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Volumn 8, Issue 1, 2013, Pages

Systematic Functional Comparative Analysis of Four Single-Stranded DNA-Binding Proteins and Their Affection on Viral RNA Metabolism

Author keywords

[No Author keywords available]

Indexed keywords

DNA POLYMERASE; SINGLE STRANDED DNA BINDING PROTEIN; VIRUS RNA;

EID: 84872869478     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0055076     Document Type: Article
Times cited : (13)

References (26)
  • 1
    • 0003884063 scopus 로고    scopus 로고
    • New York: John Wiley & Sons Inc
    • Brown T (1999) Genomes. New York: John Wiley & Sons Inc.
    • (1999) Genomes
    • Brown, T.1
  • 2
    • 27644457202 scopus 로고    scopus 로고
    • Single-stranded DNA-binding proteins (SSBs) - sources and applications in molecular biology
    • Review
    • Kur J, Olszewski M, Długołecka A, Filipkowski P (2005) Single-stranded DNA-binding proteins (SSBs) - sources and applications in molecular biology. Acta Biochim Pol 52: 569-574, Review.
    • (2005) Acta Biochim Pol , vol.52 , pp. 569-574
    • Kur, J.1    Olszewski, M.2    Długołecka, A.3    Filipkowski, P.4
  • 4
    • 80054954986 scopus 로고    scopus 로고
    • Structure of the SSB-DNA polymerase III interface and its role in DNA replication
    • Marceau AH, Bahng S, Massoni SC, George NP, Sandler SJ, et al. (2011) Structure of the SSB-DNA polymerase III interface and its role in DNA replication. EMBO J 30: 4236-4247.
    • (2011) EMBO J , vol.30 , pp. 4236-4247
    • Marceau, A.H.1    Bahng, S.2    Massoni, S.C.3    George, N.P.4    Sandler, S.J.5
  • 5
    • 44449118949 scopus 로고    scopus 로고
    • Single-stranded DNA-binding protein hSSB1 is critical for genomic stability
    • Richard DJ, Bolderson E, Cubeddu L, Wadsworth RI, Savage K, et al. (2008) Single-stranded DNA-binding protein hSSB1 is critical for genomic stability. Nature 453: 677-681.
    • (2008) Nature , vol.453 , pp. 677-681
    • Richard, D.J.1    Bolderson, E.2    Cubeddu, L.3    Wadsworth, R.I.4    Savage, K.5
  • 6
    • 0028246888 scopus 로고
    • Escherichia coli single-stranded DNA-binding protein: multiple DNA-binding modes and cooperativities
    • Review
    • Lohman TM, Ferrari ME (1994) Escherichia coli single-stranded DNA-binding protein: multiple DNA-binding modes and cooperativities. Annu Rev Biochem 63: 527-570, Review.
    • (1994) Annu Rev Biochem , vol.63 , pp. 527-570
    • Lohman, T.M.1    Ferrari, M.E.2
  • 7
    • 33845874427 scopus 로고    scopus 로고
    • 3D structure of Thermus aquaticus single-stranded DNA-binding protein gives insight into the functioning of SSB proteins
    • Fedorov R, Witte G, Urbanke C, Manstein DJ, Curth U, (2006) 3D structure of Thermus aquaticus single-stranded DNA-binding protein gives insight into the functioning of SSB proteins. Nucleic Acids Res 34: 6708-6717.
    • (2006) Nucleic Acids Res , vol.34 , pp. 6708-6717
    • Fedorov, R.1    Witte, G.2    Urbanke, C.3    Manstein, D.J.4    Curth, U.5
  • 9
    • 0344237378 scopus 로고    scopus 로고
    • Enhancement of DNA, cDNA synthesis and fidelity at high temperatures by a dimeric single-stranded DNA-binding protein
    • Perales C, Cava F, Meijer WJ, Berenguer J, (2003) Enhancement of DNA, cDNA synthesis and fidelity at high temperatures by a dimeric single-stranded DNA-binding protein. Nucleic Acids Res 31: 6473-6480.
    • (2003) Nucleic Acids Res , vol.31 , pp. 6473-6480
    • Perales, C.1    Cava, F.2    Meijer, W.J.3    Berenguer, J.4
