Distribution of the cationic state over the chlorophyll pair of the photosystem II reaction center

Journal of the American Chemical Society

Volumn 133, Issue 36, 2011, Pages 14379-14388

  Saito, Keisuke ^a   Ishida, Toyokazu ^b   Sugiura, Miwa ^c,d   Kawakami, Keisuke ^e   Umena, Yasufumi ^f   Kamiya, Nobuo ^e   Shen, Jian Ren ^g   Ishikita, Hiroshi ^a,d  

^a KYOTO UNIVERSITY   (Japan)

^b NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY AIST   (Japan)

^c EHIME UNIVERSITY   (Japan)

^d JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

^e Osaka Prefecture University   (Japan)

^f OSAKA UNIVERSITY   (Japan)

^g OKAYAMA UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ABSTRACTORS; CATIONIC STATE; CHARGE RATIO; HETERODIMERS; ONE-ELECTRON OXIDATION; PHOTOSYSTEM II; PROTONATION PATTERN; PROTONATION STATE; QM/MM CALCULATIONS; REACTION CENTER; REDOX POTENTIALS; WATER OXIDATION;

CHLOROPHYLL; CRYSTAL STRUCTURE; MANGANESE; MANGANESE COMPOUNDS; OXIDATION; PROTONATION; REDOX REACTIONS;

MANGANESE REMOVAL (WATER TREATMENT);

ARGININE; ASPARAGINE; ASPARTIC ACID; CATION; CHLOROPHYLL; GLUTAMIC ACID; HETERODIMER; HISTONE; OXYGEN; PHENYLALANINE; WATER;

ARTICLE; ELECTRON; NONHUMAN; OXIDATION; OXIDATION REDUCTION REACTION; PHOTOSYSTEM II; PROTON TRANSPORT; TITRIMETRY;

AMINO ACID SEQUENCE; CALCIUM; CATIONS; CHLOROPHYLL; MANGANESE; MOLECULAR SEQUENCE DATA; OXIDATION-REDUCTION; PHOTOSYSTEM II PROTEIN COMPLEX;

EID: 80052582595     PISSN: 00027863     EISSN: 15205126     Source Type: Journal    
DOI: 10.1021/ja203947k     Document Type: Article

References (67)

