메뉴 건너뛰기




Volumn 96, Issue 10, 2009, Pages 3887-3896

K+/Na+ selectivity in toy cation binding site models is determined by the 'host'

Author keywords

[No Author keywords available]

Indexed keywords

CATION; POTASSIUM; POTASSIUM CHANNEL; SODIUM; LIGAND; SOLVENT; WATER;

EID: 68049117119     PISSN: 00063495     EISSN: 15420086     Source Type: Journal    
DOI: 10.1016/j.bpj.2008.12.3963     Document Type: Article
Times cited : (22)

References (28)
  • 1
    • 34250333069 scopus 로고    scopus 로고
    • + channels is due to topological control of the permeant ion's coordinated state
    • + channels is due to topological control of the permeant ion's coordinated state. Proc. Natl. Acad. Sci. USA. 104:9260-9265.
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 9260-9265
    • Bostick, D.L.1    Brooks III, C.L.2
  • 2
    • 68949144740 scopus 로고    scopus 로고
    • Bostick, D. L., and C. L. Brooks, III. 2008. The statistical determinants of selective ionic complexation: ions in solvent, transport proteins, and other hosts. Biophys. J. 96: in press.
    • Bostick, D. L., and C. L. Brooks, III. 2008. The statistical determinants of selective ionic complexation: ions in solvent, transport proteins, and other hosts. Biophys. J. 96: in press.
  • 3
    • 38049095537 scopus 로고    scopus 로고
    • + selectivity in K channels and valinomycin: Over-coordination versus cavity-size constraints
    • + selectivity in K channels and valinomycin: over-coordination versus cavity-size constraints. J. Mol. Biol. 376:13-22.
    • (2008) J. Mol. Biol , vol.376 , pp. 13-22
    • Varma, S.1    Sabo, D.2    Rempe, S.B.3
  • 4
    • 34548262701 scopus 로고    scopus 로고
    • Tuning ion coordination architectures to enable selective partitioning
    • Varma, S., and S. B. Rempe. 2007. Tuning ion coordination architectures to enable selective partitioning. Biophys. J. 93:1093-1099.
    • (2007) Biophys. J , vol.93 , pp. 1093-1099
    • Varma, S.1    Rempe, S.B.2
  • 5
    • 56449119366 scopus 로고    scopus 로고
    • Structural transitions in ion coordination driven by changes in competition for ligand binding
    • Varma, S., and S. B. Rempe. 2008. Structural transitions in ion coordination driven by changes in competition for ligand binding. J. Am. Chem. Soc. 130:15405-15419.
    • (2008) J. Am. Chem. Soc , vol.130 , pp. 15405-15419
    • Varma, S.1    Rempe, S.B.2
  • 6
    • 85031361633 scopus 로고    scopus 로고
    • Reference deleted in proof
    • Reference deleted in proof.
  • 7
    • 0018446914 scopus 로고
    • The nature of the liquid-vapor interface and other topics in the statistical mechanics of non-uniform, classical fluids
    • Evans, R. 1979. The nature of the liquid-vapor interface and other topics in the statistical mechanics of non-uniform, classical fluids. Adv. Phys. 28:143-200.
    • (1979) Adv. Phys , vol.28 , pp. 143-200
    • Evans, R.1
  • 10
    • 85031362795 scopus 로고    scopus 로고
    • Reference deleted in proof
    • Reference deleted in proof.
  • 11
    • 34250313708 scopus 로고    scopus 로고
    • On the equivalence point for ammonium (De)protonation during its transport through the AmtB channel
    • Bostick, D. L., and C. L. Brooks, III. 2007. On the equivalence point for ammonium (De)protonation during its transport through the AmtB channel. Biophys. J. 92:L103-L105.
    • (2007) Biophys. J , vol.92
    • Bostick, D.L.1    Brooks III, C.L.2
  • 12
    • 7244251461 scopus 로고    scopus 로고
    • Control of ion selectivity in potassium channels by electrostatic and dynamic properties of carbonyl ligands
    • Noskov, S. Y., S. Bernèche, and B. Roux. 2004. Control of ion selectivity in potassium channels by electrostatic and dynamic properties of carbonyl ligands. Nature. 431:830-834.
    • (2004) Nature , vol.431 , pp. 830-834
    • Noskov, S.Y.1    Bernèche, S.2    Roux, B.3
  • 13
    • 33750609826 scopus 로고    scopus 로고
    • Ion selectivity in potassium channels
    • Noskov, S. Y., and B. Roux. 2006. Ion selectivity in potassium channels. Biophys. Chem. 124:279-291.
    • (2006) Biophys. Chem , vol.124 , pp. 279-291
    • Noskov, S.Y.1    Roux, B.2
  • 14
    • 33846625994 scopus 로고    scopus 로고
    • Importance of hydration and dynamics on the selectivity of the KcsA and NaK channels
    • Noskov, S. Y., and B. Roux. 2007. Importance of hydration and dynamics on the selectivity of the KcsA and NaK channels. J. Gen. Physiol. 129:135-143.
    • (2007) J. Gen. Physiol , vol.129 , pp. 135-143
    • Noskov, S.Y.1    Roux, B.2
