-
1
-
-
0036999722
-
Structure, dynamics, and energetics of the primary photochemistry of Photosystem II of oxygenic photosynthesis
-
DOI 10.1146/annurev.arplant.53.100301.135238
-
Diner BA, Rappaport F (2002) Structure, dynamics, and energetics of the primary photochemistry of photosystem II of oxygenic photosynthesis. Annu Rev Plant Biol 53:551-580. (Pubitemid 36257507)
-
(2002)
Annual Review of Plant Biology
, vol.53
, pp. 551-580
-
-
Diner, B.A.1
Rappaport, F.2
-
2
-
-
57849146011
-
Photosystem II: The machinery of photosynthetic water splitting
-
DOI 10.1007/s11120-008-9345-7
-
Renger G, Renger T (2008) Photosystem II: The machinery of photosynthetic water splitting. Photosynth Res 98(1-3):53-80. (Pubitemid 50289510)
-
(2008)
Photosynthesis Research
, vol.98
, Issue.1-3
, pp. 53-80
-
-
Renger, G.1
Renger, T.2
-
3
-
-
84859492614
-
Ultrafast primary reactions in the photosystems of oxygen evolving organisms
-
eds Braun M, Gilch P, Zinth W (Springer, Dordrecht, The Netherlands)
-
Holzwarth AR (2008) Ultrafast primary reactions in the photosystems of oxygen evolving organisms. Ultrashort Laser Pulses in Biology and Medicine, Biological and Medical Physics, Biomedical Engineering, eds Braun M, Gilch P, Zinth W (Springer, Dordrecht, The Netherlands), pp 141-164.
-
(2008)
Ultrashort Laser Pulses in Biology and Medicine, Biological and Medical Physics, Biomedical Engineering
, pp. 141-164
-
-
Holzwarth, A.R.1
-
4
-
-
82755181814
-
Charge separation in photosystem II: A comparative and evolutionary overview
-
Cardona T, Sedoud A, Cox N, Rutherford AW (2012) Charge separation in photosystem II: A comparative and evolutionary overview. Biochim Biophys Acta 1817(1):26-43.
-
(2012)
Biochim Biophys Acta
, vol.1817
, Issue.1
, pp. 26-43
-
-
Cardona, T.1
Sedoud, A.2
Cox, N.3
Rutherford, A.W.4
-
5
-
-
82755182962
-
Light-induced quinone reduction in photosystem II
-
Müh F, Glöckner C, Hellmich J, Zouni A (2012) Light-induced quinone reduction in photosystem II. Biochim Biophys Acta 1817(1):44-65.
-
(2012)
Biochim Biophys Acta
, vol.1817
, Issue.1
, pp. 44-65
-
-
Müh, F.1
Glöckner, C.2
Hellmich, J.3
Zouni, A.4
-
6
-
-
33846571216
-
The iron-quinone acceptor complex
-
eds Wydrzynski T, Satoh K (Springer, Dordrecht, The Netherlands)
-
Petrouleas V, Crofts AR (2005) The iron-quinone acceptor complex. Photosystem II: The Light-Driven Water: Plastoquinone Oxidoreductase, eds Wydrzynski T, Satoh K (Springer, Dordrecht, The Netherlands), pp 177-206.
-
(2005)
Photosystem II: The Light-Driven Water: Plastoquinone Oxidoreductase
, pp. 177-206
-
-
Petrouleas, V.1
Crofts, A.R.2
-
7
-
-
79957982039
-
Structure of the catalytic, inorganic core of oxygen-evolving photosystem II at 1.9 Å resolution
-
Kawakami K, Umena Y, Kamiya N, Shen J-R (2011) Structure of the catalytic, inorganic core of oxygen-evolving photosystem II at 1.9 Å resolution. J Photochem Photobiol B 104(1-2):9-18.
