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Volumn 172, Issue , 2013, Pages 37-42

How does overcoordination create ion selectivity?

Author keywords

Ion selectivity; Molecular dynamics simulation; Overcoordination

Indexed keywords

FORMALDEHYDE; FORMAMIDE; LITHIUM ION; POTASSIUM ION; SODIUM ION; WATER;

EID: 84872571270     PISSN: 03014622     EISSN: 18734200     Source Type: Journal    
DOI: 10.1016/j.bpc.2012.11.005     Document Type: Article
Times cited : (6)

References (39)
  • 2
    • 0021222501 scopus 로고
    • + channels of bovine chromaffin cells
    • + channels of bovine chromaffin cells Journal of General Physiology 84 1984 157 186 (Pubitemid 14057601)
    • (1984) Journal of General Physiology , vol.84 , Issue.2 , pp. 157-186
    • Yellen, G.1
  • 3
    • 0027484056 scopus 로고
    • + channel
    • L. Heginbotham, and R. MacKinnon Conduction properties of the cloned Shaker channel Biophysical Journal 65 1993 2089 2096 (Pubitemid 23334876)
    • (1993) Biophysical Journal , vol.65 , Issue.5 , pp. 2089-2096
    • Heginbotham, L.1    MacKinnon, R.2
  • 6
    • 70449252824 scopus 로고
    • The penetration of some cations into muscle
    • L.J. Mullins The penetration of some cations into muscle Journal of General Physiology 42 1959 817 829
    • (1959) Journal of General Physiology , vol.42 , pp. 817-829
    • Mullins, L.J.1
  • 7
    • 0010835119 scopus 로고
    • An analysis of conductance changes in squid axon
    • L. Mullins An analysis of conductance changes in squid axon Journal of General Physiology 42 1959 1013 1035
    • (1959) Journal of General Physiology , vol.42 , pp. 1013-1035
    • Mullins, L.1
  • 8
    • 10344257941 scopus 로고
    • An analysis of pore size in excitable membranes
    • L. Mullins An analysis of pore size in excitable membranes Journal of General Physiology 43 1960 105 117
    • (1960) Journal of General Physiology , vol.43 , pp. 105-117
    • Mullins, L.1
  • 9
    • 0015424492 scopus 로고
    • Negative conductance caused by entry of sodium and cesium ions into the potassium channels of squid axons
    • F. Bezanilla, and C. Armstrong Negative conductance caused by entry of sodium and cesium ions into the potassium channels of squid axons Journal of General Physiology 60 1972 588 608
    • (1972) Journal of General Physiology , vol.60 , pp. 588-608
    • Bezanilla, F.1    Armstrong, C.2
  • 11
    • 73049154846 scopus 로고
    • Cation selective glass electrodes and their mode of operation
    • G. Eisenman Cation selective glass electrodes and their mode of operation Biophysical Journal 2 1962 259 323
    • (1962) Biophysical Journal , vol.2 , pp. 259-323
    • Eisenman, G.1
  • 12
    • 0343619924 scopus 로고
    • Ion-selective properties of a small ionophore in methanol studied by free energy perturbation simulations
    • J. Åqvist, O. Alvarez, and G. Eisenman Ion-selective properties of a small ionophore in methanol studied by free energy perturbation simulations Journal of Physical Chemistry 96 1992 10019 10025
    • (1992) Journal of Physical Chemistry , vol.96 , pp. 10019-10025
    • Åqvist, J.1    Alvarez, O.2    Eisenman, G.3
  • 13
    • 7244251461 scopus 로고    scopus 로고
    • Control of ion selectivity in potassium channels by electrostatic and dynamic properties of carbonyl ligands
    • DOI 10.1038/nature02943
