-
1
-
-
61449257456
-
Adaptations to submarine hydrothermal environments exemplified by the genome of nautilia profundicola
-
doi:10.1371/journal.pgen.1000362
-
Campbell, B. J., Smith, J. L., Hanson, T. E., Klotz, M. G., Stein, L. Y., Lee, C. K., et al. (2009). Adaptations to submarine hydrothermal environments exemplified by the genome of nautilia profundicola. PLoS Genet. 5, e1000362. doi:10.1371/journal.pgen.1000362
-
(2009)
PLoS Genet
, vol.5
-
-
Campbell, B.J.1
Smith, J.L.2
Hanson, T.E.3
Klotz, M.G.4
Stein, L.Y.5
Lee, C.K.6
-
2
-
-
58149200948
-
The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
-
Cole, J. R., Wang, Q., Cardenas, E., Fish, J., Chai, B., Farris, R. J., et al. (2009). The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res. 37, D141-D145.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Cole, J.R.1
Wang, Q.2
Cardenas, E.3
Fish, J.4
Chai, B.5
Farris, R.J.6
-
3
-
-
79551491148
-
Proteins and protein complexes involved in the biochemical reactions of anaerobic ammonium-oxidizing bacteria
-
de Almeida, N. M., Maalcke, W. J., Keltjens, J. T., Jetten, M. S. M., and Kartal, B. (2011). Proteins and protein complexes involved in the biochemical reactions of anaerobic ammonium-oxidizing bacteria. Biochem. Soc. Trans. 39, 303-308.
-
(2011)
Biochem. Soc. Trans.
, vol.39
, pp. 303-308
-
-
De Almeida, N.M.1
Maalcke, W.J.2
Keltjens, J.T.3
Jetten, M.S.M.4
Kartal, B.5
-
4
-
-
77950258771
-
Nitritedriven anaerobic methane oxidation by oxygenic bacteria
-
Ettwig, K. F., Butler, M. K., Le Paslier, D., Pelletier, E., Mangenot, S., Kuypers, M. M. M., et al. (2010). Nitritedriven anaerobic methane oxidation by oxygenic bacteria. Nature 464, 543-548.
-
(2010)
Nature
, vol.464
, pp. 543-548
-
-
Ettwig, K.F.1
Butler, M.K.2
Le Paslier, D.3
Pelletier, E.4
Mangenot, S.5
Kuypers, M.M.M.6
-
5
-
-
84861340985
-
Nitrite oxidation in the Namibian oxygen minimum zone
-
Fussel, J., Lam, P., Lavik, G., Jensen, M. M., Holtappels, M., Gunter, M., et al. (2012). Nitrite oxidation in the Namibian oxygen minimum zone. ISME J. 6, 1200-1209.
-
(2012)
ISME J
, vol.6
, pp. 1200-1209
-
-
Fussel, J.1
Lam, P.2
Lavik, G.3
Jensen, M.M.4
Holtappels, M.5
Gunter, M.6
-
6
-
-
81855220912
-
The metagenomic basis of anammox metabolism in Candidatus "Brocadia fulgida"
-
Gori, F., Tringe, S. G., Kartal, B., Marchiori, E., and Jetten, M. S. M. (2011). The metagenomic basis of anammox metabolism in Candidatus "Brocadia fulgida". Biochem. Soc. Trans. 39, 1799-1804.
-
(2011)
Biochem. Soc. Trans.
, vol.39
, pp. 1799-1804
-
-
Gori, F.1
Tringe, S.G.2
Kartal, B.3
Marchiori, E.4
Jetten, M.S.M.5
-
7
-
-
34248190868
-
Anaerobic ammonium oxidation in the Peruvian oxygen minimum zone
-
Hamersley, M. R., Lavik, G., Woebken, D., Rattray, J. E., Lam, P., Hopmans, E. C., et al. (2007). Anaerobic ammonium oxidation in the Peruvian oxygen minimum zone. Limnol. Oceanogr. 52, 923-933.
-
(2007)
Limnol. Oceanogr.
, vol.52
, pp. 923-933
-
-
Hamersley, M.R.1
Lavik, G.2
Woebken, D.3
Rattray, J.E.4
Lam, P.5
Hopmans, E.C.6
-
8
-
-
84856184050
-
Hydrazine synthase, a unique phylomarker with which to study the presence and biodiversity of anammox bacteria
-
Harhangi, H. R., Le Roy, M., van Alen, T., Hu, B. L., Groen, J., Kartal, B., et al. (2012). Hydrazine synthase, a unique phylomarker with which to study the presence and biodiversity of anammox bacteria. Appl. Environ. Microbiol. 78, 752-758.
