메뉴 건너뛰기




Volumn 4, Issue 2, 2013, Pages 184-194

On the practical usage of genetic algorithms in ecology and evolution

Author keywords

Evolutionary computation; Genetic algorithm; Metaheuristics; Optimisation techniques

Indexed keywords


EID: 84873535674     PISSN: None     EISSN: 2041210X     Source Type: Journal    
DOI: 10.1111/2041-210X.12000     Document Type: Review
Times cited : (67)

References (71)
  • 1
    • 79952734908 scopus 로고    scopus 로고
    • Predation and the phasing of sleep: an evolutionary individual-based model
    • Acerbi, A. & Nunn, C.L. (2011) Predation and the phasing of sleep: an evolutionary individual-based model. Animal Behaviour, 81, 801-811.
    • (2011) Animal Behaviour , vol.81 , pp. 801-811
    • Acerbi, A.1    Nunn, C.L.2
  • 3
    • 81155139598 scopus 로고    scopus 로고
    • Recombination and the evolution of coordinated phenotypic expression in a frequency-dependent game
    • Arbilly, M., Motro, U., Feldman, M.W. & Lotem, A. (2011) Recombination and the evolution of coordinated phenotypic expression in a frequency-dependent game. Theoretical Population Biology, 80, 244-255.
    • (2011) Theoretical Population Biology , vol.80 , pp. 244-255
    • Arbilly, M.1    Motro, U.2    Feldman, M.W.3    Lotem, A.4
  • 5
    • 0019480612 scopus 로고
    • The evolution of cooperation
    • Axelrod, R. & Hamilton, W.D. (1981) The evolution of cooperation. Science, 211, 1390-1396.
    • (1981) Science , vol.211 , pp. 1390-1396
    • Axelrod, R.1    Hamilton, W.D.2
  • 9
    • 0034619563 scopus 로고    scopus 로고
    • Learning rules for social foragers: implications for the producer-scrounger game and ideal free distribution theory
    • Beauchamp, G. (2000) Learning rules for social foragers: implications for the producer-scrounger game and ideal free distribution theory. Journal of Theoretical Biology, 207, 21-35.
    • (2000) Journal of Theoretical Biology , vol.207 , pp. 21-35
    • Beauchamp, G.1
  • 10
    • 56049094314 scopus 로고    scopus 로고
    • A spatial model of producing and scrounging
    • Beauchamp, G. (2008) A spatial model of producing and scrounging. Animal Behaviour, 76, 1935-1942.
    • (2008) Animal Behaviour , vol.76 , pp. 1935-1942
    • Beauchamp, G.1
  • 11
    • 26444450069 scopus 로고    scopus 로고
    • Harvesting resources in groups or alone: the case of renewing patches
    • Beauchamp, G. & Ruxton, G.D. (2005) Harvesting resources in groups or alone: the case of renewing patches. Behavioral Ecology, 16, 989-993.
    • (2005) Behavioral Ecology , vol.16 , pp. 989-993
    • Beauchamp, G.1    Ruxton, G.D.2
  • 12
    • 35748930549 scopus 로고    scopus 로고
    • False alarms and the evolution of antipredator vigilance
    • Beauchamp, G. & Ruxton, G.D. (2007) False alarms and the evolution of antipredator vigilance. Animal Behaviour, 74, 1199-1206.
    • (2007) Animal Behaviour , vol.74 , pp. 1199-1206
    • Beauchamp, G.1    Ruxton, G.D.2
  • 13
    • 0003191152 scopus 로고    scopus 로고
    • A genetic algorithm approach to study the evolution of female preference based on male age
    • Beck, C., Shapiro, B., Choksi, S. & Promislow, D.E.L. (2002) A genetic algorithm approach to study the evolution of female preference based on male age. Evolutionary Ecology Research, 4, 275-292.
    • (2002) Evolutionary Ecology Research , vol.4 , pp. 275-292
    • Beck, C.1    Shapiro, B.2    Choksi, S.3    Promislow, D.E.L.4
  • 14
    • 0344236266 scopus 로고    scopus 로고
    • Metaheuristics in combinatorial optimization: overview and conceptual comparison
    • Blum, C. & Roli, A. (2003) Metaheuristics in combinatorial optimization: overview and conceptual comparison. Association for Computing Machinery, 35, 268-308. URLhttp://doi.acm.org/10.1145/937503.937505.
    • (2003) Association for Computing Machinery , vol.35 , pp. 268-308
    • Blum, C.1    Roli, A.2
  • 15
    • 0037034032 scopus 로고    scopus 로고
    • Visual predators select for crypticity and polymorphism in virtual prey
    • Bond, A.B. & Kamil, A.C. (2002) Visual predators select for crypticity and polymorphism in virtual prey. Nature, 415, 609-612.
