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Volumn 8, Issue 2, 2013, Pages

Exploring the Diversity of Arcobacter butzleri from Cattle in the UK Using MLST and Whole Genome Sequencing

Author keywords

[No Author keywords available]

Indexed keywords

ARCOBACTER; ARCOBACTER BUTZLERI; ARTICLE; BACTERIAL GENOME; BACTERIAL STRAIN; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATE; CATTLE FARMING; CONTROLLED STUDY; ECOLOGICAL NICHE; FECES ANALYSIS; GENE LOCATION; GENE SEQUENCE; GENOTYPE; MICROARRAY ANALYSIS; MULTILOCUS SEQUENCE TYPING; NONHUMAN; PHENOTYPE; SPECIES DIVERSITY; UNITED KINGDOM; ANIMAL; BOVINAE; CATTLE DISEASE; DNA SEQUENCE; FECES; GENETIC ASSOCIATION; GENETICS; GRAM NEGATIVE INFECTION; ISOLATION AND PURIFICATION; MICROBIOLOGY; PROCEDURES; VETERINARY;

EID: 84873529717     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0055240     Document Type: Article
Times cited : (46)

References (38)
  • 1
    • 0026671847 scopus 로고
    • Outbreak of recurrent abdominal cramps associated with Arcobacter butzleri in an Italian school
    • Vandamme P, Pugina P, Benzi G, Van Etterijck R, Vlaes L, et al. (1992) Outbreak of recurrent abdominal cramps associated with Arcobacter butzleri in an Italian school. J Clin Microbiol 309: 2335-2337.
    • (1992) J Clin Microbiol , vol.309 , pp. 2335-2337
    • Vandamme, P.1    Pugina, P.2    Benzi, G.3    Van Etterijck, R.4    Vlaes, L.5
  • 4
    • 18544406243 scopus 로고    scopus 로고
    • Isolation of Arcobacter spp. from retail meats and cytotoxic effects of isolates against vero cells
    • Villarruel-Lopez A, Marquez-Gonzalez M, Garay-Martinez LE, Zepeda H, Castillo A, et al. (2003) Isolation of Arcobacter spp. from retail meats and cytotoxic effects of isolates against vero cells. J Food Prot 668: 1374-1378.
    • (2003) J Food Prot , vol.668 , pp. 1374-1378
    • Villarruel-Lopez, A.1    Marquez-Gonzalez, M.2    Garay-Martinez, L.E.3    Zepeda, H.4    Castillo, A.5
  • 5
    • 0742289939 scopus 로고    scopus 로고
    • Prevalence of Arcobacter species in retail meats and antimicrobial susceptibility of the isolates in Japan
    • Kabeya H, Maruyama S, Morita Y, Ohsuga T, Ozawa S, et al. (2004) Prevalence of Arcobacter species in retail meats and antimicrobial susceptibility of the isolates in Japan. Int J Food Microbiol 903: 303-308.
    • (2004) Int J Food Microbiol , vol.903 , pp. 303-308
    • Kabeya, H.1    Maruyama, S.2    Morita, Y.3    Ohsuga, T.4    Ozawa, S.5
  • 6
    • 1842586942 scopus 로고    scopus 로고
    • Investigation of arcobacters in meat and faecal samples of clinically healthy cattle in Turkey
    • Ongor H, Cetinkaya B, Acik MN, Atabay HI, (2004) Investigation of arcobacters in meat and faecal samples of clinically healthy cattle in Turkey. Lett Appl Microbiol 384: 339-344.
    • (2004) Lett Appl Microbiol , vol.384 , pp. 339-344
    • Ongor, H.1    Cetinkaya, B.2    Acik, M.N.3    Atabay, H.I.4
  • 7
    • 1142273338 scopus 로고    scopus 로고
    • Isolation and characterisation of Arcobacter butzleri from meat
    • Rivas L, Fegan N, Vanderlinde P, (2004) Isolation and characterisation of Arcobacter butzleri from meat. Int J Food Microbiol 911: 31-41.
    • (2004) Int J Food Microbiol , vol.911 , pp. 31-41
    • Rivas, L.1    Fegan, N.2    Vanderlinde, P.3
  • 8
    • 33748358557 scopus 로고    scopus 로고
    • Prevalence of Arcobacter spp. in raw milk and retail raw meats in Northern Ireland
    • Scullion R, Harrington CS, Madden RH, (2006) Prevalence of Arcobacter spp. in raw milk and retail raw meats in Northern Ireland. J Food Prot 698: 1986-1990.
    • (2006) J Food Prot , vol.698 , pp. 1986-1990