  • 10
    • 15944410321 scopus 로고    scopus 로고
    • Application of SSB-like protein from Thermus aquaticus in multiplex PCR of human Y-STR markers identification
    • Olszewski M, Rebała K, Szczerkowska Z, Kur J, (2005) Application of SSB-like protein from Thermus aquaticus in multiplex PCR of human Y-STR markers identification. Mol Cell Probes 19: 203-205.
    • (2005) Mol Cell Probes , vol.19 , pp. 203-205
    • Olszewski, M.1    Rebała, K.2    Szczerkowska, Z.3    Kur, J.4
  • 11
    • 0024599353 scopus 로고
    • Oligonucleotide-directed restriction endonuclease digestion
    • Milavetz B, (1989) Oligonucleotide-directed restriction endonuclease digestion. Nucleic Acids Res 17: 3322.
    • (1989) Nucleic Acids Res , vol.17 , pp. 3322
    • Milavetz, B.1
  • 12
    • 77956910754 scopus 로고
    • Single-stranded DNA binding proteins
    • In: Boyer P, editor, New York: Academic Press
    • Kowalczykowski SC, Bear DG, von Hippel PH (1981) Single-stranded DNA binding proteins. In: Boyer P, editor. The Enzymes. New York: Academic Press. 373-444.
    • (1981) The Enzymes , pp. 373-444
    • Kowalczykowski, S.C.1    Bear, D.G.2    von Hippel, P.H.3
  • 13
    • 2342516683 scopus 로고    scopus 로고
    • Physical and functional interaction of the archaeal single-stranded DNA-binding protein SSB with RNA polymerase
    • Richard DJ, Bell SD, White MF, (2004) Physical and functional interaction of the archaeal single-stranded DNA-binding protein SSB with RNA polymerase. Nucleic Acids Res 32: 1065-1074.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1065-1074
    • Richard, D.J.1    Bell, S.D.2    White, M.F.3
  • 14
    • 0033536472 scopus 로고    scopus 로고
    • A multistep chemical modification procedure to create DNA arrays on gold surfaces for the study of protein-DNA interactions with surface plasmon resonance imaging
    • Brockman JM, Frutos AG, Corn RM, (1999) A multistep chemical modification procedure to create DNA arrays on gold surfaces for the study of protein-DNA interactions with surface plasmon resonance imaging. J Am Chem Soc 121: 8044-8051.
    • (1999) J Am Chem Soc , vol.121 , pp. 8044-8051
    • Brockman, J.M.1    Frutos, A.G.2    Corn, R.M.3
  • 15
    • 0032925262 scopus 로고    scopus 로고
    • Application of denaturant gradient gel electrophoresis for the analysis of the porcine gastrointestinal microbiota
    • Simpson JM, McCracken VJ, White BA, Gaskins HR, Mackie RI, (1999) Application of denaturant gradient gel electrophoresis for the analysis of the porcine gastrointestinal microbiota. J Microbiol Methods 36: 167-179.
    • (1999) J Microbiol Methods , vol.36 , pp. 167-179
    • Simpson, J.M.1    McCracken, V.J.2    White, B.A.3    Gaskins, H.R.4    Mackie, R.I.5
  • 16
    • 34147224324 scopus 로고
    • The single-stranded DNA-binding protein of Escherichia coli
    • Review
    • Meyer RR, Laine PS (1990) The single-stranded DNA-binding protein of Escherichia coli. Microbiol Rev 54: 342-380, Review.
    • (1990) Microbiol Rev , vol.54 , pp. 342-380
    • Meyer, R.R.1    Laine, P.S.2
  • 17
    • 84872309439 scopus 로고    scopus 로고
    • Single-stranded DNA-binding Proteins
    • New York: Macmillan Publishers Ltd
    • Shamoo Y (2002) Single-stranded DNA-binding Proteins. In: Encyclopedia of Life Sciences. New York: Macmillan Publishers Ltd. 1-7.
    • (2002) Encyclopedia of Life Sciences , pp. 1-7
    • Shamoo, Y.1
  • 18
    • 22544470874 scopus 로고    scopus 로고