    • (2002) Nature , vol.415 , pp. 609-612
    • Bond, A.B.1    Kamil, A.C.2
  • 16
    • 0031829586 scopus 로고    scopus 로고
    • Life-history decisions under predation risk: importance of a game perspective
    • Bouskila, A., Robinson, M.E., Roitberg, B.D. & Tenhumberg, B. (1998) Life-history decisions under predation risk: importance of a game perspective. Evolutionary Ecology, 12, 701-715.
    • (1998) Evolutionary Ecology , vol.12 , pp. 701-715
    • Bouskila, A.1    Robinson, M.E.2    Roitberg, B.D.3    Tenhumberg, B.4
  • 17
    • 79960381643 scopus 로고    scopus 로고
    • The importance of variable timing and abundance of prey for fish larval recruitment
    • Burrow, J.F., Horwood, J.W. & Pitchford, J.W. (2011) The importance of variable timing and abundance of prey for fish larval recruitment. Journal of Plankton Research, 33, 1153-1162.
    • (2011) Journal of Plankton Research , vol.33 , pp. 1153-1162
    • Burrow, J.F.1    Horwood, J.W.2    Pitchford, J.W.3
  • 18
    • 33747838445 scopus 로고    scopus 로고
    • Learning rules for optimal selection in a varying environment: mate choice revised
    • Collins, E.J., McNamara, J.M. & Ramsey, D.M. (2006) Learning rules for optimal selection in a varying environment: mate choice revised. Behavioral Ecology, 17, 799-809.
    • (2006) Behavioral Ecology , vol.17 , pp. 799-809
    • Collins, E.J.1    McNamara, J.M.2    Ramsey, D.M.3
  • 20
    • 77956880475 scopus 로고    scopus 로고
    • Computational evolution: taking liberties
    • Correia, L. (2010) Computational evolution: taking liberties. Theory in Biosciences, 129, 183-191.
    • (2010) Theory in Biosciences , vol.129 , pp. 183-191
    • Correia, L.1
  • 21
    • 77955595589 scopus 로고    scopus 로고
    • Interactions between behavioral and life-history trade-offs in the evolution of integrated predator-defense plasticity
    • Cressler, C.E., King, A.A. & Werner, E.E. (2010) Interactions between behavioral and life-history trade-offs in the evolution of integrated predator-defense plasticity. The American Naturalist, 176, 276-288.
    • (2010) The American Naturalist , vol.176 , pp. 276-288
    • Cressler, C.E.1    King, A.A.2    Werner, E.E.3
  • 23
    • 0002460716 scopus 로고
    • Epistasis variance: a viewpoint on GA-hardness
    • (ed G.J.E. Rawlins). chap. 2. Morgan Kaufmann, San Mateo.
    • Davidor, Y. (1991) Epistasis variance: a viewpoint on GA-hardness. Fundamentals of Genetic Algorithms, vol. 1 (ed G.J.E. Rawlins), pp. 23-35. chap. 2. Morgan Kaufmann, San Mateo.
    • (1991) Fundamentals of Genetic Algorithms , vol.1 , pp. 23-35
    • Davidor, Y.1
  • 25
    • 33747255625 scopus 로고    scopus 로고
    • Theoretical influence of female mating status and remating propensity on male sperm allocation patterns
    • Engqvist, L. & Reinhold, K. (2006) Theoretical influence of female mating status and remating propensity on male sperm allocation patterns. Journal of Evolutionary Biology, 19, 1448-1458.
    • (2006) Journal of Evolutionary Biology , vol.19 , pp. 1448-1458
    • Engqvist, L.1    Reinhold, K.2
  • 26
    • 39049185114 scopus 로고    scopus 로고
    • Sperm competition games: optimal sperm allocation in response to the size of competing ejaculates. Proceedings of the Royal Society of London
    • Engqvist, L. & Reinhold, K. (2007) Sperm competition games: optimal sperm allocation in response to the size of competing ejaculates. Proceedings of the Royal Society of London. Series B, Biological Sciences, 274, 209-217.
    • (2007) Series B, Biological Sciences , vol.274 , pp. 209-217
    • Engqvist, L.1    Reinhold, K.2
  • 27
    • 0020957188 scopus 로고
    • Evolutionary and continuous stability
    • Eshel, I. (1983) Evolutionary and continuous stability. Journal of Theoretical Biology, 103, 99-111.