-
(2011)
J Photochem Photobiol B
, vol.104
, Issue.1-2
, pp. 9-18
-
-
Kawakami, K.1
Umena, Y.2
Kamiya, N.3
Shen, J.-R.4
-
8
-
-
27144512716
-
Control of quinone redox potentials in Photosystem II: Electron transfer and photoprotection
-
DOI 10.1021/ja052567r
-
Ishikita H, Knapp E-W (2005) Control of quinone redox potentials in photosystem II: Electron transfer and photoprotection. J Am Chem Soc 127(42):14714-14720. (Pubitemid 41511009)
-
(2005)
Journal of the American Chemical Society
, vol.127
, Issue.42
, pp. 14714-14720
-
-
Ishikita, H.1
Knapp, E.-W.2
-
9
-
-
85028099698
-
Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å
-
Umena Y, Kawakami K, Shen J-R, Kamiya N (2011) Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å. Nature 473(7345):55-60.
-
(2011)
Nature
, vol.473
, Issue.7345
, pp. 55-60
-
-
Umena, Y.1
Kawakami, K.2
Shen, J.-R.3
Kamiya, N.4
-
10
-
-
0000847336
-
Kinetics of proton uptake and the oxidation-reduction reactions of the quinone acceptor complex of photosystem-II from pea chloroplasts
-
ed Sybesma C (Martinus Nijhoff/Dr. W. Junk Publishers, The Hague, The Netherlands)
-
Robinson HH, Crofts AR (1984) Kinetics of proton uptake and the oxidation-reduction reactions of the quinone acceptor complex of photosystem-II from pea chloroplasts. Advances in Photosynthesis Research, ed Sybesma C (Martinus Nijhoff/Dr. W. Junk Publishers, The Hague, The Netherlands), Vol 1, pp 477-480.
-
(1984)
Advances in Photosynthesis Research
, vol.1
, pp. 477-480
-
-
Robinson, H.H.1
Crofts, A.R.2
-
12
-
-
0002320878
-
Catalytic sites for reduction and oxidation of quinones
-
eds Papa S, Chance B, Ernster L (Plenum, New York)
-
Crofts AR, et al. (1987) Catalytic sites for reduction and oxidation of quinones. Cytochrome Systems: Molecular Biology and Bioenergetics, eds Papa S, Chance B, Ernster L (Plenum, New York), pp 617-624.
-
(1987)
Cytochrome Systems: Molecular Biology and Bioenergetics
, pp. 617-624
-
-
Crofts, A.R.1
-
13
-
-
0043145962
-
Relevance of the photosynthetic reaction center from purple bacteria to the structure of photosystem II
-
Michel H, Deisenhofer J (1988) Relevance of the photosynthetic reaction center from purple bacteria to the structure of photosystem II. Biochemistry 27:1-7.
-
(1988)
Biochemistry
, vol.27
, pp. 1-7
-
-
Michel, H.1
Deisenhofer, J.2
-
15
-
-
1242347393
-
Proton and electron transfer in the acceptor quinone complex of photosynthetic reaction centers from Rhodobacter sphaeroides
-
Wraight CA (2004) Proton and electron transfer in the acceptor quinone complex of photosynthetic reaction centers from Rhodobacter sphaeroides. Front Biosci 9: 309-337.
-
(2004)
Front Biosci
, vol.9
, pp. 309-337
-
-
Wraight, C.A.1
-
16
-
-
0034640331
-
Proton and electron transfer in bacterial reaction centers
-
DOI 10.1016/S0005-2728(00)00065-7, PII S0005272800000657
-
Okamura MY, Paddock ML, Graige MS, Feher G (2000) Proton and electron transfer in bacterial reaction centers. Biochim Biophys Acta 1458(1):148-163. (Pubitemid 30254256)
-
(2000)
Biochimica et Biophysica Acta - Bioenergetics
, vol.1458
, Issue.1
, pp. 148-163
-
-
Okamura, M.Y.1
Paddock, M.L.2
Graige, M.S.3
Feher, G.4
-
17
-
-
3042687860
-
B redox state in reaction centers from Rhodobacter sphaeroides
-
B redox state in reaction centers from Rhodobacter sphaeroides. J Am Chem Soc 126(25):8059-8064.
