-
1
-
-
8844227502
-
Population history and natural selection shape patterns of genetic variation in 132 genes
-
Akey, J. M.,M. A. Eberle, M. J. Rieder, C. S. Carlson,M.D. Shriver, D. A. Nickerson, and L. Kruglyak. 2004. Population history and natural selection shape patterns of genetic variation in 132 genes. Plos Biol. 2:1591-1599.
-
(2004)
Plos Biol
, vol.2
, pp. 1591-1599
-
-
Akey, J.M.1
Eberle, M.A.2
Rieder, M.J.3
Carlson, C.S.4
Shriver, M.D.5
Nickerson, D.A.6
Kruglyak, L.7
-
2
-
-
2942526369
-
Male-biased mutation rate and divergence in autosomal Z-linked andW-linked introns of chicken and turkey
-
Axelsson, E., N. G. C. Smith, H. Sundstrom, S. Berlin, and H. Ellegren. 2004. Male-biased mutation rate and divergence in autosomal, Z-linked andW-linked introns of chicken and turkey. Mol. Biol. Evol. 21:1538-1547.
-
(2004)
Mol. Biol. Evol.
, vol.21
, pp. 1538-1547
-
-
Axelsson, E.1
Smith, N.G.C.2
Sundstrom, H.3
Berlin, S.4
Ellegren, H.5
-
3
-
-
79953908387
-
Sex- and species-biased gene flow in a spotted eagle hybrid zone
-
Backström, N., and U. Väli. 2011. Sex- and species-biased gene flow in a spotted eagle hybrid zone. BMC Evol. Biol. 11:100.
-
(2011)
BMC Evol. Biol.
, vol.11
, pp. 100
-
-
Backström, N.1
Väli, U.2
-
4
-
-
78650005699
-
A high-density scan of the Z chromosome in Ficedula flycatchers erveals candidate loci for diversifying selection
-
Backström, N., J. Lindell, Y. Zhang, E. Palkopoulou, A. Qvarnstrom, G. P. Sætre, and H. Ellegren. 2010. A high-density scan of the Z chromosome in Ficedula flycatchers erveals candidate loci for diversifying selection. Evolution 64:3461-3475.
-
(2010)
Evolution
, vol.64
, pp. 3461-3475
-
-
Backström, N.1
Lindell, J.2
Zhang, Y.3
Palkopoulou, E.4
Qvarnstrom, A.5
Sætre, G.P.6
Ellegren, H.7
-
5
-
-
8644243850
-
ChickenW: a genetically uniform chromosome in a highly variable genome
-
Berlin, S., and H. Ellegren. 2004. ChickenW: a genetically uniform chromosome in a highly variable genome. Proc Natl. Acad. Sci. U.S.A. 101:15967-15969.
-
(2004)
Proc Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 15967-15969
-
-
Berlin, S.1
Ellegren, H.2
-
6
-
-
28444481333
-
Amount of introgression in flycatcher hybrid zones reflects regional differences in pre and post-zygotic barriers to gene exchange
-
Borge, T., K. Lindroos, P. Nadvornik, A. C. Syvänen, and G. P. Sætre. 2005a. Amount of introgression in flycatcher hybrid zones reflects regional differences in pre and post-zygotic barriers to gene exchange. J. Evol. Biol. 18:1416-1424.
-
(2005)
J. Evol. Biol.
, vol.18
, pp. 1416-1424
-
-
Borge, T.1
Lindroos, K.2
Nadvornik, P.3
Syvänen, A.C.4
Sætre, G.P.5
-
7
-
-
33645118576
-
Contrasting patterns of polymorphism and divergence on the Z chromosome and autosomes in two Ficedula flycatcher species
-
Borge, T., M. T.Webster, G. Andersson, and G. P. Sætre. 2005b. Contrasting patterns of polymorphism and divergence on the Z chromosome and autosomes in two Ficedula flycatcher species. Genetics 171:1861-1873.
-
(2005)
Genetics
, vol.171
, pp. 1861-1873
-
-
Borge, T.1
Webster, M.T.2
Andersson, G.3
Sætre, G.P.4
-
8
-
-
77953908260
-
Historical divergence and gene flom: coalescent analyses of mitochondrial, autosomal and sex-linked loci in passerina buntings
-
Carling, M. D., I. J. Lovette, and R. T. Brumfield. 2010. Historical divergence and gene flom: coalescent analyses of mitochondrial, autosomal and sex-linked loci in passerina buntings. Evolution 64:1762-1772.