    • Scullion, R.1    Harrington, C.S.2    Madden, R.H.3
  • 9
    • 34250837366 scopus 로고    scopus 로고
    • Prevalence and distribution of Arcobacter species in various sources in Turkey and molecular analysis of isolated strains by ERIC-PCR
    • Aydin F, Gumussoy KS, Atabay HI, Ica T, Abay S, (2007) Prevalence and distribution of Arcobacter species in various sources in Turkey and molecular analysis of isolated strains by ERIC-PCR. J Appl Microbiol 1031: 27-35.
    • (2007) J Appl Microbiol , vol.1031 , pp. 27-35
    • Aydin, F.1    Gumussoy, K.S.2    Atabay, H.I.3    Ica, T.4    Abay, S.5
  • 12
    • 41849148636 scopus 로고    scopus 로고
    • A comparison of media for the isolation of Arcobacter spp. from retail packs of beef
    • Hamill S, Neill SD, Madden RH, (2008) A comparison of media for the isolation of Arcobacter spp. from retail packs of beef. J Food Prot 74: 850-854.
    • (2008) J Food Prot , vol.74 , pp. 850-854
    • Hamill, S.1    Neill, S.D.2    Madden, R.H.3
  • 15
    • 34249723655 scopus 로고    scopus 로고
    • Advanced sequencing technologies and their wider impact in microbiology
    • Hall N, (2007) Advanced sequencing technologies and their wider impact in microbiology. J Exp Biol 210: 1518-1525.
    • (2007) J Exp Biol , vol.210 , pp. 1518-1525
    • Hall, N.1
  • 16
    • 43349108455 scopus 로고    scopus 로고
    • The complete genome sequence and analysis of the epsilonproteobacterium Arcobacter butzleri
    • Miller WG, Parker CT, Rubenfield M, Mendz GL, Wosten MM, et al. (2007) The complete genome sequence and analysis of the epsilonproteobacterium Arcobacter butzleri. PLoS ONE. 2: e1358. Available: http://www.plosone.org/article/info:doi/10.1371/journal.pone.0001358 Accessed 25th April 2012.
    • (2007) PLoS ONE , vol.2
    • Miller, W.G.1    Parker, C.T.2    Rubenfield, M.3    Mendz, G.L.4    Wosten, M.M.5
  • 17
    • 80655128410 scopus 로고    scopus 로고
    • Complete genome sequences of Arcobacter butzleri ED-1 and Arcobacter sp. Strain L, both isolated from a microbial fuel cell
    • Toh H, Sharma VK, Oshima K, Kondo S, Hattori M, et al. (2011) Complete genome sequences of Arcobacter butzleri ED-1 and Arcobacter sp. Strain L, both isolated from a microbial fuel cell. Journal of Bacteriology 193: 6411-6412.
    • (2011) Journal of Bacteriology , vol.193 , pp. 6411-6412
    • Toh, H.1    Sharma, V.K.2    Oshima, K.3    Kondo, S.4    Hattori, M.5
  • 18
    • 0035977375 scopus 로고    scopus 로고
    • Development of a new protocol for the isolation and quantification of Arcobacter species from poultry products
    • Houf K, Devriese LA, De Zutter L, Van Hoof J, Vandamme P, (2001) Development of a new protocol for the isolation and quantification of Arcobacter species from poultry products. Int J Food Microbiol 712: 189-196.
    • (2001) Int J Food Microbiol , vol.712 , pp. 189-196
    • Houf, K.1    Devriese, L.A.2    De Zutter, L.3    Van Hoof, J.4    Vandamme, P.5
  • 19
    • 17444410021 scopus 로고    scopus 로고
    • Prevalence and genetic diversity of Campylobacter spp. in environmental water samples from a 100-square-kilometer predominantly dairy farming area
    • Kemp R, Leatherbarrow AJ, Williams NJ, Hart CA, Clough HE, et al. (2005) Prevalence and genetic diversity of Campylobacter spp. in environmental water samples from a 100-square-kilometer predominantly dairy farming area. Appl Environ Microbiol 714: 1876-1882.
    • (2005) Appl Environ Microbiol , vol.714 , pp. 1876-1882
    • Kemp, R.1    Leatherbarrow, A.J.2    Williams, N.J.3    Hart, C.A.4    Clough, H.E.5
  • 20
    • 0025923821 scopus 로고
