메뉴 건너뛰기




Volumn 24, Issue 12, 2013, Pages 4837-4849

miR156 and miR390 regulate tasiRNA accumulation and developmental timing in physcomitrella patens

Author keywords

[No Author keywords available]

Indexed keywords


EID: 84873033996     PISSN: 10404651     EISSN: 1532298X     Source Type: Journal    
DOI: 10.1105/tpc.112.103176     Document Type: Article
Times cited : (121)

References (42)
  • 1
    • 73249121905 scopus 로고    scopus 로고
    • Sliced microRNA targets and precise loop-first processing of MIR319 hairpins revealed by analysis of the Physcomitrella patens degradome
    • Addo-Quaye, C., Snyder, J.A., Park, Y.B., Li, Y.F., Sunkar, R., and Axtell, M.J. (2009). Sliced microRNA targets and precise loop-first processing of MIR319 hairpins revealed by analysis of the Physcomitrella patens degradome. RNA 15: 2112-2121.
    • (2009) RNA , vol.15 , pp. 2112-2121
    • Addo-Quaye, C.1    Snyder, J.A.2    Park, Y.B.3    Li, Y.F.4    Sunkar, R.5    Axtell, M.J.6
  • 4
    • 84870515741 scopus 로고    scopus 로고
    • DICER-LIKE3 activity in Physcomitrella patens DICER-LIKE4 mutants causes severe developmental dysfunction and sterility
    • Arif, M.A., Fattash, I., Ma, Z., Cho, S.H., Beike, A.K., Reski, R., Axtell, M.J., and Frank, W. (2012). DICER-LIKE3 activity in Physcomitrella patens DICER-LIKE4 mutants causes severe developmental dysfunction and sterility. Mol. Plant 5: 1281-1294.
    • (2012) Mol. Plant , vol.5 , pp. 1281-1294
    • Arif, M.A.1    Fattash, I.2    Ma, Z.3    Cho, S.H.4    Beike, A.K.5    Reski, R.6    Axtell, M.J.7    Frank, W.8
  • 5
    • 0017404566 scopus 로고
    • The isolation and preliminary characterization of auxotropic and analogue-resistant mutants of the moss Physcomitrella patens
    • Ashton, N.W., and Cove, D.J. (1977). The isolation and preliminary characterization of auxotropic and analogue-resistant mutants of the moss Physcomitrella patens. Mol. Gen. Genet. 154: 87-95.
    • (1977) Mol. Gen. Genet , vol.154 , pp. 87-95
    • Ashton, N.W.1    Cove, D.J.2
  • 6
    • 0242361521 scopus 로고    scopus 로고
    • Regulation of flowering time and floral organ identity by a microRNA and its APETALA2-like target genes
    • Aukerman, M.J., and Sakai, H. (2003). Regulation of flowering time and floral organ identity by a microRNA and its APETALA2-like target genes. Plant Cell 15: 2730-2741.
    • (2003) Plant Cell , vol.15 , pp. 2730-2741
    • Aukerman, M.J.1    Sakai, H.2
  • 7
    • 22144457368 scopus 로고    scopus 로고
    • Antiquity of microRNAs and their targets in land plants
    • Axtell, M.J., and Bartel, D.P. (2005). Antiquity of microRNAs and their targets in land plants. Plant Cell 17: 1658-1673.
    • (2005) Plant Cell , vol.17 , pp. 1658-1673
    • Axtell, M.J.1    Bartel, D.P.2
  • 8
    • 43449118038 scopus 로고    scopus 로고
    • Evolution of plant microRNAs and their targets
    • Axtell, M.J., and Bowman, J.L. (2008). Evolution of plant microRNAs and their targets. Trends Plant Sci. 13: 343-349.
    • (2008) Trends Plant Sci , vol.13 , pp. 343-349
    • Axtell, M.J.1    Bowman, J.L.2
  • 9
    • 33750440526 scopus 로고    scopus 로고
    • A two-hit trigger for siRNA biogenesis in plants
    • Axtell, M.J., Jan, C., Rajagopalan, R., and Bartel, D.P. (2006). A two-hit trigger for siRNA biogenesis in plants. Cell 127: 565-577.
    • (2006) Cell , vol.127 , pp. 565-577
    • Axtell, M.J.1    Jan, C.2    Rajagopalan, R.3    Bartel, D.P.4
  • 10
    • 34547668337 scopus 로고    scopus 로고
    • Common functions for diverse small RNAs of land plants
    • Axtell, M.J., Snyder, J.A., and Bartel, D.P. (2007). Common functions for diverse small RNAs of land plants. Plant Cell 19: 1750-1769.
    • (2007) Plant Cell , vol.19 , pp. 1750-1769
    • Axtell, M.J.1    Snyder, J.A.2    Bartel, D.P.3
  • 11
    • 79956309501 scopus 로고    scopus 로고