-
(2010)
Evolution
, vol.64
, pp. 1762-1772
-
-
Carling, M.D.1
Lovette, I.J.2
Brumfield, R.T.3
-
9
-
-
0023501735
-
The relative rates of evolution of sex chromosomes and autosomes
-
Charlesworth, B., J. A. Coyne, and N. H. Barton. 1987. The relative rates of evolution of sex chromosomes and autosomes. Am Nat. 130:113-135.
-
(1987)
Am Nat
, vol.130
, pp. 113-135
-
-
Charlesworth, B.1
Coyne, J.A.2
Barton, N.H.3
-
10
-
-
80052517347
-
Hybrid speciation in sparrows II: a role for sex chromosomes? Mol
-
Elgvin, T. O., J. S. Hermansen, A. Fijarczyk, T. Bonnet, T. Borge, S. A. Sæther, L. K. Voje, and G. P. Sætre. 2011. Hybrid speciation in sparrows II: a role for sex chromosomes? Mol. Ecol. 20:3823-3837.
-
(2011)
Ecol
, vol.20
, pp. 3823-3837
-
-
Elgvin, T.O.1
Hermansen, J.S.2
Fijarczyk, A.3
Bonnet, T.4
Borge, T.5
Sæther, S.A.6
Voje, L.K.7
Sætre, G.P.8
-
11
-
-
34547645438
-
Molecular evolutionary genomics of birds
-
Ellegren, H. 2007. Molecular evolutionary genomics of birds. Cytogenet. Genome Res. 117:120-130.
-
(2007)
Cytogenet. Genome Res.
, vol.117
, pp. 120-130
-
-
Ellegren, H.1
-
12
-
-
66449105907
-
The different levels of genetic diversity in sex chromosomes and autosomes
-
Ellegren, H. 2009. The different levels of genetic diversity in sex chromosomes and autosomes. Trends Genet. 25:278-284.
-
(2009)
Trends Genet
, vol.25
, pp. 278-284
-
-
Ellegren, H.1
-
13
-
-
85007110786
-
Arlequin (version 30): an integrated software package for population genetics data analysis
-
Excoffier, L., G. Laval, and S. Schneider. 2005. Arlequin (version 3.0): an integrated software package for population genetics data analysis. Evol. Bioinform. 1:47-50.
-
(2005)
Evol. Bioinform.
, vol.1
, pp. 47-50
-
-
Excoffier, L.1
Laval, G.2
Schneider, S.3
-
14
-
-
0033911640
-
Hitchhiking under positive Darwinian selection
-
Fay, J. C., and C.-I.Wu. 2000. Hitchhiking under positive Darwinian selection. Genetics 155:1405-1413.
-
(2000)
Genetics
, vol.155
, pp. 1405-1413
-
-
Fay, J.C.1
Wu, C.-I.2
-
15
-
-
0030436959
-
Relationship of genetic variation to population size in wildlife
-
Frankham, R. 1996. Relationship of genetic variation to population size in wildlife. Conserv. Biol. 10:1500-1508.
-
(1996)
Conserv. Biol.
, vol.10
, pp. 1500-1508
-
-
Frankham, R.1
-
16
-
-
0033852535
-
Discrepancies in population differentiation at microsatellites, mitochondrial DNA and plumage colour in the pied flycatcher - inferring evolutionary processes
-
Haavie, J., G. P. Sætre, and T. Moum. 2000. Discrepancies in population differentiation at microsatellites, mitochondrial DNA and plumage colour in the pied flycatcher - inferring evolutionary processes. Mol. Ecol. 9:1137-1148.
-
(2000)
Mol. Ecol.
, vol.9
, pp. 1137-1148
-
-
Haavie, J.1
Sætre, G.P.2
Moum, T.3
-
17
-
-
77955379360
-
Sex ratio and unisexual sterility in hybrid animals
-
Haldane, J. B. S. 1922. Sex ratio and unisexual sterility in hybrid animals. J. Genet. 12:101-109.