    • Chelex 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material
    • Walsh PS, Metzger DA, Higuchi R, (1991) Chelex 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material. Biotechniques 104: 506-513.
    • (1991) Biotechniques , vol.104 , pp. 506-513
    • Walsh, P.S.1    Metzger, D.A.2    Higuchi, R.3
  • 21
    • 0034547262 scopus 로고    scopus 로고
    • Development of a multiplex PCR assay for the simultaneous detection and identification of Arcobacter butzleri, Arcobacter cryaerophilus and Arcobacter skirrowii
    • Houf K, Tutenel A, De Zutter L, Van Hoof J, Vandamme P, (2000) Development of a multiplex PCR assay for the simultaneous detection and identification of Arcobacter butzleri, Arcobacter cryaerophilus and Arcobacter skirrowii. FEMS Microbiol Lett 193: 89-94.
    • (2000) FEMS Microbiol Lett , vol.193 , pp. 89-94
    • Houf, K.1    Tutenel, A.2    De Zutter, L.3    Van Hoof, J.4    Vandamme, P.5
  • 22
    • 0034065096 scopus 로고    scopus 로고
    • Development of a combined PCR-culture technique for the rapid detection of Arcobacter spp. in chicken meat
    • Gonzalez I, Garcia T, Antolin A, Hernandez PE, Martin R, (2000) Development of a combined PCR-culture technique for the rapid detection of Arcobacter spp. in chicken meat. Lett Appl Microbiol 30: 207-212.
    • (2000) Lett Appl Microbiol , vol.30 , pp. 207-212
    • Gonzalez, I.1    Garcia, T.2    Antolin, A.3    Hernandez, P.E.4    Martin, R.5
  • 23
    • 0036900968 scopus 로고    scopus 로고
    • Colony multiplex PCR assay for identification and differentiation of Campylobacter jejuni, C. coli, C. lari, C. upsaliensis, and C. fetus subsp. fetus
    • Wang G, Clark CG, Taylor TM, Pucknell C, Barton C, et al. (2002) Colony multiplex PCR assay for identification and differentiation of Campylobacter jejuni, C. coli, C. lari, C. upsaliensis, and C. fetus subsp. fetus. J Clin Microbiol 40: 4744-4747.
    • (2002) J Clin Microbiol , vol.40 , pp. 4744-4747
    • Wang, G.1    Clark, C.G.2    Taylor, T.M.3    Pucknell, C.4    Barton, C.5
  • 25
    • 13244267001 scopus 로고    scopus 로고
    • mlstdbNet - distributed multi-locus sequence typing MLST databases
    • Jolley KA, Chan MS, Maiden MC, (2004) mlstdbNet- distributed multi-locus sequence typing MLST databases. BMC Bioinformatics 5: 86.
    • (2004) BMC Bioinformatics , vol.5 , pp. 86
    • Jolley, K.A.1    Chan, M.S.2    Maiden, M.C.3
  • 26
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis MEGA software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S, (2007) MEGA4: Molecular Evolutionary Genetics Analysis MEGA software version 4.0. Mol Biol Evol 248: 1596-1599.
    • (2007) Mol Biol Evol , vol.248 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 29
    • 25644458211 scopus 로고    scopus 로고
    • The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes
    • Overbeek R, Begley T, Butler RM, Choudhuri JV, Chuang HY, et al. (2005) The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes. Nucleic Acids Res 33: 5691-5702.
    • (2005) Nucleic Acids Res , vol.33 , pp. 5691-5702
    • Overbeek, R.1    Begley, T.2    Butler, R.M.3    Choudhuri, J.V.4    Chuang, H.Y.5
  • 30
    • 40549120596 scopus 로고    scopus 로고
    • The RAST Server: rapid annotations using subsystems technology
    • Aziz RK, Bartels D, Best AA, DeJongh M, Disz T, et al. (2008) The RAST Server: rapid annotations using subsystems technology. BMC Genomics 9: 75.
    • (2008) BMC Genomics , vol.9 , pp. 75
    • Aziz, R.K.1    Bartels, D.2    Best, A.A.3    DeJongh, M.4    Disz, T.5
  • 31
    • 65349182240 scopus 로고    scopus 로고
