-
1
-
-
22844440427
-
Identification of hundreds of conserved and nonconserved human microRNAs
-
Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, et al. Identification of hundreds of conserved and nonconserved human microRNAs. Nat Genet 2005;37(7):766-70.
-
(2005)
Nat Genet
, vol.37
, Issue.7
, pp. 766-770
-
-
Bentwich, I.1
Avniel, A.2
Karov, Y.3
Aharonov, R.4
Gilad, S.5
Barad, O.6
-
2
-
-
11844262661
-
Phylogenetic shadowing and computational identification of human microRNA genes
-
Berezikov E, Guryev V, van de BJ, Wienholds E, Plasterk RH, Cuppen E. Phylogenetic shadowing and computational identification of human microRNA genes. Cell 2005;120(1):21-4.
-
(2005)
Cell
, vol.120
, Issue.1
, pp. 21-24
-
-
Berezikov, E.1
Guryev, V.2
van de, B.J.3
Wienholds, E.4
Plasterk, R.H.5
Cuppen, E.6
-
3
-
-
33845436047
-
Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans
-
Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, et al. Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans. Cell 2006;127(6):1193-207.
-
(2006)
Cell
, vol.127
, Issue.6
, pp. 1193-1207
-
-
Ruby, J.G.1
Jan, C.2
Player, C.3
Axtell, M.J.4
Lee, W.5
Nusbaum, C.6
-
4
-
-
34250877841
-
A mammalian microRNA expression atlas based on small RNA library sequencing
-
Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, et al. A mammalian microRNA expression atlas based on small RNA library sequencing. Cell 2007;129(7):1401-14.
-
(2007)
Cell
, vol.129
, Issue.7
, pp. 1401-1414
-
-
Landgraf, P.1
Rusu, M.2
Sheridan, R.3
Sewer, A.4
Iovino, N.5
Aravin, A.6
-
6
-
-
60149095444
-
Most mammalian mRNAs are conserved targets of microRNAs
-
Friedman RC, Farh KK, Burge CB, Bartel DP. Most mammalian mRNAs are conserved targets of microRNAs. Genome Res 2009;19(1):92-105.
-
(2009)
Genome Res
, vol.19
, Issue.1
, pp. 92-105
-
-
Friedman, R.C.1
Farh, K.K.2
Burge, C.B.3
Bartel, D.P.4
-
7
-
-
42049095870
-
MicroRNA expression profiling using microarrays
-
Liu CG, Calin GA, Volinia S, Croce CM. MicroRNA expression profiling using microarrays. Nat Protoc 2008;3(4):563-78.
-
(2008)
Nat Protoc
, vol.3
, Issue.4
, pp. 563-578
-
-
Liu, C.G.1
Calin, G.A.2
Volinia, S.3
Croce, C.M.4
-
8
-
-
27144543663
-
Simple, quantitative primer-extension PCR assay for direct monitoring of microRNAs and short-interfering RNAs
-
Raymond CK, Roberts BS, Garrett-Engele P, Lim LP, Johnson JM. Simple, quantitative primer-extension PCR assay for direct monitoring of microRNAs and short-interfering RNAs. RNA 2005;11(11):1737-44.
-
(2005)
RNA
, vol.11
, Issue.11
, pp. 1737-1744
-
-
Raymond, C.K.1
Roberts, B.S.2
Garrett-Engele, P.3
Lim, L.P.4
Johnson, J.M.5
-
9
-
-
3042752769
-
An oligonucleotide microchip for genome-wide microRNA profiling in human and mouse tissues
-
Liu CG, Calin GA, Meloon B, Gamliel N, Sevignani C, Ferracin M, et al. An oligonucleotide microchip for genome-wide microRNA profiling in human and mouse tissues. Proc Natl Acad Sci USA 2004;101(26):9740-4.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, Issue.26
, pp. 9740-9744
-
-
Liu, C.G.1
Calin, G.A.2
Meloon, B.3
Gamliel, N.4
Sevignani, C.5
Ferracin, M.6
-
10
-
-
20444460289
-
MicroRNA expression profiles classify human cancers
-
Lu J, Getz G, Miska EA, varez-Saavedra E, Lamb J, Peck D, et al. MicroRNA expression profiles classify human cancers. Nature 2005;435(7043):834-8.