-
(1922)
J. Genet.
, vol.12
, pp. 101-109
-
-
Haldane, J.B.S.1
-
18
-
-
55149104619
-
Computation vs. cloning: evaluation of two methods for haplotype determination
-
Harrigan, R. J., M. E. Mazza, and M. D. Sorenson. 2008. Computation vs. cloning: evaluation of two methods for haplotype determination. Mol. Ecol. Res. 8:1239-1248.
-
(2008)
Mol. Ecol. Res.
, vol.8
, pp. 1239-1248
-
-
Harrigan, R.J.1
Mazza, M.E.2
Sorenson, M.D.3
-
19
-
-
33847253975
-
Integration within the Felsenstein equation for improved Markov chain Monte Carlo methods in population genetics
-
Hey, J., and R. Nielsen. 2007. Integration within the Felsenstein equation for improved Markov chain Monte Carlo methods in population genetics. Proc. Natl. Acad. Sci. U.S.A. 104:2785-2790.
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, pp. 2785-2790
-
-
Hey, J.1
Nielsen, R.2
-
20
-
-
0022211482
-
Statistical properties of the number of recombination events in the history of a sample of DNA-sequences
-
Hudson, R. R., and N. L. Kaplan. 1985. Statistical properties of the number of recombination events in the history of a sample of DNA-sequences. Genetics 111:147-164.
-
(1985)
Genetics
, vol.111
, pp. 147-164
-
-
Hudson, R.R.1
Kaplan, N.L.2
-
21
-
-
0023339852
-
A test of neutral molecular evolution based on nucleotide data
-
Hudson, R. R., M. Kreitman, and M. Aguade. 1987. A test of neutral molecular evolution based on nucleotide data. Genetics 116:153-159.
-
(1987)
Genetics
, vol.116
, pp. 153-159
-
-
Hudson, R.R.1
Kreitman, M.2
Aguade, M.3
-
22
-
-
0034575442
-
Methods to detect selection in populations with applications to the human
-
Kreitman, M. 2000. Methods to detect selection in populations with applications to the human. Annu. Rev. Genomics Hum. Genet. 1:539-559.
-
(2000)
Annu. Rev. Genomics Hum. Genet.
, vol.1
, pp. 539-559
-
-
Kreitman, M.1
-
23
-
-
65649117685
-
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
-
Librado, P., and J. Rozas. 2009. DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25:1451-1452.
-
(2009)
Bioinformatics
, vol.25
, pp. 1451-1452
-
-
Librado, P.1
Rozas, J.2
-
25
-
-
77249176571
-
Faster-Z evolution is predominantly due to genetic drift
-
Mank, J. E., K. Nam, and H. Ellegren. 2010. Faster-Z evolution is predominantly due to genetic drift. Mol. Biol. Evol. 27:661-670.
-
(2010)
Mol. Biol. Evol.
, vol.27
, pp. 661-670
-
-
Mank, J.E.1
Nam, K.2
Ellegren, H.3
-
26
-
-
0030726434
-
Patterns of DNA Variability at X-Linked Loci in Mus domesticus
-
Nachman, M.W. 1997. Patterns of DNA Variability at X-Linked Loci in Mus domesticus. Genetics 147:1303-1316.
-
(1997)
Genetics
, vol.147
, pp. 1303-1316
-
-
Nachman, M.W.1
-
27
-
-
0004275709
-
Molecular evolutionary genetics
-
Columbia Univ. Press, New York
-
Nei, M. 1987. Molecular evolutionary genetics. Columbia Univ. Press, New York.
-
(1987)
-
-
Nei, M.1
-
28
-
-
0034967295
-
Distinguishing migration from isolation: a Markov chain Monte Carlo approach
-
Nielsen, R., and J.Wakeley. 2001. Distinguishing migration from isolation: a Markov chain Monte Carlo approach. Genetics 158:885-896.
-
(2001)
Genetics
, vol.158
, pp. 885-896
-
-
Nielsen, R.1
Wakeley, J.2
-
30
-
-
45449104603
-
Sex chromosomes and speciation in Drosophila
-
Presgraves, D. C. 2008. Sex chromosomes and speciation in Drosophila. Trends Genet. 24:336-343.