-
(2004)
J Am Chem Soc
, vol.126
, Issue.25
, pp. 8059-8064
-
-
Ishikita, H.1
Knapp, E.-W.2
-
18
-
-
11844302809
-
Energetics of quinone-dependent electron and proton transfers in Rhodobacter sphaeroides photosynthetic reaction centers
-
DOI 10.1021/bi048348k
-
Zhu Z, Gunner MR (2005) Energetics of quinone-dependent electron and proton transfers in Rhodobacter sphaeroides photosynthetic reaction centers. Biochemistry 44(1):82-96. (Pubitemid 40095709)
-
(2005)
Biochemistry
, vol.44
, Issue.1
, pp. 82-96
-
-
Zhu, Z.1
Gunner, M.R.2
-
19
-
-
34447576871
-
-•) in reaction centers from Rhodobacter sphaeroides
-
-•) in reaction centers from Rhodobacter sphaeroides. Biochemistry 46(28):8234-8243.
-
(2007)
Biochemistry
, vol.46
, Issue.28
, pp. 8234-8243
-
-
Paddock, M.L.1
-
20
-
-
79953691142
-
A site
-
A site. J Am Chem Soc 133(14):5525-5537.
-
(2011)
J Am Chem Soc
, vol.133
, Issue.14
, pp. 5525-5537
-
-
Martin, E.1
-
21
-
-
84862238563
-
Govindjee (2012) Photosystem II and the unique role of bicarbonate: A historical perspective
-
Shevela D, Eaton-Rye JJ, Shen J-R, Govindjee (2012) Photosystem II and the unique role of bicarbonate: A historical perspective. Biochim Biophys Acta 1817(8):1134-1151.
-
(1817)
Biochim Biophys Acta
, Issue.8
, pp. 1134-1151
-
-
Shevela, D.1
Eaton-Rye, J.J.2
Shen, J.-R.3
-
23
-
-
33947463803
-
Imidazole catalysis. II. The reaction of substituted imidazoles with phenyl acetates in aqueous solution
-
Bruice TC, Schmir GL (1958) Imidazole catalysis. II. The reaction of substituted imidazoles with phenyl acetates in aqueous solution. J Am Chem Soc 80(1):148-156.
-
(1958)
J Am Chem Soc
, vol.80
, Issue.1
, pp. 148-156
-
-
Bruice, T.C.1
Schmir, G.L.2
-
24
-
-
0032562210
-
Energetics of electron-transfer and protonation reactions of the quinones in the photosynthetic reaction center of Rhodopseudomonas viridis
-
DOI 10.1021/bi971921y
-
Rabenstein B, Ullmann GM, Knapp E-W (1998) Energetics of electron-transfer and protonation reactions of the quinones in the photosynthetic reaction center of Rhodopseudomonas viridis. Biochemistry 37(8):2488-2495. (Pubitemid 28119324)
-
(1998)
Biochemistry
, vol.37
, Issue.8
, pp. 2488-2495
-
-
Rabenstein, B.1
Ullmann, G.M.2
Knapp, E.-W.3
-
26
-
-
34249694922
-
-
eds Kohen A, Limbach H-H (CRC Press, Boca Raton, FL)
-
Frey PA (2006) Isotope Effects in Chemistry and Biology, eds Kohen A, Limbach H-H (CRC Press, Boca Raton, FL), pp 975 -993.