-
(2005)
Nature
, vol.435
, Issue.7043
, pp. 834-838
-
-
Lu, J.1
Getz, G.2
Miska, E.A.3
varez-Saavedra, E.4
Lamb, J.5
Peck, D.6
-
11
-
-
27244433702
-
Real-time expression profiling of microRNA precursors in human cancer cell lines
-
Jiang J, Lee EJ, Gusev Y, Schmittgen TD. Real-time expression profiling of microRNA precursors in human cancer cell lines. Nucleic Acids Res 2005;33(17):5394-403.
-
(2005)
Nucleic Acids Res
, vol.33
, Issue.17
, pp. 5394-5403
-
-
Jiang, J.1
Lee, E.J.2
Gusev, Y.3
Schmittgen, T.D.4
-
12
-
-
0347755643
-
The microRNA Registry
-
Data issue
-
Griffiths-Jones S. The microRNA Registry. Nucleic Acids Res 2004;32(Data issue):D109-11.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Griffiths-Jones, S.1
-
13
-
-
0037197803
-
Identification of tissue-specific microRNAs from mouse
-
Lagos-Quintana M, Rauhut R, Yalcin A, Meyer J, Lendeckel W, Tuschl T. Identification of tissue-specific microRNAs from mouse. Curr Biol 2002;12(9):735-9.
-
(2002)
Curr Biol
, vol.12
, Issue.9
, pp. 735-739
-
-
Lagos-Quintana, M.1
Rauhut, R.2
Yalcin, A.3
Meyer, J.4
Lendeckel, W.5
Tuschl, T.6
-
14
-
-
18744367544
-
Clustering and conservation patterns of human microRNAs
-
Altuvia Y, Landgraf P, Lithwick G, Elefant N, Pfeffer S, Aravin A, et al. Clustering and conservation patterns of human microRNAs. Nucleic Acids Res 2005;33(8):2697-706.
-
(2005)
Nucleic Acids Res
, vol.33
, Issue.8
, pp. 2697-2706
-
-
Altuvia, Y.1
Landgraf, P.2
Lithwick, G.3
Elefant, N.4
Pfeffer, S.5
Aravin, A.6
-
15
-
-
27844508214
-
Identification of clustered microRNAs using an ab initio prediction method
-
Sewer A, Paul N, Landgraf P, Aravin A, Pfeffer S, Brownstein MJ, et al. Identification of clustered microRNAs using an ab initio prediction method. BMC Bioinformatics 2005;6:267.
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 267
-
-
Sewer, A.1
Paul, N.2
Landgraf, P.3
Aravin, A.4
Pfeffer, S.5
Brownstein, M.J.6
-
16
-
-
0142120587
-
Reduced accumulation of specific microRNAs in colorectal neoplasia
-
Michael MZ, O'Connor SM, van Holst Pellekaan NG, Young GP, James RJ. Reduced accumulation of specific microRNAs in colorectal neoplasia. Mol Cancer Res 2003;1(12):882-91.
-
(2003)
Mol Cancer Res
, vol.1
, Issue.12
, pp. 882-891
-
-
Michael, M.Z.1
O'Connor, S.M.2
van Holst Pellekaan, N.G.3
Young, G.P.4
James, R.J.5
-
17
-
-
2942534403
-
Human embryonic stem cells express a unique set of microRNAs
-
Suh MR, Lee Y, Kim JY, Kim SK, Moon SH, Lee JY, et al. Human embryonic stem cells express a unique set of microRNAs. Dev Biol 2004;270(2):488-98.