    • (1983) Journal of Theoretical Biology , vol.103 , pp. 99-111
    • Eshel, I.1
  • 32
    • 70649083163 scopus 로고    scopus 로고
    • Finding the evolutionarily stable learning rule for frequency-dependent foraging
    • Hamblin, S. & Giraldeau, L.A. (2009) Finding the evolutionarily stable learning rule for frequency-dependent foraging. Animal Behaviour, 78, 1343-1350.
    • (2009) Animal Behaviour , vol.78 , pp. 1343-1350
    • Hamblin, S.1    Giraldeau, L.A.2
  • 33
    • 35148842361 scopus 로고    scopus 로고
    • Evolution's strategies: genetic algorithms and game theory models
    • Hamblin, S. & Hurd, P.L. (2007) Evolution's strategies: genetic algorithms and game theory models. Animal Behaviour, 74, 1005-1018.
    • (2007) Animal Behaviour , vol.74 , pp. 1005-1018
    • Hamblin, S.1    Hurd, P.L.2
  • 34
    • 64549135755 scopus 로고    scopus 로고
    • When will evolution lead to deceptive signaling in the Sir Philip Sidney game
    • Hamblin, S. & Hurd, P.L. (2009) When will evolution lead to deceptive signaling in the Sir Philip Sidney game? Theoretical Population Biology, 75, 176-182.
    • (2009) Theoretical Population Biology , vol.75 , pp. 176-182
    • Hamblin, S.1    Hurd, P.L.2
  • 35
  • 36
    • 33646526708 scopus 로고    scopus 로고
    • Modelling the many-wrongs principle: the navigational advantages of aggregation in nomadic foragers
    • Hancock, P.A., Milner-Gulland, E.J. & Keeling, M.J. (2006) Modelling the many-wrongs principle: the navigational advantages of aggregation in nomadic foragers. Journal of Theoretical Biology, 240, 302-310.
    • (2006) Journal of Theoretical Biology , vol.240 , pp. 302-310
    • Hancock, P.A.1    Milner-Gulland, E.J.2    Keeling, M.J.3
  • 37
    • 33645227621 scopus 로고    scopus 로고
    • Adaptive patch searching strategies in fragmented landscapes
    • Heinz, S.K. & Strand, E. (2006) Adaptive patch searching strategies in fragmented landscapes. Evolutionary Ecology, 20, 113-130.
    • (2006) Evolutionary Ecology , vol.20 , pp. 113-130
    • Heinz, S.K.1    Strand, E.2
  • 38
    • 0001118093 scopus 로고
    • Co-evolving parasites improve simulated evolution as an optimization procedure
    • Hillis, D.W. (1990) Co-evolving parasites improve simulated evolution as an optimization procedure. Physica D, 42, 228-234.
    • (1990) Physica D , vol.42 , pp. 228-234
    • Hillis, D.W.1
  • 41
    • 0033303131 scopus 로고    scopus 로고
    • Implementing behaviour in individual-based models using neural networks and genetic algorithms
    • Huse, G., Strand, E. & Giske, J. (1999) Implementing behaviour in individual-based models using neural networks and genetic algorithms. Evolutionary Ecology, 13, 469-483.
    • (1999) Evolutionary Ecology , vol.13 , pp. 469-483
    • Huse, G.1    Strand, E.2    Giske, J.3
  • 42
    • 0033278748 scopus 로고    scopus 로고
    • The genetic code: what is it good for? an analysis of the effects of selection pressures on genetic codes
    • Judson, O.P. & Haydon, D. (1999) The genetic code: what is it good for? an analysis of the effects of selection pressures on genetic codes. Journal of Molecular Evolution, 49, 539-550.
    • (1999) Journal of Molecular Evolution , vol.49 , pp. 539-550
    • Judson, O.P.1    Haydon, D.2
  • 44
    • 0028321070 scopus 로고
    • Collective detection of predatory attack by birds in the absence of alarm signals
    • Lima, S.L. (1994) Collective detection of predatory attack by birds in the absence of alarm signals. Journal of Avian Biology, 25, 319-326.
    • (1994) Journal of Avian Biology , vol.25 , pp. 319-326
    • Lima, S.L.1
  • 45
    • 84873543926 scopus 로고    scopus 로고
    • Essentials of Metaheuristics. Lulu. Available for free at
    • Luke, S. (2009) Essentials of Metaheuristics. Lulu. Available for free at http:/cs.gmu.edu/~sean/book/metaheuristics/.
    • (2009)
    • Luke, S.1
  • 46
    • 0004018184 scopus 로고
    • Cambridge University Press, New York, NY. ISBN 0-521-28884-3.