-
(2006)
Isotope Effects in Chemistry and Biology
, pp. 975-993
-
-
Frey, P.A.1
-
27
-
-
2442606719
-
The Low Barrier Hydrogen Bond (LBHB) Proposal Revisited: The Case of the Asp... His Pair in Serine Proteases
-
DOI 10.1002/prot.20096
-
Schutz CN, Warshel A (2004) The low barrier hydrogen bond (LBHB) proposal revisited: The case of the Asp... His pair in serine proteases. Proteins 55(3):711-723. (Pubitemid 38620094)
-
(2004)
Proteins: Structure, Function and Genetics
, vol.55
, Issue.3
, pp. 711-723
-
-
Schutz, C.N.1
Warshel, A.2
-
29
-
-
0142063412
-
Reduction Potentials of Rieske Clusters: Importance of the Coupling between Oxidation State and Histidine Protonation State
-
DOI 10.1021/bi0350957
-
Zu Y, et al. (2003) Reduction potentials of Rieske clusters: Importance of the coupling between oxidation state and histidine protonation state. Biochemistry 42(42): 12400-12408. (Pubitemid 37296516)
-
(2003)
Biochemistry
, vol.42
, Issue.42
, pp. 12400-12408
-
-
Zu, Y.1
Couture, M.M.-J.2
Kolling, D.R.J.3
Crofts, A.R.4
Eltis, L.D.5
Fee, J.A.6
Hirst, J.7
-
30
-
-
77953296900
-
NMR investigations of the Rieske protein from Thermus thermophilus support a coupled proton and electron transfer mechanism
-
Hsueh KL, Westler WM, Markley JL (2010) NMR investigations of the Rieske protein from Thermus thermophilus support a coupled proton and electron transfer mechanism. J Am Chem Soc 132(23):7908-7918.
-
(2010)
J Am Chem Soc
, vol.132
, Issue.23
, pp. 7908-7918
-
-
Hsueh, K.L.1
Westler, W.M.2
Markley, J.L.3
-
31
-
-
0035799313
-
B pocket studied by Fourier transform infrared spectroscopy
-
B pocket studied by Fourier transform infrared spectroscopy. Biochemistry 40(13):4044-4052.
-
(2001)
Biochemistry
, vol.40
, Issue.13
, pp. 4044-4052
-
-
Berthomieu, C.1
Hienerwadel, R.2
-
32
-
-
0025134851
-
Pathway of proton transfer in bacterial reaction centers: Replacement of serine-L223 by alanine inhibits electron and proton transfers associated with reduction of quinone to dihydroquinone
-
Paddock ML, McPherson PH, Feher G, Okamura MY (1990) Pathway of proton transfer in bacterial reaction centers: Replacement of serine-L223 by alanine inhibits electron and proton transfers associated with reduction of quinone to dihydroquinone. Proc Natl Acad Sci USA 87(17):6803-6807.
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, Issue.17
, pp. 6803-6807
-
-
Paddock, M.L.1
McPherson, P.H.2
Feher, G.3
Okamura, M.Y.4
-
33
-
-
0028021632
-
Stabilization of reduced primary quinone by proton uptake in reaction centers of Rhodobacter sphaeroides
-
Kálmán L, Maróti P (1994) Stabilization of reduced primary quinone by proton uptake in reaction centers of Rhodobacter sphaeroides. Biochemistry 33(31):9237-9244.
-
(1994)
Biochemistry
, vol.33
, Issue.31
, pp. 9237-9244
-
-
Kálmán, L.1
Maróti, P.2
-
34
-
-
0030904273
-
Light-induced structural changes in photosynthetic reaction center: Implications for mechanism of electron-proton transfer
-
DOI 10.1126/science.276.5313.812
-
Stowell MHB, et al. (1997) Light-induced structural changes in photosynthetic reaction center: Implications for mechanism of electron-proton transfer. Science 276(5313):812-816. (Pubitemid 27199864)
-
(1997)
Science
, vol.276
, Issue.5313
, pp. 812-816
-
-
Stowell, M.H.B.1
McPhillips, T.M.2
Rees, D.C.3
Soltis, S.M.4
Abresch, E.5
Feher, G.6
-
35
-
-
70349781908
-
Structural coupling of a tyrosine side chain with the non-heme iron center in photosystem II as revealed by light-induced Fourier transform infrared difference spectroscopy
-
Takahashi R, Boussac A, Sugiura M, Noguchi T (2009) Structural coupling of a tyrosine side chain with the non-heme iron center in photosystem II as revealed by light-induced Fourier transform infrared difference spectroscopy. Biochemistry 48(38):8994-9001.