-
(2004)
Dev Biol
, vol.270
, Issue.2
, pp. 488-498
-
-
Suh, M.R.1
Lee, Y.2
Kim, J.Y.3
Kim, S.K.4
Moon, S.H.5
Lee, J.Y.6
-
18
-
-
34447134869
-
Patterns of known and novel small RNAs in human cervical cancer
-
Lui WO, Pourmand N, Patterson BK, Fire A. Patterns of known and novel small RNAs in human cervical cancer. Cancer Res 2007;67(13):6031-43.
-
(2007)
Cancer Res
, vol.67
, Issue.13
, pp. 6031-6043
-
-
Lui, W.O.1
Pourmand, N.2
Patterson, B.K.3
Fire, A.4
-
19
-
-
0037423845
-
Vertebrate microRNA genes
-
Lim LP, Glasner ME, Yekta S, Burge CB, Bartel DP. Vertebrate microRNA genes. Science 2003;299(5612):1540.
-
(2003)
Science
, vol.299
, Issue.5612
, pp. 1540
-
-
Lim, L.P.1
Glasner, M.E.2
Yekta, S.3
Burge, C.B.4
Bartel, D.P.5
-
20
-
-
77951233965
-
MicroRNAs: novel regulators involved in the pathogenesis of psoriasis?
-
Sonkoly E, Wei T, Janson PC, Saaf A, Lundeberg L, Tengvall-Linder M, et al. MicroRNAs: novel regulators involved in the pathogenesis of psoriasis? PLoS One 2007;2(7):e610.
-
(2007)
PLoS One
, vol.2
, Issue.7
-
-
Sonkoly, E.1
Wei, T.2
Janson, P.C.3
Saaf, A.4
Lundeberg, L.5
Tengvall-Linder, M.6
-
21
-
-
63149105412
-
Identification of novel Epstein-Barr virus microRNA genes from nasopharyngeal carcinomas
-
Zhu JY, Pfuhl T, Motsch N, Barth S, Nicholls J, Grasser F, et al. Identification of novel Epstein-Barr virus microRNA genes from nasopharyngeal carcinomas. J Virol 2009;83(7):3333-41.
-
(2009)
J Virol
, vol.83
, Issue.7
, pp. 3333-3341
-
-
Zhu, J.Y.1
Pfuhl, T.2
Motsch, N.3
Barth, S.4
Nicholls, J.5
Grasser, F.6
-
22
-
-
42449098100
-
Normalization of microRNA expression levels in quantitative RT-PCR assays: identification of suitable reference RNA targets in normal and cancerous human solid tissues
-
Peltier HJ, Latham GJ. Normalization of microRNA expression levels in quantitative RT-PCR assays: identification of suitable reference RNA targets in normal and cancerous human solid tissues. RNA 2008;14(5):844-52.
-
(2008)
RNA
, vol.14
, Issue.5
, pp. 844-852
-
-
Peltier, H.J.1
Latham, G.J.2
-
23
-
-
0023782352
-
Spliceosomal RNA U6 is remarkably conserved from yeast to mammals
-
Brow DA, Guthrie C. Spliceosomal RNA U6 is remarkably conserved from yeast to mammals. Nature 1988;334(6179):213-8.
-
(1988)
Nature
, vol.334
, Issue.6179
, pp. 213-218
-
-
Brow, D.A.1
Guthrie, C.2
-
24
-
-
0035710746
-
Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method
-
Livak KJ, Schmittgen TD. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods 2001;25(4):402-8.
-
(2001)
Methods
, vol.25
, Issue.4
, pp. 402-408
-
-
Livak, K.J.1
Schmittgen, T.D.2
-
25
-
-
0036845150
-
Evaluation of mRNA markers for the identification of menstrual blood
-
Bauer M, Patzelt D. Evaluation of mRNA markers for the identification of menstrual blood. J Forensic Sci 2002;47(6):1278-82.
-
(2002)
J Forensic Sci
, vol.47
, Issue.6
, pp. 1278-1282
-
-
Bauer, M.1
Patzelt, D.2
-
26
-
-
0038801413
-
Protamine mRNA as molecular marker for spermatozoa in semen stains
-
Bauer M, Patzelt D. Protamine mRNA as molecular marker for spermatozoa in semen stains. Int J Legal Med 2003;117(3):175-9.