1. Prokhorenko, V. I.; Holzwarth, A. R. J. Phys. Chem. B 2000, 104, 11563-11578
2. Diner, B. A.; Rappaport, F. Annu. Rev. Plant Biol. 2002, 53, 551-580
3. Renger, G.; Renger, T. Photosynth. Res. 2008, 98, 53-80
4. Klimov, V. V.; Allakhverdiev, S. I.; Demeter, S.; Krasnovskii, A. A. Dokl. Akad. Nauk SSSR 1979, 249, 227-230
5. Rutherford, A. W.; Mullet, J. E.; Crofts, A. R. FEBS Lett. 1981, 123, 235-237
6. Watanabe, T.; Kobayashi, M. In Chlorophylls; Scheer, H., Ed.; CRC Press: Boca Raton, FL, 1991; pp 287-303.
7. Ohashi, S.; Iemura, T.; Miyashita, H.; Watanabe, T.; Kobayashi, M. Photomed. Photobiol. 2008, 30, 13-18
8. Kobayashi, M.; Ohashi, S.; Fukuyo, S.; Kasahara, M.; Watanabe, T. In Photosynthesis: Energy from the Sun; Allen, J. F.; Gantt, E.; Golbeck, J. H.; Osmond, B., Eds.; Springer: New York, 2008; pp 113-116.
9. Zouni, A.; Witt, H. T.; Kern, J.; Fromme, P.; Krau, N.; Saenger, W.; Orth, P. Nature 2001, 409, 739-743
10. Rappaport, F.; Guergova-Kuras, M.; Nixon, P. J.; Diner, B. A.; Lavergne, J. Biochemistry 2002, 41, 8518-8527
11. Krieger, A.; Rutherford, A. W.; Johnson, G. N. Biochim. Biophys. Acta 1995, 1229, 193-201
12. Johnson, G. N.; Rutherford, A. W.; Krieger, A. Biochim. Biophys. Acta 1995, 1229, 202-207
13. Grabolle, M.; Dau, H. Biochim. Biophys. Acta 2005, 1708, 209-218
14. Loll, B.; Kern, J.; Saenger, W.; Zouni, A.; Biesiadka, J. Nature 2005, 438, 1040-1044
15. Ishikita, H.; Saenger, W.; Biesiadka, J.; Loll, B.; Knapp, E.-W. Proc. Natl. Acad. Sci. U.S.A. 2006, 103, 9855-9860
16. Kato, Y.; Sugiura, M.; Oda, A.; Watanabe, T. Proc. Natl. Acad. Sci. U.S.A. 2009, 106, 17365-17370
17. Renger, G.; Holzwarth, A. R. In Photosystem II; Wydrqynski, T.; Satoh, K., Eds.; Springer: Dordrecht, The Netherlands, 2005; pp 139-175.
18. Renger, G. In Primary Processes of Photosynthesis: Principles and Apparatus, Part II; Renger, G., Ed.; Royal Society Chemistry: Cambridge, UK, 2008; pp 237-290.
19. Dau, H.; Haumann, M. Coord. Chem. Rev. 2008, 252, 273-295
20. Rappaport, F.; Diner, B. A. Coord. Chem. Rev. 2008, 252, 259-272
21. Rigby, S. E. J.; Nugent, J. H. A.; O'Malley, P. J. Biochemistry 1994, 33, 10043-10050
22. Diner, B. A.; Schlodder, E.; Nixon, P. J.; Coleman, W. J.; Rappaport, F.; Lavergne, J.; Vermaas, W. F. J.; Chisholm, D. A. Biochemistry 2001, 40, 9265-9281
23. Michel, H.; Deisenhofer, J. Biochemistry 1988, 27, 1-7
24. Guskov, A.; Kern, J.; Gabdulkhakov, A.; Broser, M.; Zouni, A.; Saenger, W. Nat. Struct. Mol. Biol. 2009, 16, 334-342
25. Umena, Y.; Kawakami, K.; Shen, J.-R.; Kamiya, N. Nature 2011, 473, 55-60
26. Noguchi, T.; Tomo, T.; Inoue, Y. Biochemistry 1998, 37, 13614-13625
27. Sugiura, M.; Rappaport, F.; Brettel, K.; Noguchi, T.; Rutherford, A. W.; Boussac, A. Biochemistry 2004, 43, 13549-13563
28. Brooks, B. R.; Bruccoleri, R. E.; Olafson, B. D.; States, D. J.; Swaminathan, S.; Karplus, M. J. Comput. Chem. 1983, 4, 187-217
29. MacKerell, A. D., Jr. J. Phys. Chem. B 1998, 102, 3586-3616
30. Rabenstein, B.; Ullmann, G. M.; Knapp, E.-W. Eur. Bophys. J. 1998, 27, 626-637
31. Bayly, C. I.; Cieplak, P.; Cornell, W. D.; Kollman, P. A. J. Phys. Chem. 1993, 97, 10269-10280
32. Jaguar, version 7.5; Schrödinger, LLC: New York, NY, 2008.
33. Bashford, D.; Karplus, M. Biochemistry 1990, 29, 10219-10225