    • The Selaginella genome identifies genetic changes associated with the evolution of vascular plants
    • Banks, J.A., et al. (2011). The Selaginella genome identifies genetic changes associated with the evolution of vascular plants. Science 332: 960-963.
    • (2011) Science , vol.332 , pp. 960-963
    • Banks, J.A.1
  • 12
    • 77953468729 scopus 로고    scopus 로고
    • In Plant Epigenetics, I. Kovalchuk and F.J. Zemp, eds (Totowa, NJ: Humana Press)
    • Blevins, T. (2010). Northern blotting techniques for small RNAs. In Plant Epigenetics, I. Kovalchuk and F.J. Zemp, eds (Totowa, NJ: Humana Press), pp. 87-107.
    • (2010) Northern blotting techniques for small RNAs , pp. 87-107
    • Blevins, T.1
  • 13
    • 1642366133 scopus 로고    scopus 로고
    • A microRNA as a translational repressor of APETALA2 in Arabidopsis flower development
    • Chen, X. (2004). A microRNA as a translational repressor of APETALA2 in Arabidopsis flower development. Science 303: 2022-2025.
    • (2004) Science , vol.303 , pp. 2022-2025
    • Chen, X.1
  • 14
    • 58149163280 scopus 로고    scopus 로고
    • Physcomitrella patens DCL3 is required for 22-24 nt siRNA accumulation, suppression of retrotransposon-derived transcripts, and normal development
    • Cho, S.H., Addo-Quaye, C., Coruh, C., Arif, M.A., Ma, Z., Frank, W., and Axtell, M.J. (2008). Physcomitrella patens DCL3 is required for 22-24 nt siRNA accumulation, suppression of retrotransposon-derived transcripts, and normal development. PLoS Genet. 4: e1000314.
    • (2008) PLoS Genet , vol.4
    • Cho, S.H.1    Addo-Quaye, C.2    Coruh, C.3    Arif, M.A.4    Ma, Z.5    Frank, W.6    Axtell, M.J.7
  • 15
    • 0027135653 scopus 로고
    • The moss Physcomitrella patens, a model system with potential for the study of plant reproduction
    • Cove, D.J., and Knight, C.D. (1993). The moss Physcomitrella patens, a model system with potential for the study of plant reproduction. Plant Cell 5: 1483-1488.
    • (1993) Plant Cell , vol.5 , pp. 1483-1488
    • Cove, D.J.1    Knight, C.D.2
  • 16
    • 79953086307 scopus 로고    scopus 로고
    • Evolution and functional diversification of MIRNA genes
    • Cuperus, J.T., Fahlgren, N., and Carrington, J.C. (2011). Evolution and functional diversification of MIRNA genes. Plant Cell 23: 431-442.
    • (2011) Plant Cell , vol.23 , pp. 431-442
    • Cuperus, J.T.1    Fahlgren, N.2    Carrington, J.C.3
  • 17
    • 33646165249 scopus 로고    scopus 로고
    • Regulation of AUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis
    • Fahlgren, N., Montgomery, T.A., Howell, M.D., Allen, E., Dvorak, S.K., Alexander, A.L., and Carrington, J.C. (2006). Regulation of AUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis. Curr. Biol. 16: 939-944.
    • (2006) Curr. Biol , vol.16 , pp. 939-944
    • Fahlgren, N.1    Montgomery, T.A.2    Howell, M.D.3    Allen, E.4    Dvorak, S.K.5    Alexander, A.L.6    Carrington, J.C.7
  • 19
    • 33646192268 scopus 로고    scopus 로고
    • Specification of leaf polarity in Arabidopsis via the trans-acting siRNA pathway
    • Garcia, D., Collier, S.A., Byrne, M.E., and Martienssen, R.A. (2006). Specification of leaf polarity in Arabidopsis via the trans-acting siRNA pathway. Curr. Biol. 16: 933-938.
    • (2006) Curr. Biol , vol.16 , pp. 933-938
    • Garcia, D.1    Collier, S.A.2    Byrne, M.E.3    Martienssen, R.A.4
  • 20
    • 80052443858 scopus 로고    scopus 로고
    • The control of developmental phase transitions in plants
    • Huijser, P., and Schmid, M. (2011). The control of developmental phase transitions in plants. Development 138: 4117-4129.
    • (2011) Development , vol.138 , pp. 4117-4129
    • Huijser, P.1    Schmid, M.2
  • 21
    • 0141726771 scopus 로고    scopus 로고
    • The Arabidopsis heterochronic gene ZIPPY is an ARGONAUTE family member