-
(2003)
Int J Legal Med
, vol.117
, Issue.3
, pp. 175-179
-
-
Bauer, M.1
Patzelt, D.2
-
27
-
-
36749074002
-
Identification of menstrual blood by real time RT-PCR: technical improvements and the practical value of negative test results
-
Bauer M, Patzelt D. Identification of menstrual blood by real time RT-PCR: technical improvements and the practical value of negative test results. Forensic Sci Int 2008;174(1):55-9.
-
(2008)
Forensic Sci Int
, vol.174
, Issue.1
, pp. 55-59
-
-
Bauer, M.1
Patzelt, D.2
-
28
-
-
66749104582
-
New markers for old stains: stable mRNA markers for blood and saliva identification from up to 16-year-old stains
-
Zubakov D, Kokshoorn M, Kloosterman A, Kayser M. New markers for old stains: stable mRNA markers for blood and saliva identification from up to 16-year-old stains. Int J Legal Med 2009;123(1):71-4.
-
(2009)
Int J Legal Med
, vol.123
, Issue.1
, pp. 71-74
-
-
Zubakov, D.1
Kokshoorn, M.2
Kloosterman, A.3
Kayser, M.4
-
29
-
-
38649138798
-
Stable RNA markers for identification of blood and saliva stains revealed from whole genome expression analysis of time-wise degraded samples
-
Zubakov D, Hanekamp E, Kokshoorn M, van Ijcken W, Kayser M. Stable RNA markers for identification of blood and saliva stains revealed from whole genome expression analysis of time-wise degraded samples. Int J Legal Med 2008;122(2):135-42.
-
(2008)
Int J Legal Med
, vol.122
, Issue.2
, pp. 135-142
-
-
Zubakov, D.1
Hanekamp, E.2
Kokshoorn, M.3
van, I.W.4
Kayser, M.5
-
30
-
-
41149116231
-
Recovery and stability of RNA in vaginal swabs and blood, semen, and saliva stains
-
Setzer M, Juusola J, Ballantyne J. Recovery and stability of RNA in vaginal swabs and blood, semen, and saliva stains. J Forensic Sci 2008;53(2):296-305.
-
(2008)
J Forensic Sci
, vol.53
, Issue.2
, pp. 296-305
-
-
Setzer, M.1
Juusola, J.2
Ballantyne, J.3
-
31
-
-
34247892410
-
RNA in forensic science
-
Bauer M. RNA in forensic science. Forensic Sci Int Genet 2007;1(1):69-74.
-
(2007)
Forensic Sci Int Genet
, vol.1
, Issue.1
, pp. 69-74
-
-
Bauer, M.1
-
32
-
-
33645241407
-
The RIN: an RNA integrity number for assigning integrity values to RNA measurements
-
Schroeder A, Mueller O, Stocker S, Salowsky R, Leiber M, Gassmann M, et al. The RIN: an RNA integrity number for assigning integrity values to RNA measurements. BMC Mol Biol 2006;7:3.
-
(2006)
BMC Mol Biol
, vol.7
, pp. 3
-
-
Schroeder, A.1
Mueller, O.2
Stocker, S.3
Salowsky, R.4
Leiber, M.5
Gassmann, M.6
-
33
-
-
0345257783
-
Chipping away at the chip bias: RNA degradation in microarray analysis
-
Auer H, Lyianarachchi S, Newsom D, Klisovic MI, Marcucci G, Kornacker K. Chipping away at the chip bias: RNA degradation in microarray analysis. Nat Genet 2003;35(4):292-3.
-
(2003)
Nat Genet
, vol.35
, Issue.4
, pp. 292-293
-
-
Auer, H.1
Lyianarachchi, S.2
Newsom, D.3
Klisovic, M.I.4
Marcucci, G.5
Kornacker, K.6
-
34
-
-
77649230902
-
Improved microRNA quantification in total RNA from clinical samples
-
Andreasen D, Fog JU, Biggs W, Salomon J, Dahslveen IK, Baker A, et al. Improved microRNA quantification in total RNA from clinical samples. Methods 2010;50(4):S6-9.