  • 15
    • 73049154846 scopus 로고
    • Cation selective electrodes and their mode of operation
    • Eisenman, G. 1962. Cation selective electrodes and their mode of operation. Biophys. J. 2:259-323.
    • (1962) Biophys. J , vol.2 , pp. 259-323
    • Eisenman, G.1
  • 16
    • 0021070747 scopus 로고
    • Ionic selectivity revisited: The role of kinetic and equilibrium processes in ion permeation through channels
    • Eisenman, G., and R. Horn. 1983. Ionic selectivity revisited: the role of kinetic and equilibrium processes in ion permeation through channels. J. Membr. Biol. 76:197-225.
    • (1983) J. Membr. Biol , vol.76 , pp. 197-225
    • Eisenman, G.1    Horn, R.2
  • 17
    • 0343619924 scopus 로고
    • Ion-selective properties of a small ionophore in methanol studied by free energy perturbation simulations
    • Åqvist, J., O. Alvarez, and G. Eisenman. 1992. Ion-selective properties of a small ionophore in methanol studied by free energy perturbation simulations. J. Phys. Chem. 96:10019-10025.
    • (1992) J. Phys. Chem , vol.96 , pp. 10019-10025
    • Åqvist, J.1    Alvarez, O.2    Eisenman, G.3
  • 18
    • 35348997382 scopus 로고    scopus 로고
    • The predominant role of coordination number in potassium channel selectivity
    • Thomas, M., D. Jayatilaka, and B. Corry. 2007. The predominant role of coordination number in potassium channel selectivity. Biophys. J. 93:2635-2643.
    • (2007) Biophys. J , vol.93 , pp. 2635-2643
    • Thomas, M.1    Jayatilaka, D.2    Corry, B.3
  • 20
    • 0036836445 scopus 로고    scopus 로고
    • A reappraisal of what we have learnt during three decades of computer simulations on water
    • Guillot, B. 2002. A reappraisal of what we have learnt during three decades of computer simulations on water. J. Mol. Liq. 101:219-260.
    • (2002) J. Mol. Liq , vol.101 , pp. 219-260
    • Guillot, B.1
  • 21
    • 34547268706 scopus 로고    scopus 로고
    • Dipolar correlations and the dielectric permittivity of water
    • Sharma, M., R. Resta, and R. Car. 2007. Dipolar correlations and the dielectric permittivity of water. Phys. Rev. Lett. 98:247401.
    • (2007) Phys. Rev. Lett , vol.98 , pp. 247401
    • Sharma, M.1    Resta, R.2    Car, R.3
  • 23
    • 0037899660 scopus 로고    scopus 로고
    • Polarizable atomic multipole water model for molecular mechanics simulation
    • Ren, P., and J. W. Ponder. 2003. Polarizable atomic multipole water model for molecular mechanics simulation. J. Phys. Chem. B. 107:5933-5947.
    • (2003) J. Phys. Chem. B , vol.107 , pp. 5933-5947
    • Ren, P.1    Ponder, J.W.2
  • 24
    • 33746094645 scopus 로고    scopus 로고
    • Role of fluctuations in a snug-fit mechanism of KcsA channel selectivity
    • Asthagiri, D., and L. R. Pratt. 2006. Role of fluctuations in a snug-fit mechanism of KcsA channel selectivity. J. Chem. Phys. 125: 024701.
    • (2006) J. Chem. Phys , vol.125 , pp. 024701
    • Asthagiri, D.1    Pratt, L.R.2
  • 26
    • 55949109148 scopus 로고    scopus 로고
    • Conformational changes in the selectivity filter of the open-state KcsA channel: An energy minimization study
    • Miloshevsky, G. V., and P. C. Jordan. 2008. Conformational changes in the selectivity filter of the open-state KcsA channel: an energy minimization study. Biophys. J. 95:3239-3251.
    • (2008) Biophys. J , vol.95 , pp. 3239-3251
    • Miloshevsky, G.V.1    Jordan, P.C.2
  • 27
    • 31544436643 scopus 로고    scopus 로고
    • Incidence of partial charges on ion selectivity in potassium channels
    • Huetz, P., C. Boiteux, M. Compoint, C. Ramseyer, and C. Girardet. 2006. Incidence of partial charges on ion selectivity in potassium channels. J. Chem. Phys. 124: 044703.
    • (2006) J. Chem. Phys , vol.124 , pp. 044703
    • Huetz, P.1    Boiteux, C.2    Compoint, M.3    Ramseyer, C.4    Girardet, C.5
  • 28
    • 34547889165 scopus 로고    scopus 로고
    • Hydration free energies of monovalent ions in transferable intermolecular potential four point fluctuating charge water: An assessment of simulation methodology and force field performance and transferability
    • Warren, G. L., and S. Patel. 2007. Hydration free energies of monovalent ions in transferable intermolecular potential four point fluctuating charge water: an assessment of simulation methodology and force field performance and transferability. J. Chem. Phys. 127: 064509.
    • (2007) J. Chem. Phys , vol.127 , pp. 064509
    • Warren, G.L.1    Patel, S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.