-
(2008)
Trends Genet
, vol.24
, pp. 336-343
-
-
Presgraves, D.C.1
-
31
-
-
0036006238
-
Single-nucleotide polymorphism characterization in species with limited available sequence information: high nucleotide diversity revealed in the avian genome
-
Primmer, C. R., T. Borge, J. Lindell, and G. P. Sætre. 2002. Single-nucleotide polymorphism characterization in species with limited available sequence information: high nucleotide diversity revealed in the avian genome. Mol. Ecol. 11:603-612.
-
(2002)
Mol. Ecol.
, vol.11
, pp. 603-612
-
-
Primmer, C.R.1
Borge, T.2
Lindell, J.3
Sætre, G.P.4
-
32
-
-
57749192046
-
Speciation through evolution of sex-linked genes
-
Qvarnström, A., and R. I. Bailey. 2009. Speciation through evolution of sex-linked genes. Heredity 102:4-15.
-
(2009)
Heredity
, vol.102
, pp. 4-15
-
-
Qvarnström, A.1
Bailey, R.I.2
-
33
-
-
0037281072
-
Male ornamentation, timing of breeding, and cost of polygyny in the collared flycatcher
-
Qvarnström, A., B. C. Sheldon, T. Pärt, and L. Gustafsson. 2003. Male ornamentation, timing of breeding, and cost of polygyny in the collared flycatcher. Behav. Ecol. 14:68-73.
-
(2003)
Behav. Ecol.
, vol.14
, pp. 68-73
-
-
Qvarnström, A.1
Sheldon, B.C.2
Pärt, T.3
Gustafsson, L.4
-
35
-
-
0037213556
-
Hitchhiking mapping - functional genomics from the population genetics perspective
-
Schlötterer, C. 2003. Hitchhiking mapping - functional genomics from the population genetics perspective. Trends Genet. 19:32-38.
-
(2003)
Trends Genet
, vol.19
, pp. 32-38
-
-
Schlötterer, C.1
-
36
-
-
0001881618
-
Preservation of avian blood and tissue samples for DNA analyses
-
Seutin, G., B. N.White, and P. T. Boag. 1991. Preservation of avian blood and tissue samples for DNA analyses. Can. J. Zool. 69:82-90.
-
(1991)
Can. J. Zool.
, vol.69
, pp. 82-90
-
-
Seutin, G.1
White, B.N.2
Boag, P.T.3
-
37
-
-
0242691208
-
A comparison of Bayesian methods for haplotype reconstruction from population genotype data
-
Stephens, M., and P. Donnelly. 2003. A comparison of Bayesian methods for haplotype reconstruction from population genotype data. Am. J. Hum. Genet. 73:1162-1169.
-
(2003)
Am. J. Hum. Genet.
, vol.73
, pp. 1162-1169
-
-
Stephens, M.1
Donnelly, P.2
-
38
-
-
75149153490
-
Female heterogamety and speciation: reduced introgression of the Z chromosome between two species of nightingales
-
Storchova, R., J. Reif, and M.W. Nachman. 2010. Female heterogamety and speciation: reduced introgression of the Z chromosome between two species of nightingales. Evolution 64:456-471.
-
(2010)
Evolution
, vol.64
, pp. 456-471
-
-
Storchova, R.1
Reif, J.2
Nachman, M.W.3
-
39
-
-
35148885655
-
Sex chromosome-linked species recognition and evolution of reproductive isolation in flycatchers
-
Sæther, S. A., G. P. Sætre, T. Borge, C.Wiley, N. Svedin, G. Andersson, T. Veen, J. Haavie, M. R. Servedio, and S. Bures, et al. 2007. Sex chromosome-linked species recognition and evolution of reproductive isolation in flycatchers. Science 318:95-97
-
(2007)
Science
, vol.318
, pp. 95-97
-
-
Sæther, S.A.1
Sætre, G.P.2
Borge, T.3
Wiley, C.4
Svedin, N.5
Andersson, G.6
Veen, T.7
Haavie, J.8
Servedio, M.R.9
Bures, S.10
-
40
-
-
77950253423
-
Ecology and genetics of speciation in Ficedula flycatchers
-
Sætre, G. P., and S. A. Sæther. 2010. Ecology and genetics of speciation in Ficedula flycatchers. Mol. Ecol. 19:1091-1106.
-
(2010)
Mol. Ecol.