-
(2009)
Biochemistry
, vol.48
, Issue.38
, pp. 8994-9001
-
-
Takahashi, R.1
Boussac, A.2
Sugiura, M.3
Noguchi, T.4
-
36
-
-
0029104356
-
- states in Photosystem II
-
- states in Photosystem II. Plant Physiol 107(1):187-197.
-
(1995)
Plant Physiol
, vol.107
, Issue.1
, pp. 187-197
-
-
Maenpaa, P.1
-
37
-
-
79953130211
-
Carboxylate shifts steer interquinone electron transfer in photosynthesis
-
Chernev P, Zaharieva I, Dau H, Haumann M (2011) Carboxylate shifts steer interquinone electron transfer in photosynthesis. J Biol Chem 286(7):5368-5374.
-
(2011)
J Biol Chem
, vol.286
, Issue.7
, pp. 5368-5374
-
-
Chernev, P.1
Zaharieva, I.2
Dau, H.3
Haumann, M.4
-
38
-
-
25444441462
-
Secondary quinone in photosystem II of Thermosynechococcus elongatus: Semiquinone-iron EPR signals and temperature dependence of electron transfer
-
Fufezan C, Zhang C, Krieger-Liszkay A, Rutherford AW (2005) Secondary quinone in photosystem II of Thermosynechococcus elongatus: Semiquinone-iron EPR signals and temperature dependence of electron transfer. Biochemistry 44(38):12780-12789.
-
(2005)
Biochemistry
, vol.44
, Issue.38
, pp. 12780-12789
-
-
Fufezan, C.1
Zhang, C.2
Krieger-Liszkay, A.3
Rutherford, A.W.4
-
39
-
-
78650289973
-
Effects of formate binding on the quinone-iron electron acceptor complex of photosystem II
-
Sedoud A, et al. (2011) Effects of formate binding on the quinone-iron electron acceptor complex of photosystem II. Biochim Biophys Acta 1807(2):216-226.
-
(2011)
Biochim Biophys Acta
, vol.1807
, Issue.2
, pp. 216-226
-
-
Sedoud, A.1
-
40
-
-
48549108839
-
A new EPR signal attributed to the primary plastosemiquinone acceptor in Photosystem II
-
Rutherford AW, Zimmermann J-L (1984) A new EPR signal attributed to the primary plastosemiquinone acceptor in Photosystem II. Biochim Biophys Acta 767(1):168-175.
-
(1984)
Biochim Biophys Acta
, vol.767
, Issue.1
, pp. 168-175
-
-
Rutherford, A.W.1
Zimmermann, J.-L.2
-
41
-
-
70349928560
-
The semiquinone-iron complex of photosystem II: Structural insights from ESR and theoretical simulation; evidence that the native ligand to the non-heme iron is carbonate
-
Cox N, et al. (2009) The semiquinone-iron complex of photosystem II: Structural insights from ESR and theoretical simulation; evidence that the native ligand to the non-heme iron is carbonate. Biophys J 97(7):2024-2033.
-
(2009)
Biophys J
, vol.97
, Issue.7
, pp. 2024-2033
-
-
Cox, N.1
-
42
-
-
0029584591
-
13C-labeled bicarbonate
-
DOI 10.1021/bi00050a008
-
13C-labeled bicarbonate. Biochemistry 34(50):16288-16297. (Pubitemid 26006471)
-
(1995)
Biochemistry
, vol.34
, Issue.50
, pp. 16288-16297
-
-
Hienerwadel, R.1
Berthomieu, C.2
-
43
-
-
2542632099
-
Hydroxyl radical generation by photosystem II
-
DOI 10.1021/bi036219i
-
Pospísil P, Arató A, Krieger-Liszkay A, Rutherford AW (2004) Hydroxyl radical generation by photosystem II. Biochemistry 43(21):6783-6792. (Pubitemid 38697577)
-
(2004)
Biochemistry
, vol.43
, Issue.21
, pp. 6783-6792
-
-
Pospisil, P.1
Arato, A.2
Krieger-Liszkay, A.3
Rutherford, A.W.4
-
44
-
-
0029127671
-
Specific degradation of the D1 protein of photosystem II by treatment with hydrogen peroxide in darkness: Implications for the mechanism of degradation of the D1 protein under illumination
-
Miyao M, Ikeuchi M, Yamamoto N, Ono T (1995) Specific degradation of the D1 protein of photosystem II by treatment with hydrogen peroxide in darkness: Implications for the mechanism of degradation of the D1 protein under illumination. Biochemistry 34(31):10019-10026.