-
(2010)
Methods
, vol.50
, Issue.4
-
-
Andreasen, D.1
Fog, J.U.2
Biggs, W.3
Salomon, J.4
Dahslveen, I.K.5
Baker, A.6
-
35
-
-
78649332827
-
miRNA analysis of prostate cancer by quantitative real time PCR: comparison between formalin-fixed paraffin embedded and fresh-frozen tissue
-
In press. doi:.
-
Leite KR, Canavez JM, Reis ST, Tomiyama AH, Piantino CB, Sanudo A, et al. miRNA analysis of prostate cancer by quantitative real time PCR: comparison between formalin-fixed paraffin embedded and fresh-frozen tissue. Urol Oncol In press. 2009. doi:.
-
(2009)
Urol Oncol
-
-
Leite, K.R.1
Canavez, J.M.2
Reis, S.T.3
Tomiyama, A.H.4
Piantino, C.B.5
Sanudo, A.6
-
36
-
-
65649087527
-
Robust global micro-RNA profiling with formalin-fixed paraffin-embedded breast cancer tissues
-
Hui AB, Shi W, Boutros PC, Miller N, Pintilie M, Fyles T, et al. Robust global micro-RNA profiling with formalin-fixed paraffin-embedded breast cancer tissues. Lab Invest 2009;89(5):597-606.
-
(2009)
Lab Invest
, vol.89
, Issue.5
, pp. 597-606
-
-
Hui, A.B.1
Shi, W.2
Boutros, P.C.3
Miller, N.4
Pintilie, M.5
Fyles, T.6
-
37
-
-
67650252543
-
MicroRNA expression profiling outperforms mRNA expression profiling in formalin-fixed paraffin-embedded tissues
-
Liu A, Tetzlaff MT, Vanbelle P, Elder D, Feldman M, Tobias JW, et al. MicroRNA expression profiling outperforms mRNA expression profiling in formalin-fixed paraffin-embedded tissues. Int J Clin Exp Pathol 2009;2(6):519-27.
-
(2009)
Int J Clin Exp Pathol
, vol.2
, Issue.6
, pp. 519-527
-
-
Liu, A.1
Tetzlaff, M.T.2
Vanbelle, P.3
Elder, D.4
Feldman, M.5
Tobias, J.W.6
-
38
-
-
61849181477
-
Identification of forensically relevant body fluids using a panel of differentially expressed microRNAs
-
Hanson EK, Lubenow H, Ballantyne J. Identification of forensically relevant body fluids using a panel of differentially expressed microRNAs. Anal Biochem 2009;387(2):303-14.
-
(2009)
Anal Biochem
, vol.387
, Issue.2
, pp. 303-314
-
-
Hanson, E.K.1
Lubenow, H.2
Ballantyne, J.3
-
39
-
-
77954563216
-
MicroRNA markers for forensic body fluid identification obtained from microarray screening and quantitative RT-PCR confirmation
-
Zubakov D, Boersma AW, Choi Y, van Kuijk PF, Wiemer EA, Kayser M. MicroRNA markers for forensic body fluid identification obtained from microarray screening and quantitative RT-PCR confirmation. Int J Legal Med 2010;124(3):217-26.
-
(2010)
Int J Legal Med
, vol.124
, Issue.3
, pp. 217-226
-
-
Zubakov, D.1
Boersma, A.W.2
Choi, Y.3
van Kuijk, P.F.4
Wiemer, E.A.5
Kayser, M.6
-
40
-
-
58449134534
-
Small silencing RNAs: an expanding universe
-
Ghildiyal M, Zamore PD. Small silencing RNAs: an expanding universe. Nat Rev Genet 2009;10(2):94-108.
-
(2009)
Nat Rev Genet
, vol.10
, Issue.2
, pp. 94-108
-
-
Ghildiyal, M.1
Zamore, P.D.2
|