    • Hunter, C., Sun, H., and Poethig, R.S. (2003). The Arabidopsis heterochronic gene ZIPPY is an ARGONAUTE family member. Curr. Biol. 13: 1734-1739.
    • (2003) Curr. Biol , vol.13 , pp. 1734-1739
    • Hunter, C.1    Sun, H.2    Poethig, R.S.3
  • 24
    • 34250174230 scopus 로고    scopus 로고
    • An ancient mechanism controls the development of cells with a rooting function in land plants
    • Menand, B., Yi, K., Jouannic, S., Hoffmann, L., Ryan, E., Linstead, P., Schaefer, D.G., and Dolan, L. (2007). An ancient mechanism controls the development of cells with a rooting function in land plants. Science 316: 1477-1480.
    • (2007) Science , vol.316 , pp. 1477-1480
    • Menand, B.1    Yi, K.2    Jouannic, S.3    Hoffmann, L.4    Ryan, E.5    Linstead, P.6    Schaefer, D.G.7    Dolan, L.8
  • 25
    • 34147154680 scopus 로고    scopus 로고
    • Two small regulatory RNAs establish opposing fates of a developmental axis
    • Nogueira, F.T., Madi, S., Chitwood, D.H., Juarez, M.T., and Timmermans, M.C. (2007). Two small regulatory RNAs establish opposing fates of a developmental axis. Genes Dev. 21: 750-755.
    • (2007) Genes Dev , vol.21 , pp. 750-755
    • Nogueira, F.T.1    Madi, S.2    Chitwood, D.H.3    Juarez, M.T.4    Timmermans, M.C.5
  • 26
    • 44949098384 scopus 로고    scopus 로고
    • Improved northern blot method for enhanced detection of small RNA
    • Pall, G.S., and Hamilton, A.J. (2008). Improved northern blot method for enhanced detection of small RNA. Nat. Protoc. 3: 1077-1084.
    • (2008) Nat. Protoc , vol.3 , pp. 1077-1084
    • Pall, G.S.1    Hamilton, A.J.2
  • 27
    • 4644286235 scopus 로고    scopus 로고
    • SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis
    • Peragine, A., Yoshikawa, M., Wu, G., Albrecht, H.L., and Poethig, R.S. (2004). SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis. Genes Dev. 18: 2368-2379.
    • (2004) Genes Dev , vol.18 , pp. 2368-2379
    • Peragine, A.1    Yoshikawa, M.2    Wu, G.3    Albrecht, H.L.4    Poethig, R.S.5
  • 28
    • 68949161539 scopus 로고    scopus 로고
    • Small RNAs and developmental timing in plants
    • Poethig, R.S. (2009). Small RNAs and developmental timing in plants. Curr. Opin. Genet. Dev. 19: 374-378.
    • (2009) Curr. Opin. Genet. Dev , vol.19 , pp. 374-378
    • Poethig, R.S.1
  • 29
    • 34548497157 scopus 로고    scopus 로고
    • Comparative analysis of the SBP-box gene families in P patens and seed plants
    • Riese, M., Höhmann, S., Saedler, H., Münster, T., and Huijser, P. (2007). Comparative analysis of the SBP-box gene families in P. patens and seed plants. Gene 401: 28-37.
    • (2007) Gene , vol.401 , pp. 28-37
    • Riese, M.1    Höhmann, S.2    Saedler, H.3    Münster, T.4    Huijser, P.5
  • 30
    • 79551624964 scopus 로고    scopus 로고
    • MicroRNA534a control of BLADEON-PETIOLE 1 and 2 mediates juvenile-to-adult gametophyte transition in Physcomitrella patens
    • Saleh, O., Issman, N., Seumel, G.I., Stav, R., Samach, A., Reski, R., Frank, W., and Arazi, T. (2011). MicroRNA534a control of BLADEON-PETIOLE 1 and 2 mediates juvenile-to-adult gametophyte transition in Physcomitrella patens. Plant J. 65: 661-674.
    • (2011) Plant J , vol.65 , pp. 661-674
    • Saleh, O.1    Issman, N.2    Seumel, G.I.3    Stav, R.4    Samach, A.5    Reski, R.6    Frank, W.7    Arazi, T.8
  • 32
    • 0031170922 scopus 로고    scopus 로고
    • Efficient gene targeting in the moss Physcomitrella patens
    • Schaefer, D.G., and Zrÿd, J.P. (1997). Efficient gene targeting in the moss Physcomitrella patens. Plant J. 11: 1195-1206.
    • (1997) Plant J , vol.11 , pp. 1195-1206
    • Schaefer, D.G.1    Zrÿd, J.P.2
  • 33
    • 0031429061 scopus 로고    scopus 로고
    • Programmed changes in form during moss development
    • Schumaker, K.S., and Dietrich, M.A. (1997). Programmed changes in form during moss development. Plant Cell 9: 1099-1107.