    • Production of infectious hepatitis C virus in tissue culture from a cloned viral genome
    • Wakita T, Pietschmann T, Kato T, Date T, Miyamoto M, et al. (2005) Production of infectious hepatitis C virus in tissue culture from a cloned viral genome. Nat Med 11: 791-796.
    • (2005) Nat Med , vol.11 , pp. 791-796
    • Wakita, T.1    Pietschmann, T.2    Kato, T.3    Date, T.4    Miyamoto, M.5
  • 21
    • 0041923779 scopus 로고    scopus 로고
    • Escherichia coli single-stranded DNA-binding protein mediates template recycling during transcription by bacteriophage N4 virion RNA polymerase
    • Davydova EK, Rothman-Denes LB, (2003) Escherichia coli single-stranded DNA-binding protein mediates template recycling during transcription by bacteriophage N4 virion RNA polymerase. Proc Natl Acad Sci U S A 100: 9250-9255.
    • (2003) Proc Natl Acad Sci U S A , vol.100 , pp. 9250-9255
    • Davydova, E.K.1    Rothman-Denes, L.B.2
  • 22
    • 77952783935 scopus 로고    scopus 로고
    • Regulation of single-stranded DNA binding by the C termini of Escherichia coli single-stranded DNA-binding (SSB) protein
    • Kozlov AG, Cox MM, Lohman TM, (2010) Regulation of single-stranded DNA binding by the C termini of Escherichia coli single-stranded DNA-binding (SSB) protein. J Biol Chem 285: 17246-17252.
    • (2010) J Biol Chem , vol.285 , pp. 17246-17252
    • Kozlov, A.G.1    Cox, M.M.2    Lohman, T.M.3
  • 23
    • 0035902560 scopus 로고    scopus 로고
    • Roles of DNA polymerases V and II in SOS-induced error-prone and error-free repair in Escherichia coli
    • Review
    • Pham P, Rangarajan S, Woodgate R, Goodman MF (2001) Roles of DNA polymerases V and II in SOS-induced error-prone and error-free repair in Escherichia coli. Proc Natl Acad Sci U S A 98: 8350-8354, Review.
    • (2001) Proc Natl Acad Sci U S A , vol.98 , pp. 8350-8354
    • Pham, P.1    Rangarajan, S.2    Woodgate, R.3    Goodman, M.F.4
  • 24
    • 0027946790 scopus 로고
    • Purification and characterization of a thermostable thiol protease from a newly isolated hyperthermophilic Pyrococcus sp
    • Morikawa M, Izawa Y, Rashid N, Hoaki T, Imanaka T, (1994) Purification and characterization of a thermostable thiol protease from a newly isolated hyperthermophilic Pyrococcus sp. Applied and Environmental Microbiology 60: 4559-4566.
    • (1994) Applied and Environmental Microbiology , vol.60 , pp. 4559-4566
    • Morikawa, M.1    Izawa, Y.2    Rashid, N.3    Hoaki, T.4    Imanaka, T.5
  • 25
    • 0030666190 scopus 로고    scopus 로고
    • Characterization of DNA polymerase from Pyrococcus sp. strain KOD1 and its application to PCR
    • Takagi M, Nishioka M, Kakihara H, Kitabayashi M, Inoue H, et al. (1997) Characterization of DNA polymerase from Pyrococcus sp. strain KOD1 and its application to PCR. Appl Environ Microbiol 63: 4504-4510.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 4504-4510
    • Takagi, M.1    Nishioka, M.2    Kakihara, H.3    Kitabayashi, M.4    Inoue, H.5
  • 26
    • 38049029649 scopus 로고    scopus 로고
    • Single strand binding proteins increase the processivity of DNA unwinding by the hepatitis C virus helicase
    • Rajagopal V, Patel S, (2008) Single strand binding proteins increase the processivity of DNA unwinding by the hepatitis C virus helicase. J Mol Biol 376: 69-79.
    • (2008) J Mol Biol , vol.376 , pp. 69-79
    • Rajagopal, V.1    Patel, S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.