-
(2012)
Appl. Environ. Microbiol.
, vol.78
, pp. 752-758
-
-
Harhangi, H.R.1
Le Roy, M.2
Van Alen, T.3
Hu, B.L.4
Groen, J.5
Kartal, B.6
-
9
-
-
84861623768
-
Anammox organism KSU1 expresses a NirK-type coppercontaining nitrite reductase instead of a NirS-type with cytochrome cd1
-
Hira, D., Toh, H., Migita, C., Okubo, H., Nishiyama, T., Hattori, M., et al. (2012). Anammox organism KSU1 expresses a NirK-type coppercontaining nitrite reductase instead of a NirS-type with cytochrome cd1. FEBS Letters 586, 1658-1663.
-
(2012)
FEBS Letters
, vol.586
, pp. 1658-1663
-
-
Hira, D.1
Toh, H.2
Migita, C.3
Okubo, H.4
Nishiyama, T.5
Hattori, M.6
-
10
-
-
77149154647
-
Molecular detection of anammox bacteria in terrestrial ecosystems: distribution and diversity
-
Humbert, S., Tarnawski, S., Fromin, N., Mallet, M.-P., Aragno, M., and Zopfi, J. (2010). Molecular detection of anammox bacteria in terrestrial ecosystems: distribution and diversity. ISME J. 4, 450-454.
-
(2010)
ISME J
, vol.4
, pp. 450-454
-
-
Humbert, S.1
Tarnawski, S.2
Fromin, N.3
Mallet, M.-P.4
Aragno, M.5
Zopfi, J.6
-
11
-
-
81855204176
-
Description of the order Brocadiales
-
eds N. R. Krieg, J. T. Staley, B. P. Hedlund, B. J. Paster, N. Ward, W. Ludwig, and W. B. Whitman (Heidelberg: Springer)
-
Jetten, M. S. M., Op den Camp, H. J. M., Kuenen, J. G., and Strous, M. (2010). "Description of the order Brocadiales," in Bergey's Manual of Systematic Bacteriology: The Bacteroidetes, Spirochaetes, Tenericutes (Mollicutes), Acidobacteria, Fibrobacteres, Fusobacteria, Dictyoglomi, Gemmatimonadetes, Lentisphaerae, Verrucomicrobia, Chlamydiae, and Planctomycetes, Vol. 4, eds N. R. Krieg, J. T. Staley, B. P. Hedlund, B. J. Paster, N. Ward, W. Ludwig, and W. B. Whitman (Heidelberg: Springer), 506-603.
-
(2010)
Bergey's Manual of Systematic Bacteriology: The Bacteroidetes, Spirochaetes, Tenericutes (Mollicutes), Acidobacteria, Fibrobacteres, Fusobacteria, Dictyoglomi, Gemmatimonadetes, Lentisphaerae, Verrucomicrobia, Chlamydiae, and Planctomycetes
, vol.4
, pp. 506-603
-
-
Jetten, M.S.M.1
Op Den Camp, H.J.M.2
Kuenen, J.G.3
Strous, M.4
-
12
-
-
0030741612
-
Towards a more sustainable municipal wastewater treatment system
-
Jetten, M. S. M., Horn, S. J., and vanLoosdrecht, M. C. M. (1997). Towards a more sustainable municipal wastewater treatment system. Water Sci. Technol. 35, 171-180.
-
(1997)
Water Sci. Technol.
, vol.35
, pp. 171-180
-
-
Jetten, M.S.M.1
Horn, S.J.2
Van Loosdrecht, M.C.M.3
-
13
-
-
70350520211
-
Biochemistry and molecular biology of anammox bacteria
-
Jetten, M. S. M., van Niftrik, L., Strous, M., Kartal, B., Keltjens, J. T., and Op den Camp, H. J. M. (2009). Biochemistry and molecular biology of anammox bacteria. Crit. Rev. Biochem. Mol. Biol. 44, 65-84.
-
(2009)
Crit. Rev. Biochem. Mol. Biol.
, vol.44
, pp. 65-84
-
-
Jetten, M.S.M.1
Van Niftrik, L.2
Strous, M.3
Kartal, B.4
Keltjens, J.T.5
Op Den Camp, H.J.M.6
-
14
-
-
77952135313
-
Sewage treatment with anammox
-
Kartal, B., Kuenen, J. G., and van Loosdrecht, M. C. M. (2010). Sewage treatment with anammox. Science 328, 702-703.
