purine biosynthetic pathway of the cyanobacterium Synechococcus sp. strain PCC 7942
    • Liu Y, Tsinoremas NF, Golden SS, Kondo T, Johnson CH. 1996. Circadian expression of genes involved in the purine biosynthetic pathway of the cyanobacterium Synechococcus sp. strain PCC 7942. Mol. Microbiol. 20:1071-1081.
    • (1996) Mol. Microbiol. , vol.20 , pp. 1071-1081
    • Liu, Y.1    Tsinoremas, N.F.2    Golden, S.S.3    Kondo, T.4    Johnson, C.H.5
  • 20
    • 52649126241 scopus 로고    scopus 로고
    • DNA supercoiling-dependent gene regulation in Chlamydia
    • Niehus E, Cheng E, Tan M. 2008. DNA supercoiling-dependent gene regulation in Chlamydia. J. Bacteriol. 190:6419-6427.
    • (2008) J. Bacteriol. , vol.190 , pp. 6419-6427
    • Niehus, E.1    Cheng, E.2    Tan, M.3
  • 21
    • 2642714953 scopus 로고    scopus 로고
    • The supercoiling sensitivity of a bacterial tRNA promoter parallels its responsiveness to stringent control
    • Figueroa-Bossi N, Guerin M, Rahmouni R, Leng M, Bossi L. 1998. The supercoiling sensitivity of a bacterial tRNA promoter parallels its responsiveness to stringent control. EMBO J. 17:2359-2367.
    • (1998) EMBO J , vol.17 , pp. 2359-2367
    • Figueroa-Bossi, N.1    Guerin, M.2    Rahmouni, R.3    Leng, M.4    Bossi, L.5
  • 22
    • 0023176329 scopus 로고
    • Modulation of transcription by DNA supercoiling: a deletion analysis of the Escherichia coli gyrA and gyrB promoters
    • Menzel R, Gellert M. 1987. Modulation of transcription by DNA supercoiling: a deletion analysis of the Escherichia coli gyrA and gyrB promoters. Proc. Natl. Acad. Sci. U. S. A. 84:4185-4189.
    • (1987) Proc. Natl. Acad. Sci. U. S. A. , vol.84 , pp. 4185-4189
    • Menzel, R.1    Gellert, M.2
  • 23
    • 0028111913 scopus 로고
    • Mutations in the _10 TATAAT sequence of the gyrA promoter affect both promoter strength and sensitivity to DNA supercoiling
    • Straney R, Krah R, Menzel R. 1994. Mutations in the -10 TATAAT sequence of the gyrA promoter affect both promoter strength and sensitivity to DNA supercoiling. J. Bacteriol. 176:5999-6006.
    • (1994) J. Bacteriol. , vol.176 , pp. 5999-6006
    • Straney, R.1    Krah, R.2    Menzel, R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.