    • Arcobacter mytili sp. nov., an indoxyl-acetate-hydrolysis negative bacterium isolated from mussels
    • Collado L, Cleenwerck I, Van Trappen S, De Vos P, Figueras MJ, (2009) Arcobacter mytili sp. nov., an indoxyl-acetate-hydrolysis negative bacterium isolated from mussels. Int J Syst Evol Microbiol 59: 1391-1396.
    • (2009) Int J Syst Evol Microbiol , vol.59 , pp. 1391-1396
    • Collado, L.1    Cleenwerck, I.2    Van Trappen, S.3    De Vos, P.4    Figueras, M.J.5
  • 32
    • 14944384750 scopus 로고    scopus 로고
    • Prevalence, enumeration and strain variation of Arcobacter species in the faeces of healthy cattle in Belgium
    • van Driessche E, Houf K, Vangroenweghe F, De Zutter L, Van Hoof J, (2005) Prevalence, enumeration and strain variation of Arcobacter species in the faeces of healthy cattle in Belgium. Vet Microbiol 105: 149-154.
    • (2005) Vet Microbiol , vol.105 , pp. 149-154
    • van Driessche, E.1    Houf, K.2    Vangroenweghe, F.3    De Zutter, L.4    Van Hoof, J.5
  • 34
    • 0035023531 scopus 로고    scopus 로고
    • Genotypic variation among arcobacter isolates from a farrow-to-finish swine facility
    • Hume ME, Harvey RB, Stanker LH, Droleskey RE, Poole TL, et al. (2001) Genotypic variation among arcobacter isolates from a farrow-to-finish swine facility. J Food Prot 64: 645-651.
    • (2001) J Food Prot , vol.64 , pp. 645-651
    • Hume, M.E.1    Harvey, R.B.2    Stanker, L.H.3    Droleskey, R.E.4    Poole, T.L.5
  • 35
    • 34547472148 scopus 로고    scopus 로고
    • Molecular fingerprinting of Campylobacter and Arcobacter isolated from chicken and water
    • Gonzalez A, Ferrus MA, Gonzalez R, Hernandez J, (2007) Molecular fingerprinting of Campylobacter and Arcobacter isolated from chicken and water. Int Microbiol 10: 85-90.
    • (2007) Int Microbiol , vol.10 , pp. 85-90
    • Gonzalez, A.1    Ferrus, M.A.2    Gonzalez, R.3    Hernandez, J.4
  • 36
    • 0036255109 scopus 로고    scopus 로고
    • Assessment of the genetic diversity among arcobacters isolated from poultry products by using two PCR-based typing methods
    • Houf K, De Zutter L, Van Hoof J, Vandamme P, (2002) Assessment of the genetic diversity among arcobacters isolated from poultry products by using two PCR-based typing methods. Appl Environ Microbiol 68: 2172-2178.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 2172-2178
    • Houf, K.1    De Zutter, L.2    Van Hoof, J.3    Vandamme, P.4
  • 37
    • 4544268018 scopus 로고    scopus 로고
    • Occurrence and strain diversity of Arcobacter species isolated from healthy Belgian pigs
    • van Driessche E, Houf K, Vangroenweghe F, Nollet N, De Zutter L, et al. (2004) Occurrence and strain diversity of Arcobacter species isolated from healthy Belgian pigs. Res Microbiol 155: 662-666.
    • (2004) Res Microbiol , vol.155 , pp. 662-666
    • van Driessche, E.1    Houf, K.2    Vangroenweghe, F.3    Nollet, N.4    De Zutter, L.5
  • 38
    • 33751429178 scopus 로고    scopus 로고
    • The Evolution of Two-Component Systems in Bacteria Reveals Different Strategies for Niche Adaptation
    • th April 2012
    • Alm E, Huang K, Arkin A, (2006) The Evolution of Two-Component Systems in Bacteria Reveals Different Strategies for Niche Adaptation. PLoS Comput Biol 2: e143 doi:www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.0020143 Accessed 13th April 2012" 10.1371/journal.pcbi.0020143. Available: www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.0020143 Accessed 13th April 2012.
    • (2006) PLoS Comput Biol , vol.2
    • Alm, E.1    Huang, K.2    Arkin, A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.