-
(2010)
Science
, vol.328
, pp. 702-703
-
-
Kartal, B.1
Kuenen, J.G.2
Van Loosdrecht, M.C.M.3
-
15
-
-
80455122803
-
Molecular mechanism of anaerobic ammonium oxidation
-
Kartal, B., Maalcke, W. J., de Almeida, N. M., Cirpus, I., Gloerich, J., Geerts, W., et al. (2011). Molecular mechanism of anaerobic ammonium oxidation. Nature 479, U127-U159.
-
(2011)
Nature
, vol.479
-
-
Kartal, B.1
Maalcke, W.J.2
de Almeida, N.M.3
Cirpus, I.4
Gloerich, J.5
Geerts, W.6
-
16
-
-
18144367022
-
Massive nitrogen loss from the Benguela upwelling system through anaerobic ammonium oxidation
-
Kuypers, M. M. M., Lavik, G., Woebken, D., Schmid, M., Fuchs, B. M., Amann, R., Jorgensen, B. B., and Jetten, M. S. M. (2005). Massive nitrogen loss from the Benguela upwelling system through anaerobic ammonium oxidation. Proc. Natl. Acad. Sci. U.S.A. 102, 6478-6483.
-
(2005)
Proc. Natl. Acad. Sci. U. S. A.
, vol.102
, pp. 6478-6483
-
-
Kuypers, M.M.M.1
Lavik, G.2
Woebken, D.3
Schmid, M.4
Fuchs, B.M.5
Amann, R.6
Jorgensen, B.B.7
Jetten, M.S.M.8
-
17
-
-
78650936059
-
Microbial nitrogen cycling processes in oxygen minimum zones
-
Lam, P., and Kuypers, M. M. M. (2011). Microbial nitrogen cycling processes in oxygen minimum zones. Annu. Rev. Mar. Sci. 3, 317-345.
-
(2011)
Annu. Rev. Mar. Sci.
, vol.3
, pp. 317-345
-
-
Lam, P.1
Kuypers, M.M.M.2
-
18
-
-
34547588704
-
KAAS: an automatic genome annotation and pathway reconstruction server
-
Moriya, Y., Itoh, M., Okuda, S., Yoshizawa, A. C., and Kanehisa, M. (2007). KAAS: an automatic genome annotation and pathway reconstruction server. Nucleic Acids Res. 35, W182-W185.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Moriya, Y.1
Itoh, M.2
Okuda, S.3
Yoshizawa, A.C.4
Kanehisa, M.5
-
19
-
-
52949144536
-
Diversity of ammonium-oxidizing bacteria in a granular sludge anaerobic ammonium-oxidizing (anammox) reactor
-
Quan, Z.-X., Rhee, S.-K., Zuo, J.-E., Yang, Y., Bae, J.-W., Park, J. R., Lee, S.-T., and Park, Y.-H. (2008). Diversity of ammonium-oxidizing bacteria in a granular sludge anaerobic ammonium-oxidizing (anammox) reactor. Environ. Microbiol. 10, 3130-3139.
-
(2008)
Environ. Microbiol.
, vol.10
, pp. 3130-3139
-
-
Quan, Z.-X.1
Rhee, S.-K.2
Zuo, J.-E.3
Yang, Y.4
Bae, J.-W.5
Park, J.R.6
Lee, S.-T.7
Park, Y.-H.8
-
20
-
-
2942590219
-
Stable carbon isotopic fractionations associated with inorganic carbon fixation by anaerobic ammonium-oxidizing bacteria
-
Schouten,S.,Strous,M.,Kuypers,M. M. M., Rijpstra,W. I. C., Baas, M., Schubert, C. J., et al. (2004). Stable carbon isotopic fractionations associated with inorganic carbon fixation by anaerobic ammonium-oxidizing bacteria. Appl. Environ. Microbiol. 70, 3785-3788.
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 3785-3788
-
-
Schouten, S.1
Strous, M.2
Kuypers, M.M.M.3
Rijpstra, W.I.C.4
Baas, M.5
Schubert, C.J.6
-
21
-
-
41149136135
-
Anammox brings WWTP closer to energy autarky due to increased biogas production and reduced aeration energy for N-removal
-
Siegrist,H.,Salzgeber,D.,Eugster,J.,and Joss, A. (2008). Anammox brings WWTP closer to energy autarky due to increased biogas production and reduced aeration energy for N-removal. Water Sci. Technol. 57, 383-388.
-
(2008)
Water Sci. Technol.