    • Maynard Smith, J. (1982) Evolution and the Theory of Games. Cambridge University Press, New York, NY. ISBN 0-521-28884-3.
    • (1982) Evolution and the Theory of Games
    • Maynard1    Smith, J.2
  • 48
    • 67649510107 scopus 로고    scopus 로고
    • Multi-behavioral strategies in a predator-prey game: an evolutionary algorithm analysis
    • Mitchell, W.A. (2009) Multi-behavioral strategies in a predator-prey game: an evolutionary algorithm analysis. Oikos, 118, 1073-1083.
    • (2009) Oikos , vol.118 , pp. 1073-1083
    • Mitchell, W.A.1
  • 49
    • 1842271863 scopus 로고
    • Analysis of selection, mutation, and recombination in genetic algorithms
    • eds W. Banzhaf& F.H. Eeckman). Springer, Berlin.
    • Mühlenbein, H. & Schlierkamp-Voosen, D. (1995) Analysis of selection, mutation, and recombination in genetic algorithms. Evolution as a Computational Process, (eds W. Banzhaf & F.H. Eeckman), pp. 188-213. Springer, Berlin.
    • (1995) Evolution as a Computational Process , pp. 188-213
    • Mühlenbein, H.1    Schlierkamp-Voosen, D.2
  • 50
    • 0036972336 scopus 로고    scopus 로고
    • Evolution of reinforcement learning in uncertain environments: a simple explanation for complex foraging behaviors
    • Niv, Y., Joel, D., Meilijson, I. & Ruppin, E. (2002) Evolution of reinforcement learning in uncertain environments: a simple explanation for complex foraging behaviors. Adaptive Behavior, 10, 5-24.
    • (2002) Adaptive Behavior , vol.10 , pp. 5-24
    • Niv, Y.1    Joel, D.2    Meilijson, I.3    Ruppin, E.4
  • 51
    • 0025098505 scopus 로고
    • An evolutionarily stable strategy may be inaccessible
    • Nowak, M. (1990) An evolutionarily stable strategy may be inaccessible. Journal of Theoretical Biology, 142, 237-241.
    • (1990) Journal of Theoretical Biology , vol.142 , pp. 237-241
    • Nowak, M.1
  • 52
    • 34547323503 scopus 로고    scopus 로고
    • Emergent behaviour, population-based search and low-pass filtering. IEEE Congress on Evolutionary Computation, 2006
    • Poli, R., Wright, A., McPhee, N. & Langdon, W. (2006) Emergent behaviour, population-based search and low-pass filtering. IEEE Congress on Evolutionary Computation, 2006. pp. 88-95.
    • (2006) , pp. 88-95
    • Poli, R.1    Wright, A.2    McPhee, N.3    Langdon, W.4
  • 53
    • 0035928851 scopus 로고    scopus 로고
    • Modelling antipredator vigilance and flight response in group foragers when warning signals are ambiguous
    • Proctor, C.J., Broom, M. & Ruxton, G.D. (2001) Modelling antipredator vigilance and flight response in group foragers when warning signals are ambiguous. Journal of Theoretical Biology, 211, 409-417.
    • (2001) Journal of Theoretical Biology , vol.211 , pp. 409-417
    • Proctor, C.J.1    Broom, M.2    Ruxton, G.D.3
  • 54
    • 0036218907 scopus 로고    scopus 로고
    • Crypic male choice: sperm allocation strategies when female quality varies
    • Reinhold, K., Kurtz, J. & Engqvist, L. (2002) Crypic male choice: sperm allocation strategies when female quality varies. Journal of Evolutionary Biology, 15, 201-209.
    • (2002) Journal of Evolutionary Biology , vol.15 , pp. 201-209
    • Reinhold, K.1    Kurtz, J.2    Engqvist, L.3
  • 56
    • 38049044806 scopus 로고    scopus 로고
    • The application of genetic algorithms in behavioural ecology, illustrated with a model of anti-predator vigilance
    • Ruxton, G.D. & Beauchamp, G. (2008) The application of genetic algorithms in behavioural ecology, illustrated with a model of anti-predator vigilance. Journal of Theoretical Biology, 250, 435-448.
    • (2008) Journal of Theoretical Biology , vol.250 , pp. 435-448
    • Ruxton, G.D.1    Beauchamp, G.2
  • 57
    • 0032493323 scopus 로고    scopus 로고
    • The evolution of generosity and choosiness in cooperative exchanges
    • Sherratt, T.N. & Roberts, G. (1998) The evolution of generosity and choosiness in cooperative exchanges. Journal of Theoretical Biology, 193, 167-177.