34. Ishikita, H.; Biesiadka, J.; Loll, B.; Saenger, W.; Knapp, E. W. Angew. Chem., Int. Ed. Engl. 2006, 45, 1964-1965
35. Rabenstein, B.; Knapp, E. W. Biophys. J. 2001, 80, 1141-1150
36. Kobayashi, M.; Ohashi, S.; Iwamoto, K.; Shiraiwa, Y.; Kato, Y.; Watanabe, T. Biochim. Biophys. Acta 2007, 1767, 596-602
37. Fajer, J.; Fujita, I.; Davis, M. S.; Forman, A.; Hanson, L. K.; Smith, K. M. In Electrochemical and spectrochemical studies of biological redox components; Kadish, K. M., Ed.; American Chemical Society: Washington, D.C., 1982; Chapter 21.
38. Maggiora, L. L.; Petke, J. D.; Gopal, D.; Iwamoto, R. T.; Maggiora, G. M. Photochem. Photobiol. 1985, 42, 69-75
39. Cotton, T. M.; van Duyne, R. P. J. Am. Chem. Soc. 1979, 101, 7605-7612
40. Wasielewski, M. R.; Smith, R. L.; Kostka, A. G. J. Am. Chem. Soc. 1980, 102, 6923-6928
41. QSite, version 5.6; Schrödinger, LLC: New York, NY, 2010.
42. Ludwig, M. L.; Pattridge, K. A.; Metzger, A. L.; Dixon, M. M.; Eren, M.; Feng, Y.; Swenson, R. P. Biochemistry 1997, 36, 1259-1280
43. Ishikita, H. J. Biol. Chem. 2007, 282, 25240-25246
44. Yeates, T. O.; Komiya, H.; Chirino, A.; Rees, D. C.; Allen, J. P.; Feher, G. Proc. Natl. Acad. Sci. U.S.A. 1988, 85, 7993-7997
45. Ermler, U.; Fritzsch, G.; Buchanan, S. K.; Michel, H. Structure 1994, 2, 925-936
46. Stowell, M. H. B.; McPhillips, T. M.; Rees, D. C.; Solitis, S. M.; Abresch, E.; Feher, G. Science 1997, 276, 812-816
47. Breton, J.; Boullais, C.; Burie, J. R.; Nabedryk, E.; Mioskowski, C. Biochemistry 1994, 33, 14378-14386
48. Iwata, S.; Barber, J. Curr. Opin. Struct. Biol. 2004, 14, 447-453
49. Ferreira, K. N.; Iverson, T. M.; Maghlaoui, K.; Barber, J.; Iwata, S. Science 2004, 303, 1831-1838
50. Ishikita, H.; Knapp, E.-W. J. Biol. Chem. 2005, 280, 12446-12450
51. Service, R. J.; Hillier, W.; Debus, R. J. Biochemistry 2010, 49, 6655-6669
52. Vassiliev, S.; Comte, P.; Mahboob, A.; Bruce, D. Biochemistry 2010, 49, 1873-1881
53. Okubo, T.; Tomo, T.; Sugiura, M.; Noguchi, T. Biochemistry 2007, 46, 4390-4397
54. Plato, M.; Krauss, N.; Fromme, P.; Lubitz, W. Chem. Phys. 2003, 294, 483-499
55. Takahashi, R.; Hasegawa, K.; Noguchi, T. Biochemistry 2008, 47, 6289-6291
56. Müh, F.; Lendzian, F.; Roy, M.; Williams, J. C.; Allen, J. P.; Lubitz, W. J. Phys. Chem. B 2002, 106, 3226-3236
57. Manna, P.; LoBrutto, R.; Eijckelhoff, C.; Dekker, J. P.; Vermaas, W. Eur. J. Biochem. 1998, 251, 142-154
58. Ermakova-Gerdes, S.; Yu, Z.; Vermaas, W. J. Bacteriol. 2001, 183, 145-154
59. Ishikita, H.; Knapp, E. W. Biophys. J. 2006, 90, 3886-3896
60. Ishikita, H.; Saenger, W.; Loll, B.; Biesiadka, J.; Knapp, E.-W. Biochemistry 2006, 45, 2063-2071
61. Chu, H.; Nguyen, A. P.; Debus, R. J. Biochemistry 1995, 34, 5839-5858
62. Debus, R. J.; Campbell, K. A.; Pham, D. P.; Hays, A. M.; Britt, R. D. Biochemistry 2000, 39, 6275-6287
63. Muegge, I.; Apostolakis, J.; Ermler, U.; Fritzsch, G.; Lubitz, W.; Knapp, E.-W. Biochemistry 1996, 35, 8359-8370
64. Yamasaki, H.; Takano, Y.; Nakamura, H. J. Phys. Chem. B 2008, 112, 13923-13933
65. Witt, H.; Schlodder, E.; Teutloff, C.; Niklas, J.; Bordignon, E.; Carbonera, D.; Kohler, S.; Labahn, A.; Lubitz, W. Biochemistry 2002, 41, 8557-8569
66. Nixon, P. J.; Diner, B. A. Biochemistry 1992, 31, 942-948
67. Higgins, D. G.; Thompson, J. D.; Gibson, T. J. Methods Enzymol. 1996, 266, 383-402