, vol.57
, pp. 383-388
-
-
Siegrist, H.1
Salzgeber, D.2
Eugster, J.3
Joss, A.4
-
22
-
-
33645741019
-
Deciphering the evolution and metabolism of an anammox bacterium from a community genome
-
Strous, M., Pelletier, E., Mangenot, S., Rattei, T., Lehner, A., Taylor, M. W., et al. (2006). Deciphering the evolution and metabolism of an anammox bacterium from a community genome. Nature 440, 790-794.
-
(2006)
Nature
, vol.440
, pp. 790-794
-
-
Strous, M.1
Pelletier, E.2
Mangenot, S.3
Rattei, T.4
Lehner, A.5
Taylor, M.W.6
-
23
-
-
79957613599
-
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance,and maximum parsimony methods
-
Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., and Kumar, S. (2011). MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance,and maximum parsimony methods. Mol. Biol. Evol. 28, 2731-2739.
-
(2011)
Mol. Biol. Evol.
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
24
-
-
0036197004
-
Production of N-2 through anaerobic ammonium oxidation coupled to nitrate reduction in marine sediments
-
Thamdrup,B.,and Dalsgaard,T. (2002). Production of N-2 through anaerobic ammonium oxidation coupled to nitrate reduction in marine sediments. Appl. Environ. Microbiol. 68, 1312-1318.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 1312-1318
-
-
Thamdrup, B.1
Dalsgaard, T.2
-
25
-
-
84876498355
-
The metagenome of the marine anammox bacterium "Candidatus Scalindua profunda" illustrates the versatility of this globally important nitrogen cycle bacteriumem
-
doi: 10.1111/j.1462-2920.2012.02774.x
-
Van de Vossenberg, J., Woebken, D., Maalcke, W. J., Wessels, H. J. C. T., Dutilh, B. E., Kartal, B., et al. (2012). The metagenome of the marine anammox bacterium "Candidatus Scalindua profunda" illustrates the versatility of this globally important nitrogen cycle bacteriumem. Environ. Microbiol. doi: 10.1111/j.1462-2920.2012.02774.x
-
(2012)
Environ. Microbiol.
-
-
Van De Vossenberg, J.1
Woebken, D.2
Maalcke, W.J.3
Wessels, H.J.C.T.4
Dutilh, B.E.5
Kartal, B.6
-
26
-
-
0034742536
-
The SHARON((R))-Anammox((R)) process for treatment of ammonium rich wastewater
-
Van Dongen, U., Jetten, M. S. M., and van Loosdrecht, M. C. M. (2001). The SHARON((R))-Anammox((R)) process for treatment of ammonium rich wastewater. Water Sci. Technol. 44, 153-160.
-
(2001)
Water Sci. Technol
, vol.44
, pp. 153-160
-
-
Van Dongen, U.1
Jetten, M.S.M.2
van Loosdrecht, M.C.M.3
-
27
-
-
84865747879
-
Anaerobic ammonium-oxidizing bacteria: unique microorganisms with exceptional properties
-
van Niftrik, L., and Jetten, M. S. M. (2012). Anaerobic ammonium-oxidizing bacteria: unique microorganisms with exceptional properties. Microbiol. Mol. Biol. Rev. 76, 585-596.
-
(2012)
Microbiol. Mol. Biol. Rev.
, vol.76
, pp. 585-596
-
-
Van Niftrik, L.1
Jetten, M.S.M.2
-
28
-
-
81455132878
-
Bacterial biodiversity from an anaerobic up flow bioreactor with ANAMMOX Activity Inoculated with swine sludge
-
Viancelli, A., Kunz, A., Esteves, P. A., Bauermann, F. V., Furukawa, K., Fujii, T., et al. (2011). Bacterial biodiversity from an anaerobic up flow bioreactor with ANAMMOX Activity Inoculated with swine sludge. Braz. Arch. Biol. Technol. 54, 1035-1041.
-
(2011)
Braz. Arch. Biol. Technol.
, vol.54
, pp. 1035-1041
-
-
Viancelli, A.1
Kunz, A.2
Esteves, P.A.3
Bauermann, F.V.4
Furukawa, K.5
Fujii, T.6
-
29
-
-
84863049441
-
MetaCluster 4.0: a novel binning algorithm for ngs reads and huge number of species
-
Wang, Y., Leung, H. C. M., Yiu, S. M., and Chin, F. Y. L. (2012). MetaCluster 4.0: a novel binning algorithm for ngs reads and huge number of species. J. Comput. Biol. 19,241-249.
-
(2012)
J. Comput. Biol.
, vol.19
, pp. 241-249
-
-
Wang, Y.1
Leung, H.C.M.2
Yiu, S.M.3
Chin, F.Y.L.4
|