-
(1995)
Biochemistry
, vol.34
, Issue.31
, pp. 10019-10026
-
-
Miyao, M.1
Ikeuchi, M.2
Yamamoto, N.3
Ono, T.4
-
45
-
-
4043119110
-
Nitric oxide and cellular stress response in brain aging and neurodegenerative disorders: The role of vitagenes
-
Calabrese V, Boyd-Kimball D, Scapagnini G, Butterfield DA (2004) Nitric oxide and cellular stress response in brain aging and neurodegenerative disorders: The role of vitagenes. In Vivo 18(3):245-267.
-
(2004)
In Vivo
, vol.18
, Issue.3
, pp. 245-267
-
-
Calabrese, V.1
Boyd-Kimball, D.2
Scapagnini, G.3
Butterfield, D.A.4
-
46
-
-
0023429786
-
Identification of a primary in vivo degradation product of the rapidly-turning-over 32 kd protein of photosystem II
-
Greenberg BM, Gaba V, Mattoo AK, Edelman M (1987) Identification of a primary in vivo degradation product of the rapidly-turning-over 32 kd protein of photosystem II. EMBO J 6(10):2865-2869.
-
(1987)
EMBO J
, vol.6
, Issue.10
, pp. 2865-2869
-
-
Greenberg, B.M.1
Gaba, V.2
Mattoo, A.K.3
Edelman, M.4
-
48
-
-
0037161809
-
The catalytic pathway of horseradish peroxidase at high resolution
-
DOI 10.1038/417463a
-
Berglund GI, et al. (2002) The catalytic pathway of horseradish peroxidase at high resolution. Nature 417(6887):463-468. (Pubitemid 34563541)
-
(2002)
Nature
, vol.417
, Issue.6887
, pp. 463-468
-
-
Berglund, G.I.1
Carlsson, G.H.2
Smith, A.T.3
Szoke, H.4
Henriksen, A.5
Hajdu, J.6
-
50
-
-
84986512474
-
CHARMM: A program for macromolecular energy minimization and dynamics calculations
-
Brooks BR, et al. (1983) CHARMM: A program for macromolecular energy minimization and dynamics calculations. J Comput Chem 4(2):187-217.
-
(1983)
J Comput Chem
, vol.4
, Issue.2
, pp. 187-217
-
-
Brooks, B.R.1
-
51
-
-
0041784950
-
All-atom empirical potential for molecular modeling and dynamics studies of proteins
-
MacKerell AD, Jr., et al. (1998) All-atom empirical potential for molecular modeling and dynamics studies of proteins. J Phys Chem B 102(18):3586-3616.
-
(1998)
J Phys Chem B
, vol.102
, Issue.18
, pp. 3586-3616
-
-
MacKerell Jr., A.D.1
-
52
-
-
80052582595
-
Distribution of the cationic state over the chlorophyll pair of the photosystem II reaction center
-
Saito K, et al. (2011) Distribution of the cationic state over the chlorophyll pair of the photosystem II reaction center. J Am Chem Soc 133(36):14379-14388.
-
(2011)
J Am Chem Soc
, vol.133
, Issue.36
, pp. 14379-14388
-
-
Saito, K.1
-
54
-
-
84872522131
-
-
Schrödinger, LLC, New York, NY
-
(2012) QSite, version 5.8 (Schrödinger, LLC, New York, NY).
-
(2012)
QSite, Version 5.8
-
-
|