RNA helicase is involved in the expression and replication of classical swine fever virus and interacts with untranslated region

Virus Research

Volumn 171, Issue 1, 2013, Pages 257-261

  Sheng, Chun ^a   Yao, Yuting ^a   Chen, Bing ^a   Wang, Yujing ^a   Chen, Jun ^a   Xiao, Ming ^a  

^a SHANGHAI NORMAL UNIVERSITY   (China)

Author keywords

3' UTR; 5' UTR; Classical swine fever virus; Replication; RNAi

Indexed keywords

NONSTRUCTURAL PROTEIN 3; RNA HELICASE; SMALL INTERFERING RNA;

3' UNTRANSLATED REGION; 5' UNTRANSLATED REGION; AFFINITY CHROMATOGRAPHY; ARTICLE; BINDING AFFINITY; CLASSICAL SWINE FEVER; CONTROLLED STUDY; CROSS LINKING; CYTOPLASM; GENE EXPRESSION; GENETIC TRANSFECTION; MODULATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PESTIVIRUS; PRIORITY JOURNAL; REPLICON; RNA SYNTHESIS; ULTRAVIOLET RADIATION; UNTRANSLATED REGION; VIRUS REPLICATION; VIRUS TRANSCRIPTION;

ANIMALS; BASE SEQUENCE; BINDING SITES; CELL LINE; CLASSICAL SWINE FEVER VIRUS; GENE EXPRESSION REGULATION, VIRAL; GENE SILENCING; NUCLEIC ACID CONFORMATION; RNA HELICASES; RNA INTERFERENCE; RNA, VIRAL; UNTRANSLATED REGIONS; VIRUS REPLICATION;

CLASSICAL SWINE FEVER VIRUS;

EID: 84872796309     PISSN: 01681702     EISSN: 18727492     Source Type: Journal    
DOI: 10.1016/j.virusres.2012.11.014     Document Type: Article

References (23)

1. Baird S.D., Turcotte M., Korneluk R.G., Holcik M. Searching for IRES. RNA 2006, 12:1755-1785.
2. Becher P., Thiel H.-J. Genus Pestivirus (Flaviviridae). The Springer Index of Viruses 2002, 327-331. Springer-Verlag, Heidelberg, Germany. C.A. Tidona, G. Darai (Eds.).
3. Bolinger C., Sharma A., Singh D., Yu L., Boris-Lawrie K. RNA helicase A modulates translation of HIV-1 and infectivity of progeny virions. Nucleic Acids Research 2010, 38:1686-1696.
4. Chen Y., Xiao J., Xiao J., Sheng C., Wang J., Jia L., Zhi Y., Li G., Chen J., Xiao M. Classical swine fever virus NS5A regulates viral RNA replication through binding to NS5B and 3'UTR. Virology 2012, 432:376-388.
5. Cuthbert J.A. Hepatitis C: progress and problems. Clinical Microbiology Reviews 1994, 7:505-532.
6. Fletcher S.P., Jackson R.J. Pestivirus internal ribosome entry site (IRES) structure and function: elements in the 5' untranslated region important for IRES function. Journal of Virology 2002, 76:5024-5033.
7. Isken O., Grassmann C.W., Sarisky R.T., Kann M., Zhang S., Grosse F., Kao P.N., Behrens S.E. Members of the NF90/NFAR protein group are involved in the life cycle of a positive-strand RNA virus. EMBO Journal 2003, 22:5655-5665.
8. Isken O., Baroth M., Grassmann C.W., Weinlich S., Ostareck D.H., Ostareck-Lederer A., Behrens S.E. Nuclear factors are involved in hepatitis C virus RNA replication. RNA 2007, 13:1675-1692.
9. Lin L., Li Y., Pyo H.M., Lu X., Thulasi Raman S.N., Liu Q., Brown E.G., Zhou.Y. Identification of RNA helicase A as a cellular factor that interacts with influenza A virus NS1 protein and its role in the virus life cycle. Journal of Virology 2012, 86:1942-1954.
10. Moennig V., Plagemann P.G.W. The pestiviruses. Advances in Virus Research 1992, 41:53-98.
11. Roy B.B., Hu J., Guo X., Russell R.S., Guo F., Kleiman L., Liang C. Association of RNA helicase a with human immunodeficiency virus type 1 particles. Journal of Biological Chemistry 2006, 281:12625-12635.
12. Sheng C., Chen Y., Xiao J., Wang J., Li G., Chen J., Xiao M. Classical swine fever virus NS5A protein interacts with 3'-untranslated region and regulates viral RNA synthesis. Virus Research 2012, 163:636-643.
13. Sheng C., Xiao M., Geng X., Liu J., Wang Y., Gu F. Characterization of interaction of classical swine fever virus NS3 helicase with 3' untranslated region. Virus Research 2007, 129:43-53.
14. Sheng C., Zhua Z., Yua J., Wan L., Wang Y., Chen J., Gu F., Xiao M. Characterization of NS3, NS5A and NS5B of classical swine fever virus through mutation and complementation analysis. Veterinary Microbiology 2010, 140:72-80.
15. Wang Y., Zhu Z., Wang P., Yu J., Wan L., Chen J., Xiao M. Characterisation of interaction between NS3 and NS5B protein of classical swine fever virus by deletion of terminal sequences of NS5B. Virus Research 2011, 156:98-106.
16. Xiao M., Gao J., Wang W., Wang Y., Chen J., Chen J., Li B. Specific interaction between the classical swine fever virus NS5B protein and the viral genome. European Journal of Biochemistry 2004, 271:3888-3896.
17. Xiao M., Wang Y., Chen J., Li B. Characterization of RNA-dependent RNA polymerase activity of CSFV NS5B proteins expressed in Escherichia coli. Virus Genes 2003, 7:67-74.
18. Xiao M., Wang Y., Zhu Z., Zhao W., Ding C., Yu J., Chen J. Influence of the 5'-proximal elements of the 5'-untranslated region of classical swine fever virus on translation and replication. Journal of General of Virology 2011, 92:1087-1096.
19. Xiao M., Zhi Z.Z., Zhang C.Y. Qualitative, quantitative and structural analysis of non-coding regions of classical swine fever virus genome. Chinese Science Bulletin 2001, 46:1251-1257.
20. Yu H., Grassmann C.W., Behrens S.E. Sequence and structural elements at the 3' terminus of bovine viral diarrhea virus genomic RNA: functional role during RNA replication. Journal of Virology 1999, 73:3638-3648.
21. Yu H., Isken O., Grassmann C.W., Behrens S.-E. A stem-loop motif formed by the immediate 5'-terminus of the bovine viral diarrhea virus genome modulates translation as well as replication of the viral RNA. Journal of Virology 2000, 74:5825-5835.
22. Zhang S., Grosse F. Domain structure of human nuclear DNA helicase II (RNA helicase A). Journal of Biological Chemistry 1997, 272:11487-11494.
23. Zhu Z., Wang Y., Yu J., Wan L., Chen J., Xiao M. Classical swine fever virus NS3 is an IRES-binding protein. Virus Research 2010, 153:106-112.