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Volumn 36, Issue 1, 2013, Pages 66-75

Small RNA transcriptomes of two types of exosomes in human whole saliva determined by next generation sequencing

Author keywords

Exosome; Human whole saliva; Next generation sequencing; Transcriptome

Indexed keywords

MICRORNA; PIWI INTERACTING RNA; PROTEOME; SMALL NUCLEAR RNA; SMALL UNTRANSLATED RNA; TRANSCRIPTOME;

EID: 84872712527     PISSN: 09186158     EISSN: 13475215     Source Type: Journal    
DOI: 10.1248/bpb.b12-00607     Document Type: Article
Times cited : (119)

References (48)
  • 1
    • 17844368916 scopus 로고    scopus 로고
    • Large-scale identification of proteins in human salivary proteome by liquid chromatography/mass spectrometry and two-dimensional gel electrophoresis-mass spectrometry
    • Hu S, Xie Y, Ramachandran P, Ogorzalek Loo RR, Li Y, Loo JA, Wong DT. Large-scale identification of proteins in human salivary proteome by liquid chromatography/mass spectrometry and two-dimensional gel electrophoresis-mass spectrometry. Proteomics, 5, 1714-1728 (2005).
    • (2005) Proteomics , vol.5 , pp. 1714-1728
    • Hu, S.1    Xie, Y.2    Ramachandran, P.3    Ogorzalek Loo, R.R.4    Li, Y.5    Loo, J.A.6    Wong, D.T.7
  • 2
    • 1642602624 scopus 로고    scopus 로고
    • RNA profiling of cell-free saliva using microarray technology
    • Li Y, Zhou X, St John MA, Wong DT. RNA profiling of cell-free saliva using microarray technology. J. Dent. Res., 83, 199-203 (2004).
    • (2004) J. Dent. Res. , vol.83 , pp. 199-203
    • Li, Y.1    Zhou, X.2    St John, M.A.3    Wong, D.T.4
  • 7
    • 33751199883 scopus 로고    scopus 로고
    • Exosomes: From biogenesis and secretion to biological function
    • Keller S, Sanderson MP, Stoeck A, Altevogt P. Exosomes: from biogenesis and secretion to biological function. Immunol. Lett., 107, 102-108 (2006).
    • (2006) Immunol. Lett. , vol.107 , pp. 102-108
    • Keller, S.1    Sanderson, M.P.2    Stoeck, A.3    Altevogt, P.4
  • 8
    • 33645314949 scopus 로고    scopus 로고
    • Exosomes biological significance: A concise review
    • Johnstone RM. Exosomes biological significance: A concise review. Blood Cells Mol. Dis., 36, 315-321 (2006).
    • (2006) Blood Cells Mol. Dis. , vol.36 , pp. 315-321
    • Johnstone, R.M.1
  • 9
    • 0022201056 scopus 로고
    • Electron microscopic evidence for externalization of the transferrin receptor in vesicular form in sheep reticulocytes
    • Pan BT, Teng K, Wu C, Adam M, Johnstone RM. Electron microscopic evidence for externalization of the transferrin receptor in vesicular form in sheep reticulocytes. J. Cell Biol., 101, 942-948 (1985).
    • (1985) J. Cell Biol. , vol.101 , pp. 942-948
    • Pan, B.T.1    Teng, K.2    Wu, C.3    Adam, M.4    Johnstone, R.M.5
  • 12
    • 0035877018 scopus 로고    scopus 로고
    • Proteomic analysis of dendritic cell-derived exosomes: A secreted subcellular compartment distinct from apoptotic vesicles
    • Théry C, Boussac M, Véron P, Ricciardi-Castagnoli P, Raposo G, Garin J, Amigorena S. Proteomic analysis of dendritic cell-derived exosomes: a secreted subcellular compartment distinct from apoptotic vesicles. J. Immunol., 166, 7309-7318 (2001).
    • (2001) J. Immunol. , vol.166 , pp. 7309-7318
    • Théry, C.1    Boussac, M.2    Véron, P.3    Ricciardi-Castagnoli, P.4    Raposo, G.5    Garin, J.6    Amigorena, S.7
  • 15
    • 4444226979 scopus 로고    scopus 로고
    • Identification and proteomic profiling of exosomes in human urine
    • Pisitkun T, Shen RF, Knepper MA. Identification and proteomic profiling of exosomes in human urine. Proc. Natl. Acad. Sci. U.S.A., 101, 13368-13373 (2004).
    • (2004) Proc. Natl. Acad. Sci. U.S.A. , vol.101 , pp. 13368-13373
    • Pisitkun, T.1    Shen, R.F.2    Knepper, M.A.3
  • 18
    • 34249302620 scopus 로고    scopus 로고
    • Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells
    • Valadi H, Ekström K, Bossios A, Sjöstrand M, Lee JJ, Lötvall JO. Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells. Nat. Cell Biol., 9, 654-659 (2007).
    • (2007) Nat. Cell Biol. , vol.9 , pp. 654-659
    • Valadi, H.1    Ekström, K.2    Bossios, A.3    Sjöstrand, M.4    Lee, J.J.5    Lötvall, J.O.6
  • 19
    • 1642374097 scopus 로고    scopus 로고
    • Specificity of microRNA target selection in translational repression
    • Doench JG, Sharp PA. Specificity of microRNA target selection in translational repression. Genes Dev., 18, 504-511 (2004).
    • (2004) Genes Dev. , vol.18 , pp. 504-511
    • Doench, J.G.1    Sharp, P.A.2
  • 20
    • 60149088848 scopus 로고    scopus 로고
    • Origins and Mechanisms of miRNAs and siRNAs
    • Carthew RW, Sontheimer EJ. Origins and Mechanisms of miRNAs and siRNAs. Cell, 136, 642-655 (2009).
    • (2009) Cell , vol.136 , pp. 642-655
    • Carthew, R.W.1    Sontheimer, E.J.2
  • 21
    • 4644223259 scopus 로고    scopus 로고
    • Mechanisms of gene silencing by double-stranded RNA
    • London
    • Meister G, Tuschl T. Mechanisms of gene silencing by double-stranded RNA. Nature, 431, 343-349 (2004), London.
    • (2004) Nature , vol.431 , pp. 343-349
    • Meister, G.1    Tuschl, T.2
  • 22
    • 0033572284 scopus 로고    scopus 로고
    • The lin-4 regulatory RNA controls developmental timing in Caenorhabditis elegans by blocking LIN-14 protein synthesis after the initiation of translation
    • Olsen PH, Ambros V. The lin-4 regulatory RNA controls developmental timing in Caenorhabditis elegans by blocking LIN-14 protein synthesis after the initiation of translation. Dev. Biol., 216, 671-680 (1999).
    • (1999) Dev. Biol. , vol.216 , pp. 671-680
    • Olsen, P.H.1    Ambros, V.2
  • 23
    • 38349169664 scopus 로고    scopus 로고
    • Mechanisms of post-transcriptional regulation by microRNAs: Are the answers in sight?
    • Filipowicz W, Bhattacharyya SN, Sonenberg N. Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight? Nat. Rev. Genet., 9, 102-114 (2008).
    • (2008) Nat. Rev. Genet. , vol.9 , pp. 102-114
    • Filipowicz, W.1    Bhattacharyya, S.N.2    Sonenberg, N.3
  • 25
    • 61849181477 scopus 로고    scopus 로고
    • Identification of forensically relevant body fluids using a panel of differentially expressed microRNAs
    • Hanson EK, Lubenow H, Ballantyne J. Identification of forensically relevant body fluids using a panel of differentially expressed microRNAs. Anal. Biochem., 387, 303-314 (2009).
    • (2009) Anal. Biochem. , vol.387 , pp. 303-314
    • Hanson, E.K.1    Lubenow, H.2    Ballantyne, J.3
  • 26
    • 77954563216 scopus 로고    scopus 로고
    • MicroRNA markers for forensic body fluid identification obtained from microarray screening and quantitative RT-PCR confirmation
    • Zubakov D, Boersma AW, Choi Y, van Kuijk PF, Wiemer EA, Kayser M. MicroRNA markers for forensic body fluid identification obtained from microarray screening and quantitative RT-PCR confirmation. Int. J. Legal Med., 124, 217-226 (2010).
    • (2010) Int. J. Legal Med. , vol.124 , pp. 217-226
    • Zubakov, D.1    Boersma, A.W.2    Choi, Y.3    Van Kuijk, P.F.4    Wiemer, E.A.5    Kayser, M.6
  • 27
    • 80055116881 scopus 로고    scopus 로고
    • Specific micro-RNA signatures for the detection of saliva and blood in forensic body-fluid identification
    • Courts C, Madea B. Specific micro-RNA signatures for the detection of saliva and blood in forensic body-fluid identification. J. Forensic Sci., 56, 1464-1470 (2011).
    • (2011) J. Forensic Sci. , vol.56 , pp. 1464-1470
    • Courts, C.1    Madea, B.2
  • 28
    • 53749083993 scopus 로고    scopus 로고
    • SeqMap: Mapping massive amount of oligonucleotides to the genome
    • Jiang H, Wong WH. SeqMap: mapping massive amount of oligonucleotides to the genome. Bioinformatics, 24, 2395-2396 (2008).
    • (2008) Bioinformatics , vol.24 , pp. 2395-2396
    • Jiang, H.1    Wong, W.H.2
  • 31
    • 38049103266 scopus 로고    scopus 로고