    • (1997) Plant Cell , vol.9 , pp. 1099-1107
    • Schumaker, K.S.1    Dietrich, M.A.2
  • 35
    • 33750560215 scopus 로고    scopus 로고
    • Identification of trans-acting siRNAs in moss and an RNA-dependent RNA polymerase required for their biogenesis
    • Talmor-Neiman, M., Stav, R., Klipcan, L., Buxdorf, K., Baulcombe, D.C., and Arazi, T. (2006). Identification of trans-acting siRNAs in moss and an RNA-dependent RNA polymerase required for their biogenesis. Plant J. 48: 511-521.
    • (2006) Plant J , vol.48 , pp. 511-521
    • Talmor-Neiman, M.1    Stav, R.2    Klipcan, L.3    Buxdorf, K.4    Baulcombe, D.C.5    Arazi, T.6
  • 36
    • 17644383427 scopus 로고    scopus 로고
    • Diversification of gene function: Homologs of the floral regulator FLO/LFY control the first zygotic cell division in the moss Physcomitrella patens
    • Tanahashi, T., Sumikawa, N., Kato, M., and Hasebe, M. (2005). Diversification of gene function: Homologs of the floral regulator FLO/LFY control the first zygotic cell division in the moss Physcomitrella patens. Development 132: 1727-1736.
    • (2005) Development , vol.132 , pp. 1727-1736
    • Tanahashi, T.1    Sumikawa, N.2    Kato, M.3    Hasebe, M.4
  • 37
    • 77957328824 scopus 로고    scopus 로고
    • A collection of target mimics for comprehensive analysis of microRNA function in Arabidopsis thaliana
    • Todesco, M., Rubio-Somoza, I., Paz-Ares, J., and Weigel, D. (2010). A collection of target mimics for comprehensive analysis of microRNA function in Arabidopsis thaliana. PLoS Genet. 6: e1001031.
    • (2010) PLoS Genet , vol.6
    • Todesco, M.1    Rubio-Somoza, I.2    Paz-Ares, J.3    Weigel, D.4
  • 38
    • 38849140922 scopus 로고    scopus 로고
    • Protocol: A highly sensitive RT-PCR method for detection and quantification of microRNAs
    • Varkonyi-Gasic, E., Wu, R., Wood, M., Walton, E.F., and Hellens, R.P. (2007). Protocol: A highly sensitive RT-PCR method for detection and quantification of microRNAs. Plant Methods 3: 12.
    • (2007) Plant Methods , vol.3 , pp. 12
    • Varkonyi-Gasic, E.1    Wu, R.2    Wood, M.3    Walton, E.F.4    Hellens, R.P.5
  • 39
    • 68749095252 scopus 로고    scopus 로고
    • miR156-regulated SPL transcription factors define an endogenous flowering pathway in Arabidopsis thaliana
    • Wang, J.W., Czech, B., and Weigel, D. (2009). miR156-regulated SPL transcription factors define an endogenous flowering pathway in Arabidopsis thaliana. Cell 138: 738-749.
    • (2009) Cell , vol.138 , pp. 738-749
    • Wang, J.W.1    Czech, B.2    Weigel, D.3
  • 40
    • 68749100821 scopus 로고    scopus 로고
    • The sequential action of miR156 and miR172 regulates developmental timing in Arabidopsis
    • Wu, G., Park, M.Y., Conway, S.R., Wang, J.W., Weigel, D., and Poethig, R.S. (2009). The sequential action of miR156 and miR172 regulates developmental timing in Arabidopsis. Cell 138: 750-759.
    • (2009) Cell , vol.138 , pp. 750-759
    • Wu, G.1    Park, M.Y.2    Conway, S.R.3    Wang, J.W.4    Weigel, D.5    Poethig, R.S.6
  • 41
    • 33750373240 scopus 로고    scopus 로고
    • Temporal regulation of shoot development in Arabidopsis thaliana by miR156 and its target SPL3
    • Wu, G., and Poethig, R.S. (2006). Temporal regulation of shoot development in Arabidopsis thaliana by miR156 and its target SPL3. Development 133: 3539-3547.
    • (2006) Development , vol.133 , pp. 3539-3547
    • Wu, G.1    Poethig, R.S.2
  • 42
    • 82955207556 scopus 로고    scopus 로고
    • MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, transacting siRNAs
    • Zhai, J., et al. (2011). MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, transacting siRNAs. Genes Dev. 25: 2540-2553.
    • (2011) Genes Dev , vol.25 , pp. 2540-2553
    • Zhai, J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.