    • S. Noskov, S. Bernèche, and B. Roux Control of ion selectivity in potassium channels by electrostatic and dynamic properties of carbonyl ligands Nature 431 2004 830 834 (Pubitemid 39434076)
    • (2004) Nature , vol.431 , Issue.7010 , pp. 830-834
    • Noskov, S.Y.1    Berneche, S.2    Roux, B.3
  • 14
    • 33750609826 scopus 로고    scopus 로고
    • Ion selectivity in potassium channels
    • DOI 10.1016/j.bpc.2006.05.033, PII S0301462206001803
    • S. Noskov, and B. Roux Ion selectivity in potassium channels Biophysical Chemistry 124 2006 279 291 (Pubitemid 44692364)
    • (2006) Biophysical Chemistry , vol.124 , Issue.3 , pp. 279-291
    • Noskov, S.Yu.1    Roux, B.2
  • 15
    • 78650546908 scopus 로고    scopus 로고
    • Two mechanisms of ion selectivity in protein binding sites
    • H. Yu, S. Noskov, and B. Roux Two mechanisms of ion selectivity in protein binding sites Proc. Natl. Acad. Sci. U. S. A. 107 2010 20329 20334
    • (2010) Proc. Natl. Acad. Sci. U. S. A. , vol.107 , pp. 20329-20334
    • Yu, H.1    Noskov, S.2    Roux, B.3
  • 17
    • 78651253888 scopus 로고    scopus 로고
    • Mapping the importance of four factors in creating monovalent ion selectivity in biological molecules
    • M. Thomas, D. Jayatilaka, and B. Corry Mapping the importance of four factors in creating monovalent ion selectivity in biological molecules Biophysical Journal 100 2011 60 69
    • (2011) Biophysical Journal , vol.100 , pp. 60-69
    • Thomas, M.1    Jayatilaka, D.2    Corry, B.3
  • 19
    • 79956147579 scopus 로고    scopus 로고
    • Origins of ion selectivity in potassium channels from the perspective of channel block
    • C. Nimigean, and T. Allen Origins of ion selectivity in potassium channels from the perspective of channel block Journal of General Physiology 137 2011 405 413
    • (2011) Journal of General Physiology , vol.137 , pp. 405-413
    • Nimigean, C.1    Allen, T.2
  • 20
    • 81055126297 scopus 로고    scopus 로고
    • On the selective ion binding hypothesis for potassium channels
    • I. Kim, and T. Allen On the selective ion binding hypothesis for potassium channels Proc. Natl. Acad. Sci. U. S. A. 108 2011 17963 17968
    • (2011) Proc. Natl. Acad. Sci. U. S. A. , vol.108 , pp. 17963-17968
    • Kim, I.1    Allen, T.2
  • 21
    • 35348997382 scopus 로고    scopus 로고
    • The predominant role of coordination number in potassium channel selectivity
    • DOI 10.1529/biophysj.107.108167
    • M. Thomas, D. Jayatilaka, and B. Corry The predominant role of coordination number in potassium channel selectivity Biophysical Journal 93 2007 2635 2643 (Pubitemid 47607801)
    • (2007) Biophysical Journal , vol.93 , Issue.8 , pp. 2635-2643
    • Thomas, M.1    Jayatilaka, D.2    Corry, B.3
  • 24
    • 67650510671 scopus 로고    scopus 로고
    • + selectivity in potassium channels
    • + selectivity in potassium channels JACS 131 2009 8092 8101
    • (2009) JACS , vol.131 , pp. 8092-8101
    • Dudev, T.1    Lim, C.2
  • 25
    • 67649205728 scopus 로고    scopus 로고
    • Hydration number, topological control, and ion selectivity
    • H. Yu, S. Noskov, and B. Roux Hydration number, topological control, and ion selectivity Journal of Physical Chemistry 113 2009 8725 8730
    • (2009) Journal of Physical Chemistry , vol.113 , pp. 8725-8730
    • Yu, H.1    Noskov, S.2    Roux, B.3
  • 27
    • 34548262701 scopus 로고    scopus 로고
    • Tuning ion coordination architectures to enable selective partitioning
    • DOI 10.1529/biophysj.107.107482