    • MicroRNA-378 promotes cell survival, tumor growth, and angiogenesis by targeting SuFu and Fus-1 expression
    • Lee DY, Deng Z, Wang CH, Yang BB. MicroRNA-378 promotes cell survival, tumor growth, and angiogenesis by targeting SuFu and Fus-1 expression. Proc. Natl. Acad. Sci. U.S.A., 104, 20350-20355 (2007).
    • (2007) Proc. Natl. Acad. Sci. U.S.A. , vol.104 , pp. 20350-20355
    • Lee, D.Y.1    Deng, Z.2    Wang, C.H.3    Yang, B.B.4
  • 34
    • 34247565615 scopus 로고    scopus 로고
    • The tumor suppressor microRNA let-7 represses the HMGA2 oncogene
    • Lee YS, Dutta A. The tumor suppressor microRNA let-7 represses the HMGA2 oncogene. Genes Dev., 21, 1025-1030 (2007).
    • (2007) Genes Dev. , vol.21 , pp. 1025-1030
    • Lee, Y.S.1    Dutta, A.2
  • 35
    • 45449093192 scopus 로고    scopus 로고
    • MicroRNA signatures of tumor-derived exosomes as diagnostic biomarkers of ovarian cancer
    • Taylor DD, Gercel-Taylor C. MicroRNA signatures of tumor-derived exosomes as diagnostic biomarkers of ovarian cancer. Gynecol. Oncol., 110, 13-21 (2008).
    • (2008) Gynecol. Oncol. , vol.110 , pp. 13-21
    • Taylor, D.D.1    Gercel-Taylor, C.2
  • 39
    • 70350238350 scopus 로고    scopus 로고
    • The biogenesis and function of PIWI proteins and piRNAs: Progress and prospect
    • Thomson T, Lin H. The biogenesis and function of PIWI proteins and piRNAs: progress and prospect. Annu. Rev. Cell Dev. Biol., 25, 355-376 (2009).
    • (2009) Annu. Rev. Cell Dev. Biol. , vol.25 , pp. 355-376
    • Thomson, T.1    Lin, H.2
  • 40
    • 79751517442 scopus 로고    scopus 로고
    • piRNA function in germline development
    • Cambridge (MA): Harvard Stem Cell Institute, Cambridge
    • Khurana JS, Theurkauf WE. piRNA function in germline development. "StemBook (Internet)" Cambridge (MA): Harvard Stem Cell Institute, Cambridge (2008).
    • (2008) StemBook (Internet)
    • Khurana, J.S.1    Theurkauf, W.E.2
  • 42
    • 79952792594 scopus 로고    scopus 로고
    • The Yb body, a major site for Piwi-associated RNA biogenesis and a gateway for Piwi expression and transport to the nucleus in somatic cells
    • Qi H, Watanabe T, Ku HY, Liu N, Zhong M, Lin H. The Yb body, a major site for Piwi-associated RNA biogenesis and a gateway for Piwi expression and transport to the nucleus in somatic cells. J. Biol. Chem., 286, 3789-3797 (2011).
    • (2011) J. Biol. Chem. , vol.286 , pp. 3789-3797
    • Qi, H.1    Watanabe, T.2    Ku, H.Y.3    Liu, N.4    Zhong, M.5    Lin, H.6
  • 43
    • 82255175105 scopus 로고    scopus 로고
    • Biology and applications of small nucleolar RNAs
    • Bratkovič T, Rogelj B. Biology and applications of small nucleolar RNAs. Cell. Mol. Life Sci., 68, 3843-3851 (2011).
    • (2011) Cell. Mol. Life Sci. , vol.68 , pp. 3843-3851
    • Bratkovič, T.1    Rogelj, B.2
  • 44
    • 0346099329 scopus 로고    scopus 로고
    • Components of U3 snoRNA-containing complexes shuttle between nuclei and the cytoplasm and differentially localize in nucleoli: Implications for assembly and function
    • Leary DJ, Terns MP, Huang S. Components of U3 snoRNA-containing complexes shuttle between nuclei and the cytoplasm and differentially localize in nucleoli: implications for assembly and function. Mol. Biol. Cell, 15, 281-293 (2004).
    • (2004) Mol. Biol. Cell , vol.15 , pp. 281-293
    • Leary, D.J.1    Terns, M.P.2    Huang, S.3
  • 45
    • 79960096964 scopus 로고    scopus 로고
    • Exosomes: Secreted vesicles and intercellular communications. F1000
    • Thery C. Exosomes: secreted vesicles and intercellular communications. F1000. Biol. Reprod., 3, 15 (2011).
    • (2011) Biol. Reprod. , vol.3 , pp. 15
    • Thery, C.1
  • 48
    • 0036119654 scopus 로고    scopus 로고
    • Saliva - The defender of the oral cavity
    • Amerongen AV, Veerman EC. Saliva - the defender of the oral cavity. Oral Dis., 8, 12-22 (2002).
    • (2002) Oral Dis. , vol.8 , pp. 12-22
    • Amerongen, A.V.1    Veerman, E.C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.