, vol.19
, pp. 1091-1106
-
-
Sætre, G.P.1
Sæther, S.A.2
-
41
-
-
0035025302
-
Speciation, introgressive hybridization and nonlinear rate of molecular evolution in flycatchers
-
Sætre,G. P., T. Borge, J. Lindell, T. Moum, C. R. Primmer, B. C. Sheldon, J. Haavie, A. Johnsen, and H. Ellegren. 2001. Speciation, introgressive hybridization and nonlinear rate of molecular evolution in flycatchers. Mol. Ecol. 10:737-749.
-
(2001)
Mol. Ecol.
, vol.10
, pp. 737-749
-
-
Sætre, G.P.1
Borge, T.2
Lindell, J.3
Moum, T.4
Primmer, C.R.5
Sheldon, B.C.6
Haavie, J.7
Johnsen, A.8
Ellegren, H.9
-
42
-
-
0038660998
-
Sex chromosome evolution and speciation in Ficedula flycatchers
-
Sætre,G. P., T. Borge, K. Lindroos, J.Haavie, B. C. Sheldon, C. Primmer and A. C. Syvanen. 2003. Sex chromosome evolution and speciation in Ficedula flycatchers. Proc. R. Soc. Lond. Ser. B 270:53-59.
-
(2003)
Proc. R. Soc. Lond. Ser. B
, vol.270
, pp. 53-59
-
-
Sætre, G.P.1
Borge, T.2
Lindroos, K.3
Haavie, J.4
Sheldon, B.C.5
Primmer, C.6
Syvanen, A.C.7
-
43
-
-
0024313579
-
Statistical-method for testing the neutral mutation hypothesis by DNA polymorphism
-
Tajima, F. 1989. Statistical-method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123:585-595.
-
(1989)
Genetics
, vol.123
, pp. 585-595
-
-
Tajima, F.1
-
44
-
-
34547781750
-
MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4 0
-
Tamura, K., J. Dudley, M. Nei, and S. Kumar. 2007. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24:1596-1599.
-
(2007)
Mol. Biol. Evol.
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
45
-
-
0028956275
-
The dominance theory of Haldanes rule
-
Turelli, M., and H. A. Orr. 1995. The dominance theory of Haldanes rule. Genetics 140:389-402.
-
(1995)
Genetics
, vol.140
, pp. 389-402
-
-
Turelli, M.1
Orr, H.A.2
-
46
-
-
0003243515
-
Gene flow and natural selection in the origin of Drosophila pseudoobscura and close relatives
-
Wang, R. L., J.Wakeley, and J. Hey. 1997. Gene flow and natural selection in the origin of Drosophila pseudoobscura and close relatives. Genetics 147:1091-1106.
-
(1997)
Genetics
, vol.147
, pp. 1091-1106
-
-
Wang, R.L.1
Wakeley, J.2
Hey, J.3
-
47
-
-
0016491430
-
On the number of segregating sites in genetical models without recombination
-
Watterson, G. A. 1975. On the number of segregating sites in genetical models without recombination. Theor. Popul. Biol. 7:256-276.
-
(1975)
Theor. Popul. Biol.
, vol.7
, pp. 256-276
-
-
Watterson, G.A.1
-
48
-
-
0021566877
-
Estimating f-statistics for the analysis of population-structure
-
Weir, B. S., and C. C. Cockerham. 1984. Estimating f-statistics for the analysis of population-structure. Evolution 38:1358- 1370.
-
(1984)
Evolution
, vol.38
, pp. 1358-1370
-
-
Weir, B.S.1
Cockerham, C.C.2
-
49
-
-
67649445924
-
Postzygotic isolation over multiple generations of hybrid descendents in a natural hybrid zone: how well do single-generation estimates reflect reproductive isolation?
-
Wiley, C., A. Qvarnström, G. Andersson, T. Borge, and G.-P Sætre. 2009. Postzygotic isolation over multiple generations of hybrid descendents in a natural hybrid zone: how well do single-generation estimates reflect reproductive isolation? Evolution 63:1731-1739.
-
(2009)
Evolution
, vol.63
, pp. 1731-1739
-
-
Wiley, C.1
Qvarnström, A.2
Andersson, G.3
Borge, T.4
Sætre, G.-P.5
|