    • S. Varma, and S. Rempe Tuning ion coordination architectures to enable selective partitioning Biophysical Journal 93 2007 1093 1099 (Pubitemid 47330890)
    • (2007) Biophysical Journal , vol.93 , Issue.4 , pp. 1093-1099
    • Varma, S.1    Rempe, S.B.2
  • 28
    • 68049117119 scopus 로고    scopus 로고
    • + selectivity in toy cation binding site models is determined by the 'host'
    • + selectivity in toy cation binding site models is determined by the 'host' Biophysical Journal 96 2009 3887 3896
    • (2009) Biophysical Journal , vol.96 , pp. 3887-3896
    • Bostick, D.L.1    Arora, K.2    Brooks Iii, C.L.3
  • 29
    • 68949144740 scopus 로고    scopus 로고
    • Statistical determinants of selective ionic complexation: Ions in solvent, transport proteins, and other "hosts"
    • D.L. Bostick, K. Arora, and C.L. Brooks III Statistical determinants of selective ionic complexation: ions in solvent, transport proteins, and other "hosts" Biophysical Journal 96 2009 4470 4492
    • (2009) Biophysical Journal , vol.96 , pp. 4470-4492
    • Bostick, D.L.1    Arora, K.2    Brooks Iii, C.L.3
  • 30
    • 77957131188 scopus 로고    scopus 로고
    • + in simple polarizable ion-ligating systems
    • + in simple polarizable ion-ligating systems JACS 132 2010 13185 13187
    • (2010) JACS , vol.132 , pp. 13185-13187
    • Bostick, D.L.1    Brooks Iii, C.L.2
  • 33
    • 65949103611 scopus 로고    scopus 로고
    • Ion selectivity in the KcsA potassium channel from the perspective of the ion binding site
    • P.D. Dixit, S. Merchant, and D. Asthagiri Ion selectivity in the KcsA potassium channel from the perspective of the ion binding site Biophysical Journal 96 2009 2138 2145
    • (2009) Biophysical Journal , vol.96 , pp. 2138-2145
    • Dixit, P.D.1    Merchant, S.2    Asthagiri, D.3
  • 34
    • 79953872674 scopus 로고    scopus 로고
    • The role of bulk protein in local models of ion-binding to protein: Comparative study of KcsA, its semisynthetic analogue with a locked-in binding site and valinomycin
    • P.D. Dixit, and D. Asthagiri The role of bulk protein in local models of ion-binding to protein: comparative study of KcsA, its semisynthetic analogue with a locked-in binding site and valinomycin Biophysical Journal 100 2011 1542 1549
    • (2011) Biophysical Journal , vol.100 , pp. 1542-1549
    • Dixit, P.D.1    Asthagiri, D.2
  • 36
    • 49449085241 scopus 로고    scopus 로고
    • Determination of alkali and halide monovalent ion parameters for use in explicitly solvated biomolecular simulations
    • I.S. Joung, and T.E. Cheatham III Determination of alkali and halide monovalent ion parameters for use in explicitly solvated biomolecular simulations The Journal of Physical Chemistry. B 112 2008 9020 9041
    • (2008) The Journal of Physical Chemistry. B , vol.112 , pp. 9020-9041
    • Joung, I.S.1    Cheatham Iii, T.E.2
  • 38
    • 0348244547 scopus 로고    scopus 로고
    • All-atom empirical force field for nucleic acids: 1. Parameter organisation based on small molecule and condensed phase macromolecular target data
    • N. Foloppe, and A.D. MacKerell Jr. All-atom empirical force field for nucleic acids: 1. Parameter organisation based on small molecule and condensed phase macromolecular target data J. Comput. Chem. 21 2000 86 104
    • (2000) J. Comput. Chem. , vol.21 , pp. 86-104
    • Foloppe, N.1    Mackerell Jr., A.D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.