    • (1998) Journal of Theoretical Biology , vol.193 , pp. 167-177
    • Sherratt, T.N.1    Roberts, G.2
  • 60
    • 0036275255 scopus 로고    scopus 로고
    • Artifical evolution of life history and behavior
    • Strand, E., Huse, G. & Giske, J. (2002) Artifical evolution of life history and behavior. The American Naturalist, 159, 624-644.
    • (2002) The American Naturalist , vol.159 , pp. 624-644
    • Strand, E.1    Huse, G.2    Giske, J.3
  • 62
    • 0001842954 scopus 로고
    • A study of reproduction in generational and steady-state genetic algorithms
    • (ed G.J.E. Rawlins). chap. 6. Morgan Kaufmann
    • Syswerda, G. (1991) A study of reproduction in generational and steady-state genetic algorithms. Foundations of Genetic Algorithms, vol. 1 (ed G.J.E. Rawlins), pp. 94-101. chap. 6. Morgan Kaufmann.
    • (1991) Foundations of Genetic Algorithms , vol.1 , pp. 94-101
    • Syswerda, G.1
  • 63
    • 80053581954 scopus 로고    scopus 로고
    • Optimal selection for multiple quantitative trait loci and contributions of individuals using genetic algorithm
    • Tang, G., Lin, P., Xu, C., Xue, J., Liu, T., Wang, Z. & Li, X. (2011) Optimal selection for multiple quantitative trait loci and contributions of individuals using genetic algorithm. Livestock Science, 141, 242-251.
    • (2011) Livestock Science , vol.141 , pp. 242-251
    • Tang, G.1    Lin, P.2    Xu, C.3    Xue, J.4    Liu, T.5    Wang, Z.6    Li, X.7
  • 64
    • 35748986446 scopus 로고    scopus 로고
    • Crossover and evolutionary stability in the Prisoner's Dilemma
    • Thibert-Plante, X. & Charbonneau, P. (2007) Crossover and evolutionary stability in the Prisoner's Dilemma. Evolutionary Computation, 15, 321-344.
    • (2007) Evolutionary Computation , vol.15 , pp. 321-344
    • Thibert-Plante, X.1    Charbonneau, P.2
  • 65
    • 84873558111 scopus 로고    scopus 로고
    • Thomson Scientific. ISI Web of Science
    • Thomson Scientific (2011) ISI Web of Science. http://apps.isiknowledge.com/.
    • (2011)
  • 66
    • 78651498397 scopus 로고    scopus 로고
    • Data archiving in ecology and evolution: best practices
    • Whitlock, M.C. (2011) Data archiving in ecology and evolution: best practices. Trends in Ecology & Evolution, 26, 61-65.
    • (2011) Trends in Ecology & Evolution , vol.26 , pp. 61-65
    • Whitlock, M.C.1
  • 68
    • 79959333182 scopus 로고    scopus 로고
    • Direct fitness for dynamic kin selection
    • Wild, G. (2011) Direct fitness for dynamic kin selection. Journal of Evolutionary Biology, 24, 1598-1610.
    • (2011) Journal of Evolutionary Biology , vol.24 , pp. 1598-1610
    • Wild, G.1
  • 69
    • 15444373118 scopus 로고    scopus 로고
    • Transient phenomena in learning and evolution: genetic assimilation and genetic redistribution
    • Wiles, J., Watson, J., Tonkes, B. & Deacon, T. (2005) Transient phenomena in learning and evolution: genetic assimilation and genetic redistribution. Artificial Life, 11, 177-188.
    • (2005) Artificial Life , vol.11 , pp. 177-188
    • Wiles, J.1    Watson, J.2    Tonkes, B.3    Deacon, T.4
  • 70
    • 77957584984 scopus 로고    scopus 로고
    • Relaxation of selection, niche construction, and the Baldwin effect in langauge evolution
    • Yamauchi, H. & Hashimoto, T. (2010) Relaxation of selection, niche construction, and the Baldwin effect in langauge evolution. Artificial Life, 16, 271-287.
    • (2010) Artificial Life , vol.16 , pp. 271-287
    • Yamauchi, H.1    Hashimoto, T.2
  • 71
    • 79952467362 scopus 로고    scopus 로고
    • Numerical analysis of a unique mode of locomotion: vertical climbing by Pacific lamprey
    • Zhu, Q., Moser, M. & Kemp, P. (2011) Numerical analysis of a unique mode of locomotion: vertical climbing by Pacific lamprey. Bioinspiration & Biomimetics, 6, 016005.
    • (2011) Bioinspiration & Biomimetics , vol.6 , pp. 016005
    • Zhu, Q.1    Moser, M.